RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 PLAURQ03405 335 aa11.99□□□□□ -0.49
RAPGEF1-202ENST00000372190 C1orf174Q8IYL3 243 aa11.99□□□□□ -0.49
RAPGEF1-202ENST00000372190 DDB2Q92466 427 aa11.99□□□□□ -0.49
RAPGEF1-202ENST00000372190 HARBI1Q96MB7 349 aa11.99□□□□□ -0.49
RAPGEF1-202ENST00000372190 CTSBP07858 339 aa11.99□□□□□ -0.49
RAPGEF1-202ENST00000372190 SSBP3Q9BWW4 388 aaPredicted RBP11.99□□□□□ -0.49
RAPGEF1-202ENST00000372190 ST6GALNAC2Q9UJ37 374 aa11.99□□□□□ -0.49
RAPGEF1-202ENST00000372190 RNF115Q9Y4L5 304 aa11.99□□□□□ -0.49
RAPGEF1-202ENST00000372190 GAGE12JA6NER3 117 aa11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 CDIPTO14735 213 aa11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 GAGE7O76087 117 aa11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 GAGE12FP0CL80 117 aa11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 GAGE12GP0CL81 117 aa11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 GAGE12IP0CL82 117 aa11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 GAGE4Q13068 117 aa11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 CDK2AP2O75956 126 aa11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 GPX4P36969 197 aaPredicted RBP11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 RPS11P62280 158 aaKnown RBP eCLIP11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 DSPPQ9NZW4 1301 aa11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 IGHV3OR15-7A0A075B7D8 119 aa11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 RBM3P98179 157 aaKnown RBP11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 GAGE5Q13069 117 aa11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 GAGE6Q13070 117 aa11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 CEACAM21Q3KPI0 293 aa11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 VKORC1Q9BQB6 163 aa11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 GP6Q9HCN6 339 aa11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 FCN3O75636 299 aa11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 GZMHP20718 246 aa11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 KCNMB1Q16558 191 aa11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 MRPL55Q7Z7F7 128 aaKnown RBP11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 FOXD3Q9UJU5 478 aaPredicted RBP11.98□□□□□ -0.49
RAPGEF1-202ENST00000372190 UPK3AO75631 287 aa11.97□□□□□ -0.49
RAPGEF1-202ENST00000372190 LHX2P50458 406 aa11.97□□□□□ -0.49
RAPGEF1-202ENST00000372190 PPP1R3EQ9H7J1 279 aa11.97□□□□□ -0.49
RAPGEF1-202ENST00000372190 ARID1BQ8NFD5 2236 aaPredicted RBP11.97□□□□□ -0.49
RAPGEF1-202ENST00000372190 LINC00596Q86U02 117 aa11.97□□□□□ -0.49
RAPGEF1-202ENST00000372190 ANKRD29Q8N6D5 301 aa11.97□□□□□ -0.49
RAPGEF1-202ENST00000372190 MRPL32Q9BYC8 188 aaKnown RBP11.97□□□□□ -0.49
RAPGEF1-202ENST00000372190 KLK13Q9UKR3 277 aa11.97□□□□□ -0.49
RAPGEF1-202ENST00000372190 CYP2G1PQ6ZSU1 146 aa11.97□□□□□ -0.49
RAPGEF1-202ENST00000372190 SPACA3Q8IXA5 215 aa11.97□□□□□ -0.49
RAPGEF1-202ENST00000372190 LRTM2Q8N967 370 aa11.97□□□□□ -0.49
RAPGEF1-202ENST00000372190 DNAJC30Q96LL9 226 aa11.97□□□□□ -0.49
RAPGEF1-202ENST00000372190 IZUMO1RA6ND01 250 aa11.97□□□□□ -0.49
RAPGEF1-202ENST00000372190 SMAD7O15105 426 aaKnown RBP11.97□□□□□ -0.49
RAPGEF1-202ENST00000372190 EFNB2P52799 333 aa11.97□□□□□ -0.49
RAPGEF1-202ENST00000372190 CCL8P80075 99 aa11.97□□□□□ -0.49
RAPGEF1-202ENST00000372190 TBR1Q16650 682 aa11.97□□□□□ -0.49
RAPGEF1-202ENST00000372190 TMEM126AQ9H061 195 aa11.97□□□□□ -0.49
RAPGEF1-202ENST00000372190 IGHV3-13P01766 116 aa11.96□□□□□ -0.49
RAPGEF1-202ENST00000372190 IGHV3-7P01780 117 aa11.96□□□□□ -0.49
RAPGEF1-202ENST00000372190 CD59P13987 128 aa11.96□□□□□ -0.49
RAPGEF1-202ENST00000372190 LOXL3P58215 753 aa11.96□□□□□ -0.49
RAPGEF1-202ENST00000372190 MIC13Q5XKP0 118 aa11.96□□□□□ -0.49
RAPGEF1-202ENST00000372190 CFAP161Q6P656 301 aa11.96□□□□□ -0.49
RAPGEF1-202ENST00000372190 LEPP41159 167 aa11.96□□□□□ -0.49
RAPGEF1-202ENST00000372190 GAGE1Q13065 139 aa11.96□□□□□ -0.49
RAPGEF1-202ENST00000372190 HIST1H2BLQ99880 126 aa11.96□□□□□ -0.49
RAPGEF1-202ENST00000372190 A0A1W2PS18 150 aa11.96□□□□□ -0.49
RAPGEF1-202ENST00000372190 ODAMA1E959 279 aa11.96□□□□□ -0.49
RAPGEF1-202ENST00000372190 CA11O75493 328 aa11.96□□□□□ -0.49
RAPGEF1-202ENST00000372190 ORMDL3Q8N138 153 aa11.96□□□□□ -0.49
RAPGEF1-202ENST00000372190 GPR146Q96CH1 333 aa11.96□□□□□ -0.49
RAPGEF1-202ENST00000372190 IGHV1-69-2A0A0G2JMI3 117 aa11.96□□□□□ -0.5
RAPGEF1-202ENST00000372190 NCR2O95944 276 aa11.96□□□□□ -0.5
RAPGEF1-202ENST00000372190 IGKCP01834 107 aa11.96□□□□□ -0.5
RAPGEF1-202ENST00000372190 HBDP02042 147 aa11.96□□□□□ -0.5
RAPGEF1-202ENST00000372190 TDGF1P3P51864 188 aa11.96□□□□□ -0.5
RAPGEF1-202ENST00000372190 ZNF658BQ4V348 819 aaPredicted RBP11.96□□□□□ -0.5
RAPGEF1-202ENST00000372190 FAM74A4Q5TZK3 123 aa11.96□□□□□ -0.5
RAPGEF1-202ENST00000372190 TET1Q8NFU7 2136 aa11.96□□□□□ -0.5
RAPGEF1-202ENST00000372190 A0A1B0GUT8 65 aa11.96□□□□□ -0.5
RAPGEF1-202ENST00000372190 Q6AWC8 147 aa11.96□□□□□ -0.5
RAPGEF1-202ENST00000372190 CHST5Q9GZS9 411 aa11.96□□□□□ -0.5
RAPGEF1-202ENST00000372190 SH3BGRL3Q9H299 93 aa11.96□□□□□ -0.5
RAPGEF1-202ENST00000372190 SCN5AQ14524 2016 aa11.96□□□□□ -0.5
RAPGEF1-202ENST00000372190 RPL36A-HNRNPH2H7BZ11 118 aa11.95□□□□□ -0.5
RAPGEF1-202ENST00000372190 CRPP02741 224 aa11.95□□□□□ -0.5
RAPGEF1-202ENST00000372190 CD1AP06126 327 aa11.95□□□□□ -0.5
RAPGEF1-202ENST00000372190 SMIM20Q8N5G0 67 aa11.95□□□□□ -0.5
RAPGEF1-202ENST00000372190 PLPPR1Q8TBJ4 325 aa11.95□□□□□ -0.5
RAPGEF1-202ENST00000372190 TSSC4Q9Y5U2 329 aaPredicted RBP11.95□□□□□ -0.5
RAPGEF1-202ENST00000372190 WNT9BO14905 357 aa11.95□□□□□ -0.5
RAPGEF1-202ENST00000372190 VSIG8P0DPA2 414 aa11.95□□□□□ -0.5
RAPGEF1-202ENST00000372190 LY6DQ14210 128 aa11.95□□□□□ -0.5
RAPGEF1-202ENST00000372190 TMUB1Q9BVT8 246 aa11.95□□□□□ -0.5
RAPGEF1-202ENST00000372190 UCP2P55851 309 aa11.95□□□□□ -0.5
RAPGEF1-202ENST00000372190 LAMTOR1Q6IAA8 161 aa11.95□□□□□ -0.5
RAPGEF1-202ENST00000372190 LINC01560Q8TB33 94 aa11.95□□□□□ -0.5
RAPGEF1-202ENST00000372190 TOMM7Q9P0U1 55 aa11.95□□□□□ -0.5
RAPGEF1-202ENST00000372190 SLC25A10Q9UBX3 287 aaPredicted RBP11.95□□□□□ -0.5
RAPGEF1-202ENST00000372190 GPR132Q9UNW8 380 aa11.95□□□□□ -0.5
RAPGEF1-202ENST00000372190 ADMP35318 185 aa11.95□□□□□ -0.5
RAPGEF1-202ENST00000372190 NAA38Q9BRA0 125 aaKnown RBP11.95□□□□□ -0.5
RAPGEF1-202ENST00000372190 SIRT4Q9Y6E7 314 aaPredicted RBP11.95□□□□□ -0.5
RAPGEF1-202ENST00000372190 FAM90A26D6RGX4 464 aa11.95□□□□□ -0.5
RAPGEF1-202ENST00000372190 C5orf47Q569G3 176 aa11.95□□□□□ -0.5
RAPGEF1-202ENST00000372190 CD5LO43866 347 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 PDLIM4P50479 330 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 ZP1P60852 638 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms