RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 COA4Q9NYJ1 87 aa12.18□□□□□ -0.46
PRPF38B-202ENST00000370022 A0A0G2JRQ6 117 aa12.17□□□□□ -0.46
PRPF38B-202ENST00000370022 E7EUB6 86 aa12.17□□□□□ -0.46
PRPF38B-202ENST00000370022 PRAF2O60831 178 aa12.17□□□□□ -0.46
PRPF38B-202ENST00000370022 BRI3O95415 125 aa12.17□□□□□ -0.46
PRPF38B-202ENST00000370022 OPN1MWP04001 364 aa12.17□□□□□ -0.46
PRPF38B-202ENST00000370022 IL5P05113 134 aa12.17□□□□□ -0.46
PRPF38B-202ENST00000370022 OPN1MW2P0DN77 364 aa12.17□□□□□ -0.46
PRPF38B-202ENST00000370022 OPN1MW3P0DN78 364 aa12.17□□□□□ -0.46
PRPF38B-202ENST00000370022 PSMB8P28062 276 aa12.17□□□□□ -0.46
PRPF38B-202ENST00000370022 HSPE1P61604 102 aaKnown RBP12.17□□□□□ -0.46
PRPF38B-202ENST00000370022 AARDQ4LEZ3 155 aa12.17□□□□□ -0.46
PRPF38B-202ENST00000370022 CXorf66Q5JRM2 361 aaPredicted RBP12.17□□□□□ -0.46
PRPF38B-202ENST00000370022 ASPHD1Q5U4P2 390 aa12.17□□□□□ -0.46
PRPF38B-202ENST00000370022 MRPL41Q8IXM3 137 aaKnown RBP12.17□□□□□ -0.46
PRPF38B-202ENST00000370022 TTC9CQ8N5M4 171 aa12.17□□□□□ -0.46
PRPF38B-202ENST00000370022 FAM110DQ8TAY7 271 aaPredicted RBP12.17□□□□□ -0.46
PRPF38B-202ENST00000370022 ZNF431Q8TF32 576 aaPredicted RBP12.17□□□□□ -0.46
PRPF38B-202ENST00000370022 GPR146Q96CH1 333 aa12.17□□□□□ -0.46
PRPF38B-202ENST00000370022 A0A1B0GU03 582 aa12.16□□□□□ -0.46
PRPF38B-202ENST00000370022 CGB1A6NKQ9 187 aa12.16□□□□□ -0.46
PRPF38B-202ENST00000370022 DBX1A6NMT0 343 aa12.16□□□□□ -0.46
PRPF38B-202ENST00000370022 INMT-MINDY4F8WBC2 141 aa12.16□□□□□ -0.46
PRPF38B-202ENST00000370022 SULT1A3P0DMM9 295 aa12.16□□□□□ -0.46
PRPF38B-202ENST00000370022 SULT1A4P0DMN0 295 aa12.16□□□□□ -0.46
PRPF38B-202ENST00000370022 CD28P10747 220 aa12.16□□□□□ -0.46
PRPF38B-202ENST00000370022 SLC25A6P12236 298 aa12.16□□□□□ -0.46
PRPF38B-202ENST00000370022 MYOD1P15172 320 aa12.16□□□□□ -0.46
PRPF38B-202ENST00000370022 CD83Q01151 205 aa12.16□□□□□ -0.46
PRPF38B-202ENST00000370022 IZUMO4Q1ZYL8 232 aa12.16□□□□□ -0.46
PRPF38B-202ENST00000370022 TMEM65Q6PI78 240 aa12.16□□□□□ -0.46
PRPF38B-202ENST00000370022 C10orf99Q6UWK7 81 aa12.16□□□□□ -0.46
PRPF38B-202ENST00000370022 OR52E5Q8NH55 327 aa12.16□□□□□ -0.46
PRPF38B-202ENST00000370022 SLA2Q9H6Q3 261 aa12.16□□□□□ -0.46
PRPF38B-202ENST00000370022 GPN1Q9HCN4 374 aaPredicted RBP12.16□□□□□ -0.46
PRPF38B-202ENST00000370022 ZFP57Q9NU63 452 aa12.16□□□□□ -0.46
PRPF38B-202ENST00000370022 CACNG5Q9UF02 275 aa12.16□□□□□ -0.46
PRPF38B-202ENST00000370022 A0A1B0GW64 132 aa12.15□□□□□ -0.46
PRPF38B-202ENST00000370022 NPIPB5A8MRT5 1133 aa12.15□□□□□ -0.46
PRPF38B-202ENST00000370022 DHFRP00374 187 aa12.15□□□□□ -0.46
PRPF38B-202ENST00000370022 PRCDQ00LT1 54 aa12.15□□□□□ -0.46
PRPF38B-202ENST00000370022 SMCO1Q147U7 214 aa12.15□□□□□ -0.46
PRPF38B-202ENST00000370022 RGS21Q2M5E4 152 aa12.15□□□□□ -0.46
PRPF38B-202ENST00000370022 SMUG1Q53HV7 270 aa12.15□□□□□ -0.46
PRPF38B-202ENST00000370022 TCTEX1D4Q5JR98 221 aa12.15□□□□□ -0.46
PRPF38B-202ENST00000370022 Q6ZRM9 215 aa12.15□□□□□ -0.46
PRPF38B-202ENST00000370022 TSSC4Q9Y5U2 329 aaPredicted RBP12.15□□□□□ -0.46
PRPF38B-202ENST00000370022 hCG_2014768A0A024R1R8 64 aa12.14□□□□□ -0.47
PRPF38B-202ENST00000370022 TCRBV4S1A1TA0A5B7 111 aa12.14□□□□□ -0.47
PRPF38B-202ENST00000370022 IGLC7A0M8Q6 106 aa12.14□□□□□ -0.47
PRPF38B-202ENST00000370022 HMX3A6NHT5 357 aa12.14□□□□□ -0.47
PRPF38B-202ENST00000370022 ST8SIA3O43173 380 aa12.14□□□□□ -0.47
PRPF38B-202ENST00000370022 SOX15O60248 233 aa12.14□□□□□ -0.47
PRPF38B-202ENST00000370022 IFNA21P01568 189 aa12.14□□□□□ -0.47
PRPF38B-202ENST00000370022 IFNA17P01571 189 aa12.14□□□□□ -0.47
PRPF38B-202ENST00000370022 CRYGCP07315 174 aa12.14□□□□□ -0.47
PRPF38B-202ENST00000370022 PF4V1P10720 104 aa12.14□□□□□ -0.47
PRPF38B-202ENST00000370022 PSMB6P28072 239 aa12.14□□□□□ -0.47
PRPF38B-202ENST00000370022 SRSF4Q08170 494 aaKnown RBP12.14□□□□□ -0.47
PRPF38B-202ENST00000370022 PDLIM3Q53GG5 364 aaPredicted RBP12.14□□□□□ -0.47
PRPF38B-202ENST00000370022 C11orf44Q8N8P7 122 aa12.14□□□□□ -0.47
PRPF38B-202ENST00000370022 OR5T1Q8NG75 326 aa12.14□□□□□ -0.47
PRPF38B-202ENST00000370022 OR52B4Q8NGK2 314 aa12.14□□□□□ -0.47
PRPF38B-202ENST00000370022 CITED2Q99967 270 aaPredicted RBP12.14□□□□□ -0.47
PRPF38B-202ENST00000370022 SEC22CQ9BRL7 303 aa12.14□□□□□ -0.47
PRPF38B-202ENST00000370022 HINT2Q9BX68 163 aa12.14□□□□□ -0.47
PRPF38B-202ENST00000370022 PLXNB1O43157 2135 aa12.14□□□□□ -0.47
PRPF38B-202ENST00000370022 TNCP24821 2201 aa12.14□□□□□ -0.47
PRPF38B-202ENST00000370022 SNRPGP15A8MWD9 76 aa12.13□□□□□ -0.47
PRPF38B-202ENST00000370022 HOXB5P09067 269 aa12.13□□□□□ -0.47
PRPF38B-202ENST00000370022 APELAP0DMC3 54 aa12.13□□□□□ -0.47
PRPF38B-202ENST00000370022 RAB9AP51151 201 aa12.13□□□□□ -0.47
PRPF38B-202ENST00000370022 SPCS3P61009 180 aa12.13□□□□□ -0.47
PRPF38B-202ENST00000370022 GGNBP1Q5YKI7 109 aa12.13□□□□□ -0.47
PRPF38B-202ENST00000370022 NDUFA11Q86Y39 141 aa12.13□□□□□ -0.47
PRPF38B-202ENST00000370022 PLEKHA3Q9HB20 300 aa12.13□□□□□ -0.47
PRPF38B-202ENST00000370022 ZNF355PQ9NSJ1 428 aa12.13□□□□□ -0.47
PRPF38B-202ENST00000370022 INS-IGF2F8WCM5 200 aa12.13□□□□□ -0.47
PRPF38B-202ENST00000370022 AREGP15514 252 aa12.13□□□□□ -0.47
PRPF38B-202ENST00000370022 CTRB1P17538 263 aa12.13□□□□□ -0.47
PRPF38B-202ENST00000370022 CTRB2Q6GPI1 263 aa12.13□□□□□ -0.47
PRPF38B-202ENST00000370022 C12orf45Q8N5I9 185 aaPredicted RBP12.13□□□□□ -0.47
PRPF38B-202ENST00000370022 OR10W1Q8NGF6 305 aa12.13□□□□□ -0.47
PRPF38B-202ENST00000370022 MYOZ3Q8TDC0 251 aa12.13□□□□□ -0.47
PRPF38B-202ENST00000370022 BOLA2-SMG1P6H3BVE0 249 aa12.12□□□□□ -0.47
PRPF38B-202ENST00000370022 CYB5BO43169 146 aa12.12□□□□□ -0.47
PRPF38B-202ENST00000370022 RPLP1P05386 114 aaKnown RBP12.12□□□□□ -0.47
PRPF38B-202ENST00000370022 OR13C7P0DN81 318 aa12.12□□□□□ -0.47
PRPF38B-202ENST00000370022 CDX1P47902 265 aaPredicted RBP12.12□□□□□ -0.47
PRPF38B-202ENST00000370022 WT1-ASQ06250 92 aa12.12□□□□□ -0.47
PRPF38B-202ENST00000370022 KHDC1LQ5JSQ8 128 aa12.12□□□□□ -0.47
PRPF38B-202ENST00000370022 OR1S1Q8NH92 325 aa12.12□□□□□ -0.47
PRPF38B-202ENST00000370022 UBE2E2Q96LR5 201 aa12.12□□□□□ -0.47
PRPF38B-202ENST00000370022 KLK15Q9H2R5 256 aa12.12□□□□□ -0.47
PRPF38B-202ENST00000370022 ENY2Q9NPA8 101 aa12.12□□□□□ -0.47
PRPF38B-202ENST00000370022 A0A0G2JLM5 398 aa12.11□□□□□ -0.47
PRPF38B-202ENST00000370022 PITX3O75364 302 aa12.11□□□□□ -0.47
PRPF38B-202ENST00000370022 ADAP1O75689 374 aa12.11□□□□□ -0.47
PRPF38B-202ENST00000370022 TRGV3P03979 118 aa12.11□□□□□ -0.47
PRPF38B-202ENST00000370022 DEFA4P12838 97 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms