RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 C9orf152Q5JTZ5 239 aa16.72■□□□□ 0.27
SYNC-201ENST00000373484 OR10J5Q8NHC4 309 aa16.72■□□□□ 0.27
SYNC-201ENST00000373484 DCTN5Q9BTE1 182 aa16.72■□□□□ 0.27
SYNC-201ENST00000373484 FAM234AQ9H0X4 552 aa16.72■□□□□ 0.27
SYNC-201ENST00000373484 C7orf69Q9H7B7 122 aa16.72■□□□□ 0.27
SYNC-201ENST00000373484 NAT8Q9UHE5 227 aa16.72■□□□□ 0.27
SYNC-201ENST00000373484 RPUSD1Q9UJJ7 312 aaKnown RBP16.72■□□□□ 0.27
SYNC-201ENST00000373484 CDC42EP3Q9UKI2 254 aa16.72■□□□□ 0.27
SYNC-201ENST00000373484 ZFHX3Q15911 3703 aa16.71■□□□□ 0.27
SYNC-201ENST00000373484 TMEM250H0YL14 139 aa16.71■□□□□ 0.27
SYNC-201ENST00000373484 CRLF1O75462 422 aa16.71■□□□□ 0.27
SYNC-201ENST00000373484 NDUFB7P17568 137 aa16.71■□□□□ 0.27
SYNC-201ENST00000373484 C1orf229Q6ZS94 237 aaPredicted RBP16.71■□□□□ 0.27
SYNC-201ENST00000373484 CYP2G1PQ6ZSU1 146 aa16.71■□□□□ 0.27
SYNC-201ENST00000373484 OR10A7Q8NGE5 316 aa16.71■□□□□ 0.27
SYNC-201ENST00000373484 SH2D1BO14796 132 aa16.7■□□□□ 0.26
SYNC-201ENST00000373484 HNF1AP20823 631 aa16.7■□□□□ 0.26
SYNC-201ENST00000373484 IL17RELQ6ZVW7 336 aa16.7■□□□□ 0.26
SYNC-201ENST00000373484 TMEM183AQ8IXX5 376 aa16.7■□□□□ 0.26
SYNC-201ENST00000373484 LY6G5BQ8NDX9 201 aa16.7■□□□□ 0.26
SYNC-201ENST00000373484 C8orf46Q8TAG6 207 aa16.7■□□□□ 0.26
SYNC-201ENST00000373484 NEK7Q8TDX7 302 aa16.7■□□□□ 0.26
SYNC-201ENST00000373484 H1FXQ92522 213 aaKnown RBP16.7■□□□□ 0.26
SYNC-201ENST00000373484 SMCO3A2RU48 225 aa16.7■□□□□ 0.26
SYNC-201ENST00000373484 LIPFP07098 398 aa16.7■□□□□ 0.26
SYNC-201ENST00000373484 OR10V1Q8NGI7 309 aa16.7■□□□□ 0.26
SYNC-201ENST00000373484 SNX22Q96L94 193 aa16.7■□□□□ 0.26
SYNC-201ENST00000373484 LIN7CQ9NUP9 197 aaKnown RBP16.7■□□□□ 0.26
SYNC-201ENST00000373484 SETD2Q9BYW2 2564 aaPredicted RBP16.69■□□□□ 0.26
SYNC-201ENST00000373484 OR2H2O95918 312 aa16.69■□□□□ 0.26
SYNC-201ENST00000373484 ZNF726P1Q15940 193 aa16.69■□□□□ 0.26
SYNC-201ENST00000373484 Q6P435 159 aa16.69■□□□□ 0.26
SYNC-201ENST00000373484 C14orf144Q96I85 54 aa16.69■□□□□ 0.26
SYNC-201ENST00000373484 PACRGQ96M98 296 aaPredicted RBP16.69■□□□□ 0.26
SYNC-201ENST00000373484 WDR61Q9GZS3 305 aaKnown RBP16.69■□□□□ 0.26
SYNC-201ENST00000373484 PSENENQ9NZ42 101 aa16.69■□□□□ 0.26
SYNC-201ENST00000373484 A0A0G2JRQ6 117 aa16.68■□□□□ 0.26
SYNC-201ENST00000373484 PSPNO60542 156 aa16.68■□□□□ 0.26
SYNC-201ENST00000373484 CEACAM6P40199 344 aa16.68■□□□□ 0.26
SYNC-201ENST00000373484 JOSD1Q15040 202 aaPredicted RBP16.68■□□□□ 0.26
SYNC-201ENST00000373484 ATP6V1FQ16864 119 aa16.68■□□□□ 0.26
SYNC-201ENST00000373484 HIST1H2BLQ99880 126 aa16.68■□□□□ 0.26
SYNC-201ENST00000373484 MXRA5Q9NR99 2828 aa16.68■□□□□ 0.26
SYNC-201ENST00000373484 ZFP92A6NM28 416 aa16.68■□□□□ 0.26
SYNC-201ENST00000373484 SIRPB1O00241 398 aa16.68■□□□□ 0.26
SYNC-201ENST00000373484 MBP02144 154 aa16.68■□□□□ 0.26
SYNC-201ENST00000373484 PPIAL4GP0DN37 164 aa16.68■□□□□ 0.26
SYNC-201ENST00000373484 DDTP30046 118 aa16.68■□□□□ 0.26
SYNC-201ENST00000373484 RNASE11Q8TAA1 199 aaKnown RBP16.68■□□□□ 0.26
SYNC-201ENST00000373484 ACY3Q96HD9 319 aa16.68■□□□□ 0.26
SYNC-201ENST00000373484 ACTR3CQ9C0K3 210 aaPredicted RBP16.68■□□□□ 0.26
SYNC-201ENST00000373484 NF1P21359 2839 aa16.67■□□□□ 0.26
SYNC-201ENST00000373484 MAP1LC3B2A6NCE7 125 aa16.67■□□□□ 0.26
SYNC-201ENST00000373484 RNF212BA8MTL3 300 aa16.67■□□□□ 0.26
SYNC-201ENST00000373484 KBTBD11O94819 623 aa16.67■□□□□ 0.26
SYNC-201ENST00000373484 PFN1P07737 140 aaKnown RBP16.67■□□□□ 0.26
SYNC-201ENST00000373484 TMEM241Q24JQ0 296 aa16.67■□□□□ 0.26
SYNC-201ENST00000373484 TEX29Q8N6K0 151 aa16.67■□□□□ 0.26
SYNC-201ENST00000373484 MAP1LC3BQ9GZQ8 125 aa16.67■□□□□ 0.26
SYNC-201ENST00000373484 CACNG5Q9UF02 275 aa16.67■□□□□ 0.26
SYNC-201ENST00000373484 NAV3Q8IVL0 2385 aa16.66■□□□□ 0.26
SYNC-201ENST00000373484 SLC33A1O00400 549 aaPredicted RBP16.66■□□□□ 0.26
SYNC-201ENST00000373484 FABP4P15090 132 aa16.66■□□□□ 0.26
SYNC-201ENST00000373484 FGF7P21781 194 aa16.66■□□□□ 0.26
SYNC-201ENST00000373484 OR3A1P47881 315 aa16.66■□□□□ 0.26
SYNC-201ENST00000373484 TMEM267Q0VDI3 215 aaPredicted RBP16.66■□□□□ 0.26
SYNC-201ENST00000373484 PPP1R35Q8TAP8 253 aa16.66■□□□□ 0.26
SYNC-201ENST00000373484 BTF3L4Q96K17 158 aa16.66■□□□□ 0.26
SYNC-201ENST00000373484 NOL4LQ96MY1 436 aaPredicted RBP16.66■□□□□ 0.26
SYNC-201ENST00000373484 RSG1Q9BU20 258 aa16.66■□□□□ 0.26
SYNC-201ENST00000373484 RPL31P62899 125 aaKnown RBP16.66■□□□□ 0.26
SYNC-201ENST00000373484 GFI1BQ5VTD9 330 aa16.66■□□□□ 0.26
SYNC-201ENST00000373484 NCR3LG1Q68D85 454 aa16.66■□□□□ 0.26
SYNC-201ENST00000373484 LCN15Q6UWW0 184 aa16.66■□□□□ 0.26
SYNC-201ENST00000373484 TAF15Q92804 592 aaKnown RBP eCLIP16.66■□□□□ 0.26
SYNC-201ENST00000373484 MANBALQ9NQG1 85 aa16.66■□□□□ 0.26
SYNC-201ENST00000373484 TRAV24A0A0B4J272 114 aa16.65■□□□□ 0.26
SYNC-201ENST00000373484 CEBPZOSA8MTT3 80 aa16.65■□□□□ 0.26
SYNC-201ENST00000373484 MGST3O14880 152 aa16.65■□□□□ 0.26
SYNC-201ENST00000373484 FSHBP01225 129 aa16.65■□□□□ 0.26
SYNC-201ENST00000373484 ARF6P62330 175 aa16.65■□□□□ 0.26
SYNC-201ENST00000373484 MEF2BQ02080 365 aaPredicted RBP16.65■□□□□ 0.26
SYNC-201ENST00000373484 GAMTQ14353 236 aa16.65■□□□□ 0.26
SYNC-201ENST00000373484 Q6ZRM9 215 aa16.65■□□□□ 0.26
SYNC-201ENST00000373484 LILRB2Q8N423 598 aa16.65■□□□□ 0.26
SYNC-201ENST00000373484 KIR3DL3Q8N743 410 aa16.65■□□□□ 0.26
SYNC-201ENST00000373484 ZBTB34Q8NCN2 500 aa16.65■□□□□ 0.26
SYNC-201ENST00000373484 OR4X1Q8NH49 305 aa16.65■□□□□ 0.26
SYNC-201ENST00000373484 ANAPC16Q96DE5 110 aa16.65■□□□□ 0.26
SYNC-201ENST00000373484 SIRPDQ9H106 197 aa16.65■□□□□ 0.26
SYNC-201ENST00000373484 VENTXO95231 258 aa16.64■□□□□ 0.25
SYNC-201ENST00000373484 GCGP01275 180 aa16.64■□□□□ 0.25
SYNC-201ENST00000373484 IGKV1-39P01597 117 aa16.64■□□□□ 0.25
SYNC-201ENST00000373484 IGKV1D-39P04432 117 aa16.64■□□□□ 0.25
SYNC-201ENST00000373484 SRD5A1P18405 259 aa16.64■□□□□ 0.25
SYNC-201ENST00000373484 SRP14P37108 136 aaKnown RBP16.64■□□□□ 0.25
SYNC-201ENST00000373484 FAM3BP58499 235 aaPredicted RBP16.64■□□□□ 0.25
SYNC-201ENST00000373484 MSMO1Q15800 293 aa16.64■□□□□ 0.25
SYNC-201ENST00000373484 TMEM14EPQ6UXP3 125 aa16.64■□□□□ 0.25
SYNC-201ENST00000373484 HAPLN4Q86UW8 402 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms