RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 BCL2L2Q92843 193 aaPredicted RBP11.34□□□□□ -0.59
USP49-201ENST00000373006 RNASE7Q9H1E1 156 aaKnown RBP11.34□□□□□ -0.59
USP49-201ENST00000373006 FZR1Q9UM11 496 aa11.34□□□□□ -0.59
USP49-201ENST00000373006 CGAP01215 116 aa11.34□□□□□ -0.59
USP49-201ENST00000373006 RELBQ01201 579 aa11.34□□□□□ -0.59
USP49-201ENST00000373006 EFNB3Q15768 340 aa11.34□□□□□ -0.59
USP49-201ENST00000373006 FBLN7Q53RD9 439 aa11.34□□□□□ -0.59
USP49-201ENST00000373006 EAF1Q96JC9 268 aaPredicted RBP11.34□□□□□ -0.59
USP49-201ENST00000373006 LOC105371242A0A075B767 164 aa11.34□□□□□ -0.59
USP49-201ENST00000373006 ESDP10768 282 aa11.34□□□□□ -0.59
USP49-201ENST00000373006 MPV17P39210 176 aa11.34□□□□□ -0.59
USP49-201ENST00000373006 KLF3P57682 345 aaPredicted RBP11.34□□□□□ -0.59
USP49-201ENST00000373006 TMEM249Q2WGJ8 235 aa11.34□□□□□ -0.59
USP49-201ENST00000373006 Q8TCH9 128 aa11.34□□□□□ -0.59
USP49-201ENST00000373006 C1orf159Q96HA4 380 aa11.34□□□□□ -0.59
USP49-201ENST00000373006 ZNF586Q9NXT0 402 aa11.34□□□□□ -0.59
USP49-201ENST00000373006 SH3BGRL2Q9UJC5 107 aa11.34□□□□□ -0.59
USP49-201ENST00000373006 CHTOPQ9Y3Y2 248 aaKnown RBP11.34□□□□□ -0.59
USP49-201ENST00000373006 PCSK5Q92824 1860 aa11.34□□□□□ -0.59
USP49-201ENST00000373006 CRYABP02511 175 aaKnown RBP11.33□□□□□ -0.6
USP49-201ENST00000373006 PSG1P11464 419 aa11.33□□□□□ -0.6
USP49-201ENST00000373006 UBE2V1Q13404 147 aa11.33□□□□□ -0.6
USP49-201ENST00000373006 RPL39P5Q59GN2 51 aa11.33□□□□□ -0.6
USP49-201ENST00000373006 ABHD17BQ5VST6 288 aa11.33□□□□□ -0.6
USP49-201ENST00000373006 SLC35E4Q6ICL7 350 aa11.33□□□□□ -0.6
USP49-201ENST00000373006 UHRF2Q96PU4 802 aa11.33□□□□□ -0.6
USP49-201ENST00000373006 HSD17B10Q99714 261 aaKnown RBP11.33□□□□□ -0.6
USP49-201ENST00000373006 NRN1Q9NPD7 142 aa11.33□□□□□ -0.6
USP49-201ENST00000373006 CIDEAO60543 219 aa11.33□□□□□ -0.6
USP49-201ENST00000373006 GFRA3O60609 400 aa11.33□□□□□ -0.6
USP49-201ENST00000373006 CD46P15529 392 aa11.33□□□□□ -0.6
USP49-201ENST00000373006 GPR12P47775 334 aa11.33□□□□□ -0.6
USP49-201ENST00000373006 SMIM15Q7Z3B0 74 aa11.33□□□□□ -0.6
USP49-201ENST00000373006 V9GYV3 84 aa11.33□□□□□ -0.6
USP49-201ENST00000373006 HCFC1P51610 2035 aa11.32□□□□□ -0.6
USP49-201ENST00000373006 AHRRA9YTQ3 701 aa11.32□□□□□ -0.6
USP49-201ENST00000373006 HYPMO75409 117 aa11.32□□□□□ -0.6
USP49-201ENST00000373006 CRYBB3P26998 211 aa11.32□□□□□ -0.6
USP49-201ENST00000373006 DUTP33316 252 aaKnown RBP11.32□□□□□ -0.6
USP49-201ENST00000373006 Q56UQ5 140 aa11.32□□□□□ -0.6
USP49-201ENST00000373006 PQLC2Q6ZP29 291 aa11.32□□□□□ -0.6
USP49-201ENST00000373006 STPG3Q8N7X2 389 aa11.32□□□□□ -0.6
USP49-201ENST00000373006 Q8N976 141 aa11.32□□□□□ -0.6
USP49-201ENST00000373006 DEFB127Q9H1M4 99 aa11.32□□□□□ -0.6
USP49-201ENST00000373006 M0R1X1 148 aa11.32□□□□□ -0.6
USP49-201ENST00000373006 MPDU1O75352 247 aa11.32□□□□□ -0.6
USP49-201ENST00000373006 LYZL6O75951 148 aa11.32□□□□□ -0.6
USP49-201ENST00000373006 CDKN1BP46527 198 aa11.32□□□□□ -0.6
USP49-201ENST00000373006 Q0VG73 95 aa11.32□□□□□ -0.6
USP49-201ENST00000373006 C11orf53Q8IXP5 236 aa11.32□□□□□ -0.6
USP49-201ENST00000373006 GNG12Q9UBI6 72 aa11.32□□□□□ -0.6
USP49-201ENST00000373006 ITGB1BP1O14713 200 aa11.32□□□□□ -0.6
USP49-201ENST00000373006 ZNF253O75346 499 aa11.32□□□□□ -0.6
USP49-201ENST00000373006 OR4A47Q6IF82 309 aa11.32□□□□□ -0.6
USP49-201ENST00000373006 MRPL54Q6P161 138 aaKnown RBP11.32□□□□□ -0.6
USP49-201ENST00000373006 C6orf15Q6UXA7 325 aaPredicted RBP11.32□□□□□ -0.6
USP49-201ENST00000373006 NANOS1Q8WY41 292 aaKnown RBP11.32□□□□□ -0.6
USP49-201ENST00000373006 TXNDC17Q9BRA2 123 aa11.32□□□□□ -0.6
USP49-201ENST00000373006 HINT2Q9BX68 163 aa11.32□□□□□ -0.6
USP49-201ENST00000373006 DCHS1Q96JQ0 3298 aa11.31□□□□□ -0.6
USP49-201ENST00000373006 LAMTOR5O43504 91 aa11.31□□□□□ -0.6
USP49-201ENST00000373006 VDAC2P45880 294 aaPredicted RBP11.31□□□□□ -0.6
USP49-201ENST00000373006 TCTAP57738 103 aa11.31□□□□□ -0.6
USP49-201ENST00000373006 CENPWQ5EE01 88 aa11.31□□□□□ -0.6
USP49-201ENST00000373006 CLUHP3Q96NS8 147 aa11.31□□□□□ -0.6
USP49-201ENST00000373006 GUCD1Q96NT3 240 aa11.31□□□□□ -0.6
USP49-201ENST00000373006 NPVFQ9HCQ7 196 aa11.31□□□□□ -0.6
USP49-201ENST00000373006 A0A1W2PS18 150 aa11.31□□□□□ -0.6
USP49-201ENST00000373006 HELTA6NFD8 242 aa11.31□□□□□ -0.6
USP49-201ENST00000373006 PRSS46E5RG02 174 aa11.31□□□□□ -0.6
USP49-201ENST00000373006 HOXC12P31275 282 aa11.31□□□□□ -0.6
USP49-201ENST00000373006 GNG4P50150 75 aa11.31□□□□□ -0.6
USP49-201ENST00000373006 ZNF83P51522 516 aa11.31□□□□□ -0.6
USP49-201ENST00000373006 RPL19P84098 196 aaKnown RBP11.31□□□□□ -0.6
USP49-201ENST00000373006 MIR17HGQ75NE6 70 aa11.31□□□□□ -0.6
USP49-201ENST00000373006 KLF14Q8TD94 323 aaPredicted RBP11.31□□□□□ -0.6
USP49-201ENST00000373006 RNF2Q99496 336 aa11.31□□□□□ -0.6
USP49-201ENST00000373006 BET1LQ9NYM9 111 aa11.31□□□□□ -0.6
USP49-201ENST00000373006 UQCR10Q9UDW1 63 aa11.31□□□□□ -0.6
USP49-201ENST00000373006 KMT2EQ8IZD2 1858 aa11.31□□□□□ -0.6
USP49-201ENST00000373006 MYOD1P15172 320 aa11.3□□□□□ -0.6
USP49-201ENST00000373006 SRIP30626 198 aa11.3□□□□□ -0.6
USP49-201ENST00000373006 MRPL49Q13405 166 aaKnown RBP11.3□□□□□ -0.6
USP49-201ENST00000373006 PSG5Q15238 335 aa11.3□□□□□ -0.6
USP49-201ENST00000373006 ACP7Q6ZNF0 438 aa11.3□□□□□ -0.6
USP49-201ENST00000373006 MRPL52Q86TS9 123 aaKnown RBP11.3□□□□□ -0.6
USP49-201ENST00000373006 C1orf174Q8IYL3 243 aa11.3□□□□□ -0.6
USP49-201ENST00000373006 NUDT10Q8NFP7 164 aa11.3□□□□□ -0.6
USP49-201ENST00000373006 OR4B1Q8NGF8 309 aa11.3□□□□□ -0.6
USP49-201ENST00000373006 NUDT11Q96G61 164 aa11.3□□□□□ -0.6
USP49-201ENST00000373006 HES4Q9HCC6 221 aa11.3□□□□□ -0.6
USP49-201ENST00000373006 SERTAD4Q9NUC0 356 aa11.3□□□□□ -0.6
USP49-201ENST00000373006 CA1P00915 261 aaPredicted RBP11.3□□□□□ -0.6
USP49-201ENST00000373006 MGST1P10620 155 aaKnown RBP11.3□□□□□ -0.6
USP49-201ENST00000373006 RHOBP62745 196 aa11.3□□□□□ -0.6
USP49-201ENST00000373006 GCNT2Q8N0V5 402 aa11.3□□□□□ -0.6
USP49-201ENST00000373006 FAM216AQ8WUB2 273 aa11.3□□□□□ -0.6
USP49-201ENST00000373006 LEAP2Q969E1 77 aa11.3□□□□□ -0.6
USP49-201ENST00000373006 SFXN3Q9BWM7 321 aa11.3□□□□□ -0.6
USP49-201ENST00000373006 GCM1Q9NP62 436 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms