RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 LGALS9BQ3B8N2 356 aa12.87□□□□□ -0.35
H2AFX-201ENST00000375167 PDPNQ86YL7 162 aa12.87□□□□□ -0.35
H2AFX-201ENST00000375167 TMEM61Q8N0U2 210 aa12.87□□□□□ -0.35
H2AFX-201ENST00000375167 GDPD1Q8N9F7 314 aa12.87□□□□□ -0.35
H2AFX-201ENST00000375167 OR5T1Q8NG75 326 aa12.87□□□□□ -0.35
H2AFX-201ENST00000375167 GIMAP1Q8WWP7 306 aa12.87□□□□□ -0.35
H2AFX-201ENST00000375167 ADTRPQ96IZ2 230 aa12.87□□□□□ -0.35
H2AFX-201ENST00000375167 CLCC1Q96S66 551 aa12.87□□□□□ -0.35
H2AFX-201ENST00000375167 C11orf68Q9H3H3 251 aaKnown RBP12.87□□□□□ -0.35
H2AFX-201ENST00000375167 APOBP04114 4563 aaKnown RBP12.87□□□□□ -0.35
H2AFX-201ENST00000375167 LRP1BQ9NZR2 4599 aa12.87□□□□□ -0.35
H2AFX-201ENST00000375167 C2orf70A6NJV1 201 aa12.86□□□□□ -0.35
H2AFX-201ENST00000375167 IGKV1-16P04430 117 aa12.86□□□□□ -0.35
H2AFX-201ENST00000375167 S100GP29377 79 aa12.86□□□□□ -0.35
H2AFX-201ENST00000375167 DUTP33316 252 aaKnown RBP12.86□□□□□ -0.35
H2AFX-201ENST00000375167 TM4SF20Q53R12 229 aa12.86□□□□□ -0.35
H2AFX-201ENST00000375167 RNASE10Q5GAN6 216 aaKnown RBP12.86□□□□□ -0.35
H2AFX-201ENST00000375167 LYSMD2Q8IV50 215 aa12.86□□□□□ -0.35
H2AFX-201ENST00000375167 POM121L12Q8N7R1 296 aa12.86□□□□□ -0.35
H2AFX-201ENST00000375167 OR6F1Q8NGZ6 308 aa12.86□□□□□ -0.35
H2AFX-201ENST00000375167 OR52I2Q8NH67 350 aa12.86□□□□□ -0.35
H2AFX-201ENST00000375167 USMG5Q96IX5 58 aa12.86□□□□□ -0.35
H2AFX-201ENST00000375167 SLC35D1Q9NTN3 355 aa12.86□□□□□ -0.35
H2AFX-201ENST00000375167 EHFQ9NZC4 300 aa12.86□□□□□ -0.35
H2AFX-201ENST00000375167 CA2P00918 260 aa12.85□□□□□ -0.35
H2AFX-201ENST00000375167 PPYP01298 95 aa12.85□□□□□ -0.35
H2AFX-201ENST00000375167 IGLV2-14P01704 120 aa12.85□□□□□ -0.35
H2AFX-201ENST00000375167 RRASP10301 218 aa12.85□□□□□ -0.35
H2AFX-201ENST00000375167 RFX2P48378 723 aa12.85□□□□□ -0.35
H2AFX-201ENST00000375167 HERV-K104P61576 105 aa12.85□□□□□ -0.35
H2AFX-201ENST00000375167 RTL8BQ17RB0 113 aa12.85□□□□□ -0.35
H2AFX-201ENST00000375167 TRIQKQ629K1 86 aa12.85□□□□□ -0.35
H2AFX-201ENST00000375167 DHRS11Q6UWP2 260 aa12.85□□□□□ -0.35
H2AFX-201ENST00000375167 ARRDC1Q8N5I2 433 aa12.85□□□□□ -0.35
H2AFX-201ENST00000375167 TMEM229BQ8NBD8 167 aa12.85□□□□□ -0.35
H2AFX-201ENST00000375167 TSNAXQ99598 290 aaKnown RBP12.85□□□□□ -0.35
H2AFX-201ENST00000375167 SOSTQ9BQB4 213 aa12.85□□□□□ -0.35
H2AFX-201ENST00000375167 WDR12Q9GZL7 423 aaKnown RBP12.85□□□□□ -0.35
H2AFX-201ENST00000375167 KLK11Q9UBX7 282 aa12.85□□□□□ -0.35
H2AFX-201ENST00000375167 RBMX2Q9Y388 322 aaKnown RBP12.85□□□□□ -0.35
H2AFX-201ENST00000375167 BMPR1BO00238 502 aa12.84□□□□□ -0.35
H2AFX-201ENST00000375167 PMP2P02689 132 aa12.84□□□□□ -0.35
H2AFX-201ENST00000375167 HLA-DMAP28067 261 aa12.84□□□□□ -0.35
H2AFX-201ENST00000375167 HRH1P35367 487 aa12.84□□□□□ -0.35
H2AFX-201ENST00000375167 LGALS7P47929 136 aa12.84□□□□□ -0.35
H2AFX-201ENST00000375167 CBX3Q13185 183 aa12.84□□□□□ -0.35
H2AFX-201ENST00000375167 MSMO1Q15800 293 aa12.84□□□□□ -0.35
H2AFX-201ENST00000375167 ZNF57Q68EA5 555 aaPredicted RBP12.84□□□□□ -0.35
H2AFX-201ENST00000375167 LPCAT3Q6P1A2 487 aa12.84□□□□□ -0.35
H2AFX-201ENST00000375167 V9GYH0 126 aa12.84□□□□□ -0.35
H2AFX-201ENST00000375167 LINC00473A8K010 186 aa12.83□□□□□ -0.36
H2AFX-201ENST00000375167 SPDEFO95238 335 aa12.83□□□□□ -0.36
H2AFX-201ENST00000375167 AKAIN1P0CW23 69 aa12.83□□□□□ -0.36
H2AFX-201ENST00000375167 EDN2P20800 178 aa12.83□□□□□ -0.36
H2AFX-201ENST00000375167 PSG5Q15238 335 aa12.83□□□□□ -0.36
H2AFX-201ENST00000375167 RNASE12Q5GAN4 147 aaKnown RBP12.83□□□□□ -0.36
H2AFX-201ENST00000375167 TOMM5Q8N4H5 51 aa12.83□□□□□ -0.36
H2AFX-201ENST00000375167 SECTM1Q8WVN6 248 aa12.83□□□□□ -0.36
H2AFX-201ENST00000375167 HSD17B10Q99714 261 aaKnown RBP12.83□□□□□ -0.36
H2AFX-201ENST00000375167 METTL1Q9UBP6 276 aaKnown RBP12.83□□□□□ -0.36
H2AFX-201ENST00000375167 SELENOKQ9Y6D0 94 aa12.83□□□□□ -0.36
H2AFX-201ENST00000375167 CENPXA8MT69 81 aa12.82□□□□□ -0.36
H2AFX-201ENST00000375167 DISC1C4P0D8 188 aa12.82□□□□□ -0.36
H2AFX-201ENST00000375167 SCAF4O95104 1147 aaKnown RBP12.82□□□□□ -0.36
H2AFX-201ENST00000375167 FXYD4P59646 89 aa12.82□□□□□ -0.36
H2AFX-201ENST00000375167 EIF4EBP1Q13541 118 aaPredicted RBP12.82□□□□□ -0.36
H2AFX-201ENST00000375167 FXYD3Q14802 87 aa12.82□□□□□ -0.36
H2AFX-201ENST00000375167 STEAP1BQ6NZ63 245 aa12.82□□□□□ -0.36
H2AFX-201ENST00000375167 ZBTB34Q8NCN2 500 aa12.82□□□□□ -0.36
H2AFX-201ENST00000375167 PRRT1Q99946 306 aa12.82□□□□□ -0.36
H2AFX-201ENST00000375167 RARRES2Q99969 163 aa12.82□□□□□ -0.36
H2AFX-201ENST00000375167 CCDC32Q9BV29 185 aa12.82□□□□□ -0.36
H2AFX-201ENST00000375167 SLC5A7Q9GZV3 580 aa12.82□□□□□ -0.36
H2AFX-201ENST00000375167 CCL28Q9NRJ3 127 aa12.82□□□□□ -0.36
H2AFX-201ENST00000375167 PRELID3BQ9Y3B1 194 aa12.82□□□□□ -0.36
H2AFX-201ENST00000375167 IGHV4-4A0A075B6R2 117 aa12.81□□□□□ -0.36
H2AFX-201ENST00000375167 RAB3DO95716 219 aa12.81□□□□□ -0.36
H2AFX-201ENST00000375167 P0DMU3 169 aa12.81□□□□□ -0.36
H2AFX-201ENST00000375167 FAM231AP0DMU4 169 aa12.81□□□□□ -0.36
H2AFX-201ENST00000375167 FAM231CP0DMU5 169 aa12.81□□□□□ -0.36
H2AFX-201ENST00000375167 RPL30P62888 115 aaKnown RBP12.81□□□□□ -0.36
H2AFX-201ENST00000375167 ZNF846Q147U1 533 aa12.81□□□□□ -0.36
H2AFX-201ENST00000375167 ZNF66Q6ZN08 573 aa12.81□□□□□ -0.36
H2AFX-201ENST00000375167 KCTD9Q7L273 389 aa12.81□□□□□ -0.36
H2AFX-201ENST00000375167 CMTM1Q8IZ96 169 aa12.81□□□□□ -0.36
H2AFX-201ENST00000375167 ZNF2Q9BSG1 426 aaPredicted RBP12.81□□□□□ -0.36
H2AFX-201ENST00000375167 COA4Q9NYJ1 87 aa12.81□□□□□ -0.36
H2AFX-201ENST00000375167 SCP2D1Q9UJQ7 156 aa12.81□□□□□ -0.36
H2AFX-201ENST00000375167 IGLV2-23P01705 113 aa12.81□□□□□ -0.36
H2AFX-201ENST00000375167 CD74P04233 296 aa12.81□□□□□ -0.36
H2AFX-201ENST00000375167 INAFM2P0DMQ5 153 aa12.81□□□□□ -0.36
H2AFX-201ENST00000375167 FCGR2BP31994 310 aaPredicted RBP12.81□□□□□ -0.36
H2AFX-201ENST00000375167 PVRIGQ6DKI7 326 aa12.81□□□□□ -0.36
H2AFX-201ENST00000375167 MFSD4AQ8N468 514 aa12.81□□□□□ -0.36
H2AFX-201ENST00000375167 OR1L6Q8NGR2 347 aa12.81□□□□□ -0.36
H2AFX-201ENST00000375167 OSR1Q8TAX0 266 aaPredicted RBP12.81□□□□□ -0.36
H2AFX-201ENST00000375167 MOB3AQ96BX8 217 aa12.81□□□□□ -0.36
H2AFX-201ENST00000375167 HARBI1Q96MB7 349 aa12.81□□□□□ -0.36
H2AFX-201ENST00000375167 SCGB3A2Q96PL1 93 aa12.81□□□□□ -0.36
H2AFX-201ENST00000375167 SRRQ9GZT4 340 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms