RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 SLC35E4Q6ICL7 350 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 VHLLQ6RSH7 139 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 H2BFWTQ7Z2G1 175 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 TMEM256Q8N2U0 113 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 OR52E5Q8NH55 327 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 OR1L1Q8NH94 360 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 GALMQ96C23 342 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 ZNF488Q96MN9 340 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 TMEM208Q9BTX3 173 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 A0A1W2PPR1 153 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 OOEPA6NGQ2 149 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 SHISA9B4DS77 424 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 HMGB3O15347 200 aaKnown RBP9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 NDUFB4O95168 129 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 NGFP01138 241 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 REG1AP05451 166 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 STAG3L2P0CL84 134 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 STAG3L3P0CL85 134 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 ADMP35318 185 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 G6PCP35575 357 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 PDLIM3Q53GG5 364 aaPredicted RBP9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 ZNF705AQ6ZN79 300 aaPredicted RBP9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 OR4B1Q8NGF8 309 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 SVIPQ8NHG7 77 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 C11orf52Q96A22 123 aa9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 HSD17B10Q99714 261 aaKnown RBP9.45□□□□□ -0.9
TSPAN1-201ENST00000372003 SAA2-SAA4A0A096LPE2 208 aa9.44□□□□□ -0.9
TSPAN1-201ENST00000372003 C15orf62A8K5M9 175 aa9.44□□□□□ -0.9
TSPAN1-201ENST00000372003 CDIPTO14735 213 aa9.44□□□□□ -0.9
TSPAN1-201ENST00000372003 RHBDL1O75783 438 aa9.44□□□□□ -0.9
TSPAN1-201ENST00000372003 MT-CO2P00403 227 aa9.44□□□□□ -0.9
TSPAN1-201ENST00000372003 MT-ND6P03923 174 aa9.44□□□□□ -0.9
TSPAN1-201ENST00000372003 CRISP2P16562 243 aa9.44□□□□□ -0.9
TSPAN1-201ENST00000372003 G0S2P27469 103 aa9.44□□□□□ -0.9
TSPAN1-201ENST00000372003 RPL29P47914 159 aaKnown RBP9.44□□□□□ -0.9
TSPAN1-201ENST00000372003 ATP5G3P48201 142 aa9.44□□□□□ -0.9
TSPAN1-201ENST00000372003 KRTAP10-9P60411 292 aa9.44□□□□□ -0.9
TSPAN1-201ENST00000372003 CST9LP1Q5W188 147 aa9.44□□□□□ -0.9
TSPAN1-201ENST00000372003 TOMM20LQ6UXN7 152 aa9.44□□□□□ -0.9
TSPAN1-201ENST00000372003 OR5AU1Q8NGC0 362 aa9.44□□□□□ -0.9
TSPAN1-201ENST00000372003 QTRT1Q9BXR0 403 aaKnown RBP9.44□□□□□ -0.9
TSPAN1-201ENST00000372003 UBTD1Q9HAC8 227 aa9.44□□□□□ -0.9
TSPAN1-201ENST00000372003 E7EQL1 145 aa9.43□□□□□ -0.9
TSPAN1-201ENST00000372003 SIRPB1O00241 398 aa9.43□□□□□ -0.9
TSPAN1-201ENST00000372003 NUPR1O60356 82 aa9.43□□□□□ -0.9
TSPAN1-201ENST00000372003 S1PR2O95136 353 aa9.43□□□□□ -0.9
TSPAN1-201ENST00000372003 NXPH2O95156 264 aa9.43□□□□□ -0.9
TSPAN1-201ENST00000372003 GOSR1O95249 250 aa9.43□□□□□ -0.9
TSPAN1-201ENST00000372003 AREGP15514 252 aa9.43□□□□□ -0.9
TSPAN1-201ENST00000372003 BRS3P32247 399 aa9.43□□□□□ -0.9
TSPAN1-201ENST00000372003 PRSS8Q16651 343 aa9.43□□□□□ -0.9
TSPAN1-201ENST00000372003 TRAT1Q6PIZ9 186 aa9.43□□□□□ -0.9
TSPAN1-201ENST00000372003 Q6ZWC4 215 aa9.43□□□□□ -0.9
TSPAN1-201ENST00000372003 SCCPDHQ8NBX0 429 aa9.43□□□□□ -0.9
TSPAN1-201ENST00000372003 NINJ1Q92982 152 aa9.43□□□□□ -0.9
TSPAN1-201ENST00000372003 VAMP8Q9BV40 100 aa9.43□□□□□ -0.9
TSPAN1-201ENST00000372003 GNB1LQ9BYB4 327 aa9.43□□□□□ -0.9
TSPAN1-201ENST00000372003 OR2D2Q9H210 308 aa9.43□□□□□ -0.9
TSPAN1-201ENST00000372003 HES4Q9HCC6 221 aa9.43□□□□□ -0.9
TSPAN1-201ENST00000372003 PRR14LQ5THK1 2151 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 TRGV10A0A0A0MS01 117 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 RBFOX2O43251 390 aaKnown RBP eCLIP9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 RAMP3O60896 148 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 OR10J4P0C629 311 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 SELEP16581 610 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 CA6P23280 308 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 WNT5AP41221 380 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 RPL30P62888 115 aaKnown RBP9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 ZNF90Q03938 601 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 ZNF672Q499Z4 452 aaPredicted RBP9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 OR10J3Q5JRS4 329 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 COL5A1-AS1Q5SY13 56 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 WDR73Q6P4I2 378 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 PRR18Q8N4B5 295 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 NRGNQ92686 78 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 SDSLQ96GA7 329 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 TP53TG3Q9ULZ0 132 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 ANKHD1Q8IWZ3 2542 aaKnown RBP9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 YLPM1P49750 1951 aaKnown RBP9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 HAND1O96004 215 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 IL6RP08887 468 aaPredicted RBP9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 IRF2P14316 349 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 FABP6P51161 128 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 LGALS4P56470 323 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 ZNF816Q0VGE8 651 aaPredicted RBP9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 ZNF718Q3SXZ3 478 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 SPATA46Q5T0L3 261 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 OR5T1Q8NG75 326 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 UHRF2Q96PU4 802 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 RNF2Q99496 336 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 OR2J1Q9GZK6 312 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 MRPL18Q9H0U6 180 aaKnown RBP9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 FZR1Q9UM11 496 aa9.42□□□□□ -0.9
TSPAN1-201ENST00000372003 HECTD1Q9ULT8 2610 aa9.41□□□□□ -0.9
TSPAN1-201ENST00000372003 C17orf98A8MV24 154 aa9.41□□□□□ -0.9
TSPAN1-201ENST00000372003 C12orf77C9JDV5 145 aa9.41□□□□□ -0.9
TSPAN1-201ENST00000372003 FNDC10F2Z333 226 aa9.41□□□□□ -0.9
TSPAN1-201ENST00000372003 SMPD2O60906 423 aa9.41□□□□□ -0.9
TSPAN1-201ENST00000372003 BRWD1-AS2P59051 145 aa9.41□□□□□ -0.9
TSPAN1-201ENST00000372003 ZNF114Q8NC26 417 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms