RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 OR4A47Q6IF82 309 aa11.48□□□□□ -0.57
LDB3-204ENST00000372066 RBMS3Q6XE24 437 aaKnown RBP11.48□□□□□ -0.57
LDB3-204ENST00000372066 ZNF833PQ6ZTB9 187 aa11.48□□□□□ -0.57
LDB3-204ENST00000372066 SSX9Q7RTT3 188 aa11.48□□□□□ -0.57
LDB3-204ENST00000372066 LINC00311Q8N616 119 aa11.48□□□□□ -0.57
LDB3-204ENST00000372066 ZNF596Q8TC21 504 aa11.48□□□□□ -0.57
LDB3-204ENST00000372066 RXFP4Q8TDU9 374 aa11.48□□□□□ -0.57
LDB3-204ENST00000372066 LEAP2Q969E1 77 aa11.48□□□□□ -0.57
LDB3-204ENST00000372066 ACTR3CQ9C0K3 210 aaPredicted RBP11.48□□□□□ -0.57
LDB3-204ENST00000372066 SLC35D1Q9NTN3 355 aa11.48□□□□□ -0.57
LDB3-204ENST00000372066 DCAF16Q9NXF7 216 aa11.48□□□□□ -0.57
LDB3-204ENST00000372066 VAX2Q9UIW0 290 aa11.48□□□□□ -0.57
LDB3-204ENST00000372066 FBN1P35555 2871 aaKnown RBP11.48□□□□□ -0.57
LDB3-204ENST00000372066 ATRQ13535 2644 aa11.48□□□□□ -0.57
LDB3-204ENST00000372066 A0A087WWC5 75 aa11.47□□□□□ -0.57
LDB3-204ENST00000372066 FNDC10F2Z333 226 aa11.47□□□□□ -0.57
LDB3-204ENST00000372066 IFNA10P01566 189 aa11.47□□□□□ -0.57
LDB3-204ENST00000372066 APOA2P02652 100 aa11.47□□□□□ -0.57
LDB3-204ENST00000372066 SNRNP70P08621 437 aaKnown RBP11.47□□□□□ -0.57
LDB3-204ENST00000372066 HOXA1P49639 335 aaPredicted RBP11.47□□□□□ -0.57
LDB3-204ENST00000372066 GNG10P50151 68 aa11.47□□□□□ -0.57
LDB3-204ENST00000372066 ELLP55199 621 aaPredicted RBP11.47□□□□□ -0.57
LDB3-204ENST00000372066 HSPE1P61604 102 aaKnown RBP11.47□□□□□ -0.57
LDB3-204ENST00000372066 RNF212Q495C1 297 aa11.47□□□□□ -0.57
LDB3-204ENST00000372066 SLC35E3Q7Z769 313 aa11.47□□□□□ -0.57
LDB3-204ENST00000372066 OSR1Q8TAX0 266 aaPredicted RBP11.47□□□□□ -0.57
LDB3-204ENST00000372066 NIPSNAP3BQ9BS92 247 aa11.47□□□□□ -0.57
LDB3-204ENST00000372066 VSIRQ9H7M9 311 aa11.47□□□□□ -0.57
LDB3-204ENST00000372066 ENY2Q9NPA8 101 aa11.47□□□□□ -0.57
LDB3-204ENST00000372066 FKBP11Q9NYL4 201 aa11.47□□□□□ -0.57
LDB3-204ENST00000372066 GNG13Q9P2W3 67 aa11.47□□□□□ -0.57
LDB3-204ENST00000372066 MLXQ9UH92 298 aa11.47□□□□□ -0.57
LDB3-204ENST00000372066 SONP18583 2426 aaKnown RBP11.47□□□□□ -0.57
LDB3-204ENST00000372066 TRBV23-1A0A0A0MS06 115 aa11.46□□□□□ -0.57
LDB3-204ENST00000372066 IGHV1-69-2A0A0G2JMI3 117 aa11.46□□□□□ -0.57
LDB3-204ENST00000372066 B4DEV8 164 aa11.46□□□□□ -0.57
LDB3-204ENST00000372066 CD5LO43866 347 aa11.46□□□□□ -0.57
LDB3-204ENST00000372066 IGHV3-7P01780 117 aa11.46□□□□□ -0.57
LDB3-204ENST00000372066 IL6RP08887 468 aaPredicted RBP11.46□□□□□ -0.57
LDB3-204ENST00000372066 CD1BP29016 333 aa11.46□□□□□ -0.57
LDB3-204ENST00000372066 PNRC1Q12796 327 aaPredicted RBP11.46□□□□□ -0.57
LDB3-204ENST00000372066 TMEM249Q2WGJ8 235 aa11.46□□□□□ -0.57
LDB3-204ENST00000372066 FFAR4Q5NUL3 377 aa11.46□□□□□ -0.57
LDB3-204ENST00000372066 ACSM6Q6P461 480 aa11.46□□□□□ -0.57
LDB3-204ENST00000372066 LCN15Q6UWW0 184 aa11.46□□□□□ -0.57
LDB3-204ENST00000372066 ETV3LQ6ZN32 361 aa11.46□□□□□ -0.57
LDB3-204ENST00000372066 C1orf229Q6ZS94 237 aaPredicted RBP11.46□□□□□ -0.57
LDB3-204ENST00000372066 OR10G9Q8NGN4 311 aa11.46□□□□□ -0.57
LDB3-204ENST00000372066 OR10G7Q8NGN6 311 aa11.46□□□□□ -0.57
LDB3-204ENST00000372066 CCL17Q92583 94 aa11.46□□□□□ -0.57
LDB3-204ENST00000372066 LHX4Q969G2 390 aa11.46□□□□□ -0.57
LDB3-204ENST00000372066 MANBALQ9NQG1 85 aa11.46□□□□□ -0.57
LDB3-204ENST00000372066 BET1LQ9NYM9 111 aa11.46□□□□□ -0.57
LDB3-204ENST00000372066 ARFGEF3Q5TH69 2177 aa11.46□□□□□ -0.58
LDB3-204ENST00000372066 A0A087X0M5 115 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 A0A1B0GX30 115 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 A0A1W2PPE3 182 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 COLCA2A8K830 154 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 H3BQ15 152 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 CYB5BO43169 146 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 MMP23AO75900 390 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 MT-ND4LP03901 98 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 TMEM200BQ69YZ2 307 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 RPP25LQ8N5L8 163 aaKnown RBP11.45□□□□□ -0.58
LDB3-204ENST00000372066 CYB561D1Q8N8Q1 229 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 OR13D1Q8NGV5 346 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 TMEM186Q96B77 213 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 TVP23CQ96ET8 276 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 SEC14L6B5MCN3 397 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 PRSS46E5RG02 174 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 UPK2O00526 184 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 CT45A6P0DMU7 189 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 CT45A5P0DMU8 189 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 CT45A7P0DMV0 189 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 NPY1RP25929 384 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 OPRK1P41145 380 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 SPINK9Q5DT21 86 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 VKORC1L1Q8N0U8 176 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 SLC24A4Q8NFF2 622 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 RAB1CQ92928 201 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 NEIL1Q96FI4 390 aaPredicted RBP11.45□□□□□ -0.58
LDB3-204ENST00000372066 SIRT7Q9NRC8 400 aa11.45□□□□□ -0.58
LDB3-204ENST00000372066 PUS1Q9Y606 427 aaKnown RBP eCLIP11.45□□□□□ -0.58
LDB3-204ENST00000372066 ZFP92A6NM28 416 aa11.44□□□□□ -0.58
LDB3-204ENST00000372066 IL3RAP26951 378 aa11.44□□□□□ -0.58
LDB3-204ENST00000372066 MAS1LP35410 378 aa11.44□□□□□ -0.58
LDB3-204ENST00000372066 PPOXP50336 477 aa11.44□□□□□ -0.58
LDB3-204ENST00000372066 ZNF137PP52743 207 aa11.44□□□□□ -0.58
LDB3-204ENST00000372066 PRCDQ00LT1 54 aa11.44□□□□□ -0.58
LDB3-204ENST00000372066 TMEM155Q4W5P6 130 aa11.44□□□□□ -0.58
LDB3-204ENST00000372066 AKIRIN2Q53H80 203 aa11.44□□□□□ -0.58
LDB3-204ENST00000372066 UTF1Q5T230 341 aa11.44□□□□□ -0.58
LDB3-204ENST00000372066 SSX7Q7RTT5 188 aa11.44□□□□□ -0.58
LDB3-204ENST00000372066 DTX2Q86UW9 622 aa11.44□□□□□ -0.58
LDB3-204ENST00000372066 ZCCHC24Q8N2G6 241 aaKnown RBP11.44□□□□□ -0.58
LDB3-204ENST00000372066 OR5B3Q8NH48 314 aa11.44□□□□□ -0.58
LDB3-204ENST00000372066 OR4A5Q8NH83 315 aa11.44□□□□□ -0.58
LDB3-204ENST00000372066 H1FXQ92522 213 aaKnown RBP11.44□□□□□ -0.58
LDB3-204ENST00000372066 TRAV3A0A0B4J244 114 aa11.43□□□□□ -0.58
LDB3-204ENST00000372066 CXorf65A6NEN9 183 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms