RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 CDKN1AP38936 164 aa15.83■□□□□ 0.13
HDAC1-201ENST00000373548 OR10W1Q8NGF6 305 aa15.83■□□□□ 0.13
HDAC1-201ENST00000373548 VSTM2AQ8TAG5 236 aa15.83■□□□□ 0.13
HDAC1-201ENST00000373548 RITA1Q96K30 269 aa15.83■□□□□ 0.13
HDAC1-201ENST00000373548 ACTR3CQ9C0K3 210 aaPredicted RBP15.83■□□□□ 0.13
HDAC1-201ENST00000373548 COMMD5Q9GZQ3 224 aa15.83■□□□□ 0.13
HDAC1-201ENST00000373548 UBTD1Q9HAC8 227 aa15.83■□□□□ 0.13
HDAC1-201ENST00000373548 NDUFA4L2Q9NRX3 87 aa15.83■□□□□ 0.13
HDAC1-201ENST00000373548 ONECUT1Q9UBC0 465 aa15.83■□□□□ 0.13
HDAC1-201ENST00000373548 LSM4Q9Y4Z0 139 aaKnown RBP15.83■□□□□ 0.13
HDAC1-201ENST00000373548 BUB1B-PAK6H3BSN5 160 aa15.83■□□□□ 0.12
HDAC1-201ENST00000373548 DEFA4P12838 97 aa15.83■□□□□ 0.12
HDAC1-201ENST00000373548 BSXQ3C1V8 233 aa15.83■□□□□ 0.12
HDAC1-201ENST00000373548 ACOT6Q3I5F7 207 aaPredicted RBP15.83■□□□□ 0.12
HDAC1-201ENST00000373548 RAB24Q969Q5 203 aa15.83■□□□□ 0.12
HDAC1-201ENST00000373548 C20orf24Q9BUV8 137 aa15.83■□□□□ 0.12
HDAC1-201ENST00000373548 GGTLC1Q9BX51 225 aa15.83■□□□□ 0.12
HDAC1-201ENST00000373548 UNKLQ9H9P5 680 aaKnown RBP15.83■□□□□ 0.12
HDAC1-201ENST00000373548 NPVFQ9HCQ7 196 aa15.83■□□□□ 0.12
HDAC1-201ENST00000373548 E7EUB6 86 aa15.82■□□□□ 0.12
HDAC1-201ENST00000373548 M0R036 132 aa15.82■□□□□ 0.12
HDAC1-201ENST00000373548 ATF4P18848 351 aaPredicted RBP15.82■□□□□ 0.12
HDAC1-201ENST00000373548 OPRK1P41145 380 aa15.82■□□□□ 0.12
HDAC1-201ENST00000373548 AKR1C3P42330 323 aa15.82■□□□□ 0.12
HDAC1-201ENST00000373548 CEBPGP53567 150 aa15.82■□□□□ 0.12
HDAC1-201ENST00000373548 PMS2P11Q13670 270 aa15.82■□□□□ 0.12
HDAC1-201ENST00000373548 OR4P4Q8NGL7 312 aa15.82■□□□□ 0.12
HDAC1-201ENST00000373548 OR1L8Q8NGR8 309 aa15.82■□□□□ 0.12
HDAC1-201ENST00000373548 ZFYVE26Q68DK2 2539 aa15.82■□□□□ 0.12
HDAC1-201ENST00000373548 hCG_1809904A0A1W2PP81 198 aa15.82■□□□□ 0.12
HDAC1-201ENST00000373548 A0A1W2PPE2 198 aa15.82■□□□□ 0.12
HDAC1-201ENST00000373548 A0A1W2PR64 198 aa15.82■□□□□ 0.12
HDAC1-201ENST00000373548 A0A1W2PRV1 198 aa15.82■□□□□ 0.12
HDAC1-201ENST00000373548 C7orf77A4D0Y5 90 aa15.82■□□□□ 0.12
HDAC1-201ENST00000373548 NDUFS7O75251 213 aa15.82■□□□□ 0.12
HDAC1-201ENST00000373548 SNRNP70P08621 437 aaKnown RBP15.82■□□□□ 0.12
HDAC1-201ENST00000373548 RNASE2P10153 161 aaKnown RBP15.82■□□□□ 0.12
HDAC1-201ENST00000373548 C2orf83Q53S99 150 aa15.82■□□□□ 0.12
HDAC1-201ENST00000373548 GCSAMLQ5JQS6 135 aa15.82■□□□□ 0.12
HDAC1-201ENST00000373548 ZNF430Q9H8G1 570 aaPredicted RBP15.82■□□□□ 0.12
HDAC1-201ENST00000373548 RPS10P5Q9NQ39 176 aa15.82■□□□□ 0.12
HDAC1-201ENST00000373548 LOC105371267A0A1B0GV96 52 aa15.81■□□□□ 0.12
HDAC1-201ENST00000373548 ENSAO43768 121 aaKnown RBP15.81■□□□□ 0.12
HDAC1-201ENST00000373548 SLC25A17O43808 307 aa15.81■□□□□ 0.12
HDAC1-201ENST00000373548 SOX15O60248 233 aa15.81■□□□□ 0.12
HDAC1-201ENST00000373548 YIF1AO95070 293 aa15.81■□□□□ 0.12
HDAC1-201ENST00000373548 IGFBP2P18065 325 aa15.81■□□□□ 0.12
HDAC1-201ENST00000373548 PNKDQ8N490 385 aa15.81■□□□□ 0.12
HDAC1-201ENST00000373548 SSBP3Q9BWW4 388 aaPredicted RBP15.81■□□□□ 0.12
HDAC1-201ENST00000373548 TMPRSS5Q9H3S3 457 aa15.81■□□□□ 0.12
HDAC1-201ENST00000373548 TPSG1Q9NRR2 321 aa15.81■□□□□ 0.12
HDAC1-201ENST00000373548 PUS1Q9Y606 427 aaKnown RBP eCLIP15.81■□□□□ 0.12
HDAC1-201ENST00000373548 IGHV1-3A0A0C4DH29 117 aa15.8■□□□□ 0.12
HDAC1-201ENST00000373548 CGB1A6NKQ9 187 aa15.8■□□□□ 0.12
HDAC1-201ENST00000373548 A6NNC1 897 aa15.8■□□□□ 0.12
HDAC1-201ENST00000373548 SEC14L6B5MCN3 397 aa15.8■□□□□ 0.12
HDAC1-201ENST00000373548 CYB5BO43169 146 aa15.8■□□□□ 0.12
HDAC1-201ENST00000373548 ATP5IP56385 69 aaPredicted RBP15.8■□□□□ 0.12
HDAC1-201ENST00000373548 VMA21Q3ZAQ7 101 aa15.8■□□□□ 0.12
HDAC1-201ENST00000373548 C10orf55Q5SWW7 151 aa15.8■□□□□ 0.12
HDAC1-201ENST00000373548 MIC13Q5XKP0 118 aa15.8■□□□□ 0.12
HDAC1-201ENST00000373548 VAX2Q9UIW0 290 aa15.8■□□□□ 0.12
HDAC1-201ENST00000373548 PXMP4Q9Y6I8 212 aa15.8■□□□□ 0.12
HDAC1-201ENST00000373548 FNDC10F2Z333 226 aa15.8■□□□□ 0.12
HDAC1-201ENST00000373548 IFNA1P01562 189 aa15.8■□□□□ 0.12
HDAC1-201ENST00000373548 LGALS7P47929 136 aa15.8■□□□□ 0.12
HDAC1-201ENST00000373548 CDC34P49427 236 aaPredicted RBP15.8■□□□□ 0.12
HDAC1-201ENST00000373548 MRGPRG-AS1Q2M3A8 158 aa15.8■□□□□ 0.12
HDAC1-201ENST00000373548 INSIG2Q9Y5U4 225 aa15.8■□□□□ 0.12
HDAC1-201ENST00000373548 INS-IGF2F8WCM5 200 aa15.79■□□□□ 0.12
HDAC1-201ENST00000373548 H3BQ15 152 aa15.79■□□□□ 0.12
HDAC1-201ENST00000373548 ARF6P62330 175 aa15.79■□□□□ 0.12
HDAC1-201ENST00000373548 TEPPQ6URK8 271 aa15.79■□□□□ 0.12
HDAC1-201ENST00000373548 AMMECR1Q9Y4X0 333 aaPredicted RBP15.79■□□□□ 0.12
HDAC1-201ENST00000373548 IGSF10Q6WRI0 2623 aa15.79■□□□□ 0.12
HDAC1-201ENST00000373548 LOC105371242A0A075B767 164 aa15.79■□□□□ 0.12
HDAC1-201ENST00000373548 LY6LH3BQJ8 138 aa15.79■□□□□ 0.12
HDAC1-201ENST00000373548 PLXNB1O43157 2135 aa15.79■□□□□ 0.12
HDAC1-201ENST00000373548 MOB3BQ86TA1 216 aa15.79■□□□□ 0.12
HDAC1-201ENST00000373548 SSMEM1Q8WWF3 244 aa15.79■□□□□ 0.12
HDAC1-201ENST00000373548 SMCO4Q9NRQ5 59 aa15.79■□□□□ 0.12
HDAC1-201ENST00000373548 GPR6P46095 362 aaPredicted RBP15.78■□□□□ 0.12
HDAC1-201ENST00000373548 FAM90A2PQ658T7 463 aa15.78■□□□□ 0.12
HDAC1-201ENST00000373548 RBMS3Q6XE24 437 aaKnown RBP15.78■□□□□ 0.12
HDAC1-201ENST00000373548 SIRT7Q9NRC8 400 aa15.78■□□□□ 0.12
HDAC1-201ENST00000373548 A0A1W2PN81 502 aa15.77■□□□□ 0.12
HDAC1-201ENST00000373548 CHRNA7P36544 502 aa15.77■□□□□ 0.12
HDAC1-201ENST00000373548 ERHP84090 104 aaKnown RBP15.77■□□□□ 0.12
HDAC1-201ENST00000373548 WT1-ASQ06250 92 aa15.77■□□□□ 0.12
HDAC1-201ENST00000373548 RHEBQ15382 184 aa15.77■□□□□ 0.12
HDAC1-201ENST00000373548 LDLRAD2Q5SZI1 272 aa15.77■□□□□ 0.12
HDAC1-201ENST00000373548 RPEQ96AT9 228 aa15.77■□□□□ 0.12
HDAC1-201ENST00000373548 P2RX4Q99571 388 aa15.77■□□□□ 0.12
HDAC1-201ENST00000373548 CNTFRP26992 372 aa15.77■□□□□ 0.11
HDAC1-201ENST00000373548 C17orf50Q8WW18 174 aa15.77■□□□□ 0.11
HDAC1-201ENST00000373548 KCNIP2Q9NS61 270 aa15.77■□□□□ 0.11
HDAC1-201ENST00000373548 NAV3Q8IVL0 2385 aa15.76■□□□□ 0.11
HDAC1-201ENST00000373548 M0R1W7 72 aa15.76■□□□□ 0.11
HDAC1-201ENST00000373548 TEX45Q8NA69 505 aa15.76■□□□□ 0.11
HDAC1-201ENST00000373548 GATAD1Q8WUU5 269 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms