RNA–Protein interactions for RNA: ENST00000370056.8

VAV3-202, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAV3, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-202ENST00000370056 ICAM4Q14773 271 aa18.13■□□□□ 0.49
VAV3-202ENST00000370056 SCGB1D4Q6XE38 83 aa18.13■□□□□ 0.49
VAV3-202ENST00000370056 CACNG8Q8WXS5 425 aa18.13■□□□□ 0.49
VAV3-202ENST00000370056 SCN8AQ9UQD0 1980 aa18.13■□□□□ 0.49
VAV3-202ENST00000370056 ESPL1Q14674 2120 aa18.13■□□□□ 0.49
VAV3-202ENST00000370056 RPS20P60866 119 aaKnown RBP18.13■□□□□ 0.49
VAV3-202ENST00000370056 SRSF12Q8WXF0 261 aaKnown RBP18.13■□□□□ 0.49
VAV3-202ENST00000370056 C16orf92Q96LL3 132 aa18.13■□□□□ 0.49
VAV3-202ENST00000370056 GRIFINA4D1Z8 144 aa18.12■□□□□ 0.49
VAV3-202ENST00000370056 CKS2P33552 79 aa18.12■□□□□ 0.49
VAV3-202ENST00000370056 FOXG1P55316 489 aaPredicted RBP18.12■□□□□ 0.49
VAV3-202ENST00000370056 SPRR3Q9UBC9 169 aa18.12■□□□□ 0.49
VAV3-202ENST00000370056 A0A1W2PS18 150 aa18.12■□□□□ 0.49
VAV3-202ENST00000370056 H3BTX0 84 aa18.12■□□□□ 0.49
VAV3-202ENST00000370056 FAM209BQ5JX69 171 aa18.12■□□□□ 0.49
VAV3-202ENST00000370056 MDC1Q14676 2089 aaKnown RBP18.12■□□□□ 0.49
VAV3-202ENST00000370056 TP53BP1Q12888 1972 aaPredicted RBP18.12■□□□□ 0.49
VAV3-202ENST00000370056 QRFPP83859 136 aa18.12■□□□□ 0.49
VAV3-202ENST00000370056 BSPH1Q075Z2 132 aa18.12■□□□□ 0.49
VAV3-202ENST00000370056 SPATA45Q537H7 98 aa18.12■□□□□ 0.49
VAV3-202ENST00000370056 C17orf100A8MU93 164 aa18.12■□□□□ 0.49
VAV3-202ENST00000370056 CBLN1P23435 193 aa18.12■□□□□ 0.49
VAV3-202ENST00000370056 SGK494Q96LW2 274 aa18.12■□□□□ 0.49
VAV3-202ENST00000370056 LINC01560Q8TB33 94 aa18.11■□□□□ 0.49
VAV3-202ENST00000370056 RBFOX2O43251 390 aaKnown RBP eCLIP18.11■□□□□ 0.492e-7■■■■□ 25.8
VAV3-202ENST00000370056 RPL13AP40429 203 aaKnown RBP18.11■□□□□ 0.49
VAV3-202ENST00000370056 RAB9AP51151 201 aa18.11■□□□□ 0.49
VAV3-202ENST00000370056 WFDC3Q8IUB2 231 aa18.11■□□□□ 0.49
VAV3-202ENST00000370056 WFDC1Q9HC57 220 aa18.11■□□□□ 0.49
VAV3-202ENST00000370056 ATP5G3P48201 142 aa18.11■□□□□ 0.49
VAV3-202ENST00000370056 OR10J6PQ8NGY7 276 aa18.11■□□□□ 0.49
VAV3-202ENST00000370056 PLAURQ03405 335 aa18.11■□□□□ 0.49
VAV3-202ENST00000370056 GOLT1AQ6ZVE7 132 aa18.11■□□□□ 0.49
VAV3-202ENST00000370056 SSBP3Q9BWW4 388 aaPredicted RBP18.1■□□□□ 0.49
VAV3-202ENST00000370056 CYTL1Q9NRR1 136 aa18.1■□□□□ 0.49
VAV3-202ENST00000370056 IL36BQ9NZH7 164 aa18.1■□□□□ 0.49
VAV3-202ENST00000370056 CLDN16Q9Y5I7 305 aa18.1■□□□□ 0.49
VAV3-202ENST00000370056 PF4V1P10720 104 aa18.1■□□□□ 0.49
VAV3-202ENST00000370056 MORN2Q502X0 79 aa18.1■□□□□ 0.49
VAV3-202ENST00000370056 EAF1Q96JC9 268 aaPredicted RBP18.1■□□□□ 0.49
VAV3-202ENST00000370056 MRPL20Q9BYC9 149 aaKnown RBP18.1■□□□□ 0.49
VAV3-202ENST00000370056 SNRNP200O75643 2136 aaKnown RBP18.1■□□□□ 0.49
VAV3-202ENST00000370056 UQCR10Q9UDW1 63 aa18.1■□□□□ 0.49
VAV3-202ENST00000370056 IL4P05112 153 aa18.1■□□□□ 0.49
VAV3-202ENST00000370056 NBEAP1P0C6P0 100 aa18.1■□□□□ 0.49
VAV3-202ENST00000370056 CD59P13987 128 aa18.1■□□□□ 0.49
VAV3-202ENST00000370056 RSPO3Q9BXY4 272 aaPredicted RBP18.1■□□□□ 0.49
VAV3-202ENST00000370056 SCO2A0A1W2PP80 73 aa18.09■□□□□ 0.49
VAV3-202ENST00000370056 ABHD17AQ96GS6 310 aa18.09■□□□□ 0.49
VAV3-202ENST00000370056 DPM3Q9P2X0 92 aa18.09■□□□□ 0.49
VAV3-202ENST00000370056 C5orf63A6NC05 138 aa18.09■□□□□ 0.49
VAV3-202ENST00000370056 RAMP3O60896 148 aa18.09■□□□□ 0.49
VAV3-202ENST00000370056 KLRB1Q12918 225 aa18.09■□□□□ 0.49
VAV3-202ENST00000370056 TMEM42Q69YG0 159 aa18.09■□□□□ 0.49
VAV3-202ENST00000370056 TMEM144Q7Z5S9 345 aa18.09■□□□□ 0.49
VAV3-202ENST00000370056 RNASEH2CQ8TDP1 164 aaKnown RBP18.09■□□□□ 0.49
VAV3-202ENST00000370056 SAA2-SAA4A0A096LPE2 208 aa18.09■□□□□ 0.49
VAV3-202ENST00000370056 SAA2P0DJI9 122 aaPredicted RBP18.09■□□□□ 0.49
VAV3-202ENST00000370056 OTX1P32242 354 aaPredicted RBP18.09■□□□□ 0.49
VAV3-202ENST00000370056 ELOVL1Q9BW60 279 aa18.09■□□□□ 0.49
VAV3-202ENST00000370056 ZNF738Q8NE65 137 aa18.08■□□□□ 0.48
VAV3-202ENST00000370056 RPL23P62829 140 aaKnown RBP18.08■□□□□ 0.48
VAV3-202ENST00000370056 WFIKKN1Q96NZ8 548 aa18.08■□□□□ 0.48
VAV3-202ENST00000370056 NAPSAO96009 420 aa18.08■□□□□ 0.48
VAV3-202ENST00000370056 FOLR2P14207 255 aa18.08■□□□□ 0.48
VAV3-202ENST00000370056 C15orf61A6NNL5 157 aa18.07■□□□□ 0.48
VAV3-202ENST00000370056 CD5P06127 495 aa18.07■□□□□ 0.48
VAV3-202ENST00000370056 CFPP27918 469 aa18.07■□□□□ 0.48
VAV3-202ENST00000370056 FBXL15Q9H469 300 aa18.07■□□□□ 0.48
VAV3-202ENST00000370056 RIF1Q5UIP0 2472 aaKnown RBP18.07■□□□□ 0.48
VAV3-202ENST00000370056 UPK2O00526 184 aa18.07■□□□□ 0.48
VAV3-202ENST00000370056 HTN1P15515 57 aa18.07■□□□□ 0.48
VAV3-202ENST00000370056 THADAQ6YHU6 1953 aa18.07■□□□□ 0.48
VAV3-202ENST00000370056 RNF144BQ7Z419 303 aa18.07■□□□□ 0.48
VAV3-202ENST00000370056 COL25A1Q9BXS0 654 aaPredicted RBP18.07■□□□□ 0.48
VAV3-202ENST00000370056 HBBP68871 147 aa18.07■□□□□ 0.48
VAV3-202ENST00000370056 COL4A6Q14031 1691 aa18.06■□□□□ 0.48
VAV3-202ENST00000370056 IGHV1-18A0A0C4DH31 117 aa18.06■□□□□ 0.48
VAV3-202ENST00000370056 SRSF4Q08170 494 aaKnown RBP18.06■□□□□ 0.48
VAV3-202ENST00000370056 SLC17A3O00476 420 aa18.06■□□□□ 0.48
VAV3-202ENST00000370056 HOXA5P20719 270 aa18.06■□□□□ 0.48
VAV3-202ENST00000370056 DUTP33316 252 aaKnown RBP18.06■□□□□ 0.48
VAV3-202ENST00000370056 Q0VFX4 171 aa18.06■□□□□ 0.48
VAV3-202ENST00000370056 BMPERQ8N8U9 685 aa18.06■□□□□ 0.48
VAV3-202ENST00000370056 TRAV9-1A0A075B6T8 112 aa18.06■□□□□ 0.48
VAV3-202ENST00000370056 MIR17HGQ75NE6 70 aa18.06■□□□□ 0.48
VAV3-202ENST00000370056 CD55P08174 381 aa18.06■□□□□ 0.48
VAV3-202ENST00000370056 SAA1P0DJI8 122 aaPredicted RBP18.06■□□□□ 0.48
VAV3-202ENST00000370056 NMUP48645 174 aa18.06■□□□□ 0.48
VAV3-202ENST00000370056 FOXL2NBQ6ZUU3 175 aa18.06■□□□□ 0.48
VAV3-202ENST00000370056 PEX7O00628 323 aa18.05■□□□□ 0.48
VAV3-202ENST00000370056 SNCGO76070 127 aa18.05■□□□□ 0.48
VAV3-202ENST00000370056 MBD3L1Q8WWY6 194 aa18.05■□□□□ 0.48
VAV3-202ENST00000370056 CCL20P78556 96 aa18.05■□□□□ 0.48
VAV3-202ENST00000370056 RTN4RL2Q86UN3 420 aa18.05■□□□□ 0.48
VAV3-202ENST00000370056 FAM90A9PA6NNJ1 464 aa18.05■□□□□ 0.48
VAV3-202ENST00000370056 ANOS1P23352 680 aa18.05■□□□□ 0.48
VAV3-202ENST00000370056 SRSF9Q13242 221 aaKnown RBP eCLIP18.05■□□□□ 0.48
VAV3-202ENST00000370056 TM4SF20Q53R12 229 aa18.05■□□□□ 0.48
VAV3-202ENST00000370056 NEU1Q99519 415 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms