RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 PRCDQ00LT1 54 aa11.29□□□□□ -0.6
HMGCS2-201ENST00000369406 HEYLQ9NQ87 328 aaPredicted RBP11.29□□□□□ -0.6
HMGCS2-201ENST00000369406 FCN1O00602 326 aa11.29□□□□□ -0.6
HMGCS2-201ENST00000369406 IGKV1D-33P01593 117 aa11.29□□□□□ -0.6
HMGCS2-201ENST00000369406 IGKV1-33P01594 117 aa11.29□□□□□ -0.6
HMGCS2-201ENST00000369406 RPL8P62917 257 aaKnown RBP11.29□□□□□ -0.6
HMGCS2-201ENST00000369406 C19orf35Q6ZS72 473 aa11.29□□□□□ -0.6
HMGCS2-201ENST00000369406 CLCC1Q96S66 551 aa11.29□□□□□ -0.6
HMGCS2-201ENST00000369406 REG4Q9BYZ8 158 aa11.29□□□□□ -0.6
HMGCS2-201ENST00000369406 FBXL15Q9H469 300 aa11.29□□□□□ -0.6
HMGCS2-201ENST00000369406 AVPP01185 164 aa11.28□□□□□ -0.6
HMGCS2-201ENST00000369406 SAA4P35542 130 aa11.28□□□□□ -0.6
HMGCS2-201ENST00000369406 UBE2E1P51965 193 aa11.28□□□□□ -0.6
HMGCS2-201ENST00000369406 DEFB113Q30KQ7 82 aa11.28□□□□□ -0.6
HMGCS2-201ENST00000369406 FAM120AOSQ5T036 256 aa11.28□□□□□ -0.6
HMGCS2-201ENST00000369406 NDUFA4L2Q9NRX3 87 aa11.28□□□□□ -0.6
HMGCS2-201ENST00000369406 ZNF257Q9Y2Q1 563 aa11.28□□□□□ -0.6
HMGCS2-201ENST00000369406 BORCS7-ASMTA0A0B4J1R7 106 aa11.28□□□□□ -0.6
HMGCS2-201ENST00000369406 UBE2L5PA0A1B0GUS4 154 aa11.28□□□□□ -0.6
HMGCS2-201ENST00000369406 USF1P22415 310 aaPredicted RBP11.28□□□□□ -0.6
HMGCS2-201ENST00000369406 RAB14P61106 215 aa11.28□□□□□ -0.6
HMGCS2-201ENST00000369406 CIB3Q96Q77 187 aaPredicted RBP11.28□□□□□ -0.6
HMGCS2-201ENST00000369406 RSG1Q9BU20 258 aa11.28□□□□□ -0.6
HMGCS2-201ENST00000369406 SIGLEC9Q9Y336 463 aa11.28□□□□□ -0.6
HMGCS2-201ENST00000369406 CA2P00918 260 aa11.27□□□□□ -0.6
HMGCS2-201ENST00000369406 IFNA10P01566 189 aa11.27□□□□□ -0.6
HMGCS2-201ENST00000369406 SNRNP70P08621 437 aaKnown RBP11.27□□□□□ -0.6
HMGCS2-201ENST00000369406 IGHV4-38-2P0DP08 117 aa11.27□□□□□ -0.6
HMGCS2-201ENST00000369406 WT1-ASQ06250 92 aa11.27□□□□□ -0.6
HMGCS2-201ENST00000369406 LINC00518Q8N0U6 118 aa11.27□□□□□ -0.6
HMGCS2-201ENST00000369406 MSMBP08118 114 aa11.27□□□□□ -0.61
HMGCS2-201ENST00000369406 FGF2P09038 288 aa11.27□□□□□ -0.61
HMGCS2-201ENST00000369406 APELAP0DMC3 54 aa11.27□□□□□ -0.61
HMGCS2-201ENST00000369406 LGALS7P47929 136 aa11.27□□□□□ -0.61
HMGCS2-201ENST00000369406 PRSS8Q16651 343 aa11.27□□□□□ -0.61
HMGCS2-201ENST00000369406 BRD3OSQ6XYD6 125 aa11.27□□□□□ -0.61
HMGCS2-201ENST00000369406 TMEM182Q6ZP80 229 aaPredicted RBP11.27□□□□□ -0.61
HMGCS2-201ENST00000369406 LILRB2Q8N423 598 aa11.27□□□□□ -0.61
HMGCS2-201ENST00000369406 C1orf159Q96HA4 380 aa11.27□□□□□ -0.61
HMGCS2-201ENST00000369406 EAF1Q96JC9 268 aaPredicted RBP11.27□□□□□ -0.61
HMGCS2-201ENST00000369406 METTL1Q9UBP6 276 aaKnown RBP11.27□□□□□ -0.61
HMGCS2-201ENST00000369406 RNF223E7ERA6 249 aa11.26□□□□□ -0.61
HMGCS2-201ENST00000369406 SULT1A2P50226 295 aa11.26□□□□□ -0.61
HMGCS2-201ENST00000369406 DSCR9P59020 149 aa11.26□□□□□ -0.61
HMGCS2-201ENST00000369406 BTN1A1Q13410 526 aa11.26□□□□□ -0.61
HMGCS2-201ENST00000369406 ZNF266Q14584 549 aa11.26□□□□□ -0.61
HMGCS2-201ENST00000369406 VMA21Q3ZAQ7 101 aa11.26□□□□□ -0.61
HMGCS2-201ENST00000369406 PLEKHA3Q9HB20 300 aa11.26□□□□□ -0.61
HMGCS2-201ENST00000369406 TRAV40A0A0B4J280 105 aa11.26□□□□□ -0.61
HMGCS2-201ENST00000369406 NPFFO15130 113 aa11.26□□□□□ -0.61
HMGCS2-201ENST00000369406 REG1AP05451 166 aa11.26□□□□□ -0.61
HMGCS2-201ENST00000369406 CD1BP29016 333 aa11.26□□□□□ -0.61
HMGCS2-201ENST00000369406 CEACAM3P40198 252 aa11.26□□□□□ -0.61
HMGCS2-201ENST00000369406 Q5PR19 223 aa11.26□□□□□ -0.61
HMGCS2-201ENST00000369406 MINOS1Q5TGZ0 78 aa11.26□□□□□ -0.61
HMGCS2-201ENST00000369406 SLC24A4Q8NFF2 622 aa11.26□□□□□ -0.61
HMGCS2-201ENST00000369406 OR5B3Q8NH48 314 aa11.26□□□□□ -0.61
HMGCS2-201ENST00000369406 OR4A5Q8NH83 315 aa11.26□□□□□ -0.61
HMGCS2-201ENST00000369406 VSIRQ9H7M9 311 aa11.26□□□□□ -0.61
HMGCS2-201ENST00000369406 MINOS1-NBL1R4GNA1 71 aa11.26□□□□□ -0.61
HMGCS2-201ENST00000369406 ZNF705EA8MWA4 302 aaPredicted RBP11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 SEC11BP0C7V7 166 aa11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 RNASE2P10153 161 aaKnown RBP11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 SLC25A16P16260 332 aa11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 HBG1P69891 147 aa11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 HBG2P69892 147 aa11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 TUSC1Q2TAM9 212 aa11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 LRRC75BQ2VPJ9 315 aa11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 BSXQ3C1V8 233 aa11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 Q8N6K4 173 aa11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 TEX45Q8NA69 505 aa11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 TSNAXQ99598 290 aaKnown RBP11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 COMMD5Q9GZQ3 224 aa11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 WDR61Q9GZS3 305 aaKnown RBP11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 HIPK2Q9H2X6 1198 aa11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 BEX4Q9NWD9 120 aaPredicted RBP11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 MDKP21741 143 aaPredicted RBP11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 LGALS4P56470 323 aa11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 GNB1P62873 340 aa11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 EIF5AP63241 154 aaKnown RBP11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 MLANAQ16655 118 aa11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 VWC2Q2TAL6 325 aa11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 ETV3LQ6ZN32 361 aa11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 OR1L8Q8NGR8 309 aa11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 VSTM2AQ8TAG5 236 aa11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 RNF141Q8WVD5 230 aa11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 HIF1ANQ9NWT6 349 aa11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 CACFD1Q9UGQ2 172 aa11.25□□□□□ -0.61
HMGCS2-201ENST00000369406 MFSD2BA6NFX1 497 aa11.24□□□□□ -0.61
HMGCS2-201ENST00000369406 EIF3GO75821 320 aaKnown RBP eCLIP11.24□□□□□ -0.61
HMGCS2-201ENST00000369406 DFFBO76075 338 aa11.24□□□□□ -0.61
HMGCS2-201ENST00000369406 OR8U8P0C7N1 319 aa11.24□□□□□ -0.61
HMGCS2-201ENST00000369406 AREGP15514 252 aa11.24□□□□□ -0.61
HMGCS2-201ENST00000369406 NPY1RP25929 384 aa11.24□□□□□ -0.61
HMGCS2-201ENST00000369406 MMDQ15546 238 aa11.24□□□□□ -0.61
HMGCS2-201ENST00000369406 TNXAQ16473 311 aa11.24□□□□□ -0.61
HMGCS2-201ENST00000369406 ARSJQ5FYB0 599 aaPredicted RBP11.24□□□□□ -0.61
HMGCS2-201ENST00000369406 KLF17Q5JT82 389 aaPredicted RBP11.24□□□□□ -0.61
HMGCS2-201ENST00000369406 LINC00469Q8N7U9 141 aa11.24□□□□□ -0.61
HMGCS2-201ENST00000369406 OR10P1Q8NGE3 313 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms