RNA–Protein interactions for RNA: ENST00000368460.7

PBXIP1-201, Transcript of PBX homeobox interacting protein 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PBXIP1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBXIP1-201ENST00000368460 PRR20EP86478 221 aa13.58□□□□□ -0.24
PBXIP1-201ENST00000368460 PRR20CP86479 221 aa13.58□□□□□ -0.24
PBXIP1-201ENST00000368460 PRR20DP86480 221 aa13.58□□□□□ -0.24
PBXIP1-201ENST00000368460 PRR20BP86481 221 aa13.58□□□□□ -0.24
PBXIP1-201ENST00000368460 PRR20AP86496 221 aa13.58□□□□□ -0.24
PBXIP1-201ENST00000368460 EIF4EBP1Q13541 118 aaPredicted RBP13.58□□□□□ -0.24
PBXIP1-201ENST00000368460 Q56UQ5 140 aa13.58□□□□□ -0.24
PBXIP1-201ENST00000368460 THOC7Q6I9Y2 204 aaKnown RBP13.58□□□□□ -0.24
PBXIP1-201ENST00000368460 GDPD1Q8N9F7 314 aa13.58□□□□□ -0.24
PBXIP1-201ENST00000368460 C11orf68Q9H3H3 251 aaKnown RBP13.58□□□□□ -0.24
PBXIP1-201ENST00000368460 CCL28Q9NRJ3 127 aa13.58□□□□□ -0.24
PBXIP1-201ENST00000368460 C21orf62Q9NYP8 219 aa13.58□□□□□ -0.24
PBXIP1-201ENST00000368460 IGKV3-7A0A075B6H7 116 aa13.57□□□□□ -0.24
PBXIP1-201ENST00000368460 IGLL5B9A064 214 aa13.57□□□□□ -0.24
PBXIP1-201ENST00000368460 SULT1C2O00338 296 aa13.57□□□□□ -0.24
PBXIP1-201ENST00000368460 SCGNO76038 276 aa13.57□□□□□ -0.24
PBXIP1-201ENST00000368460 HPRT1P00492 218 aa13.57□□□□□ -0.24
PBXIP1-201ENST00000368460 TRAPPC2P0DI81 140 aa13.57□□□□□ -0.24
PBXIP1-201ENST00000368460 TRAPPC2BP0DI82 140 aa13.57□□□□□ -0.24
PBXIP1-201ENST00000368460 HSD17B13Q7Z5P4 300 aaPredicted RBP13.57□□□□□ -0.24
PBXIP1-201ENST00000368460 CENPSQ8N2Z9 138 aa13.57□□□□□ -0.24
PBXIP1-201ENST00000368460 OR10W1Q8NGF6 305 aa13.57□□□□□ -0.24
PBXIP1-201ENST00000368460 HINT2Q9BX68 163 aa13.57□□□□□ -0.24
PBXIP1-201ENST00000368460 TMEM140Q9NV12 185 aa13.57□□□□□ -0.24
PBXIP1-201ENST00000368460 TRAV3A0A0B4J244 114 aa13.56□□□□□ -0.24
PBXIP1-201ENST00000368460 K7EMT4 169 aa13.56□□□□□ -0.24
PBXIP1-201ENST00000368460 DEFB4AO15263 64 aa13.56□□□□□ -0.24
PBXIP1-201ENST00000368460 RBFOX2O43251 390 aaKnown RBP eCLIP13.56□□□□□ -0.241e-6■■□□□ 13.2
PBXIP1-201ENST00000368460 XRCC3O43542 346 aa13.56□□□□□ -0.24
PBXIP1-201ENST00000368460 MRPS14O60783 128 aaKnown RBP13.56□□□□□ -0.24
PBXIP1-201ENST00000368460 YIF1AO95070 293 aa13.56□□□□□ -0.24
PBXIP1-201ENST00000368460 FCGR2CP31995 323 aa13.56□□□□□ -0.24
PBXIP1-201ENST00000368460 ERVK-16P61578 105 aa13.56□□□□□ -0.24
PBXIP1-201ENST00000368460 ZNF124Q15973 351 aa13.56□□□□□ -0.24
PBXIP1-201ENST00000368460 ZBTB34Q8NCN2 500 aa13.56□□□□□ -0.24
PBXIP1-201ENST00000368460 OR13F1Q8NGS4 319 aa13.56□□□□□ -0.24
PBXIP1-201ENST00000368460 CHRDL1Q9BU40 450 aa13.56□□□□□ -0.24
PBXIP1-201ENST00000368460 SLC5A7Q9GZV3 580 aa13.56□□□□□ -0.24
PBXIP1-201ENST00000368460 DUSP21Q9H596 190 aa13.56□□□□□ -0.24
PBXIP1-201ENST00000368460 SMIM30A4D0T7 59 aa13.55□□□□□ -0.24
PBXIP1-201ENST00000368460 C15orf62A8K5M9 175 aa13.55□□□□□ -0.24
PBXIP1-201ENST00000368460 CA1P00915 261 aaPredicted RBP13.55□□□□□ -0.24
PBXIP1-201ENST00000368460 SERPINE2P07093 398 aa13.55□□□□□ -0.24
PBXIP1-201ENST00000368460 ADMP35318 185 aa13.55□□□□□ -0.24
PBXIP1-201ENST00000368460 MSMO1Q15800 293 aa13.55□□□□□ -0.24
PBXIP1-201ENST00000368460 PRSS48Q7RTY5 328 aa13.55□□□□□ -0.24
PBXIP1-201ENST00000368460 OR51H1Q8NH63 302 aa13.55□□□□□ -0.24
PBXIP1-201ENST00000368460 RNF2Q99496 336 aa13.55□□□□□ -0.24
PBXIP1-201ENST00000368460 SMPXQ9UHP9 88 aa13.55□□□□□ -0.24
PBXIP1-201ENST00000368460 MFAP2P55001 183 aa13.54□□□□□ -0.24
PBXIP1-201ENST00000368460 FXYD4P59646 89 aa13.54□□□□□ -0.24
PBXIP1-201ENST00000368460 PAFAH1B2P68402 229 aa13.54□□□□□ -0.24
PBXIP1-201ENST00000368460 RELQ04864 619 aaPredicted RBP13.54□□□□□ -0.24
PBXIP1-201ENST00000368460 TMEM187Q14656 261 aa13.54□□□□□ -0.24
PBXIP1-201ENST00000368460 AADACL3Q5VUY0 350 aa13.54□□□□□ -0.24
PBXIP1-201ENST00000368460 TMEM116Q8NCL8 245 aa13.54□□□□□ -0.24
PBXIP1-201ENST00000368460 OR1L8Q8NGR8 309 aa13.54□□□□□ -0.24
PBXIP1-201ENST00000368460 ATP6V0BQ99437 205 aa13.54□□□□□ -0.24
PBXIP1-201ENST00000368460 RHPN1-AS1Q9BWJ2 59 aa13.54□□□□□ -0.24
PBXIP1-201ENST00000368460 IGHV3-49A0A0A0MS15 119 aa13.53□□□□□ -0.24
PBXIP1-201ENST00000368460 C11orf94C9JXX5 98 aa13.53□□□□□ -0.24
PBXIP1-201ENST00000368460 NUPL2O15504 423 aaKnown RBP13.53□□□□□ -0.24
PBXIP1-201ENST00000368460 PPYP01298 95 aa13.53□□□□□ -0.24
PBXIP1-201ENST00000368460 EIF4EP06730 217 aaKnown RBP13.53□□□□□ -0.24
PBXIP1-201ENST00000368460 POU2AF1Q16633 256 aa13.53□□□□□ -0.24
PBXIP1-201ENST00000368460 C22orf42Q6IC83 251 aa13.53□□□□□ -0.24
PBXIP1-201ENST00000368460 LINC00336Q6ZUF6 198 aa13.53□□□□□ -0.24
PBXIP1-201ENST00000368460 ZNF367Q7RTV3 350 aa13.53□□□□□ -0.24
PBXIP1-201ENST00000368460 GBGT1Q8N5D6 347 aa13.53□□□□□ -0.24
PBXIP1-201ENST00000368460 BEST4Q8NFU0 473 aa13.53□□□□□ -0.24
PBXIP1-201ENST00000368460 SCARB1Q8WTV0 552 aa13.53□□□□□ -0.24
PBXIP1-201ENST00000368460 LSM10Q969L4 123 aaKnown RBP13.53□□□□□ -0.24
PBXIP1-201ENST00000368460 F11RQ9Y624 299 aaKnown RBP13.53□□□□□ -0.24
PBXIP1-201ENST00000368460 DNAH10Q8IVF4 4471 aa13.52□□□□□ -0.24
PBXIP1-201ENST00000368460 IGHV7-4-1A0A0J9YVY3 117 aa13.52□□□□□ -0.25
PBXIP1-201ENST00000368460 WT1-ASQ06250 92 aa13.52□□□□□ -0.25
PBXIP1-201ENST00000368460 NR2C2APQ86WQ0 139 aa13.52□□□□□ -0.25
PBXIP1-201ENST00000368460 TMEM17Q86X19 198 aa13.52□□□□□ -0.25
PBXIP1-201ENST00000368460 PLEKHA2Q9HB19 425 aa13.52□□□□□ -0.25
PBXIP1-201ENST00000368460 COMMD9Q9P000 198 aa13.52□□□□□ -0.25
PBXIP1-201ENST00000368460 ETV7Q9Y603 341 aa13.52□□□□□ -0.25
PBXIP1-201ENST00000368460 PCLOQ9Y6V0 5065 aa13.51□□□□□ -0.25
PBXIP1-201ENST00000368460 TEX50A0A1B0GTY4 177 aa13.51□□□□□ -0.25
PBXIP1-201ENST00000368460 TRDV1A0A1B0GX56 115 aa13.51□□□□□ -0.25
PBXIP1-201ENST00000368460 CHEK1O14757 476 aa13.51□□□□□ -0.25
PBXIP1-201ENST00000368460 SSX5O60225 188 aa13.51□□□□□ -0.25
PBXIP1-201ENST00000368460 SNAPC5O75971 98 aa13.51□□□□□ -0.25
PBXIP1-201ENST00000368460 FGF2P09038 288 aa13.51□□□□□ -0.25
PBXIP1-201ENST00000368460 APLNQ9ULZ1 77 aa13.51□□□□□ -0.25
PBXIP1-201ENST00000368460 NOTOA8MTQ0 251 aa13.5□□□□□ -0.25
PBXIP1-201ENST00000368460 DNASE2O00115 360 aaPredicted RBP13.5□□□□□ -0.25
PBXIP1-201ENST00000368460 PTHLHP12272 177 aa13.5□□□□□ -0.25
PBXIP1-201ENST00000368460 HERV-K104P61576 105 aa13.5□□□□□ -0.25
PBXIP1-201ENST00000368460 TBCEQ15813 527 aaPredicted RBP13.5□□□□□ -0.25
PBXIP1-201ENST00000368460 GVQW1Q8N7I0 195 aa13.5□□□□□ -0.25
PBXIP1-201ENST00000368460 TSPAN14Q8NG11 270 aa13.5□□□□□ -0.25
PBXIP1-201ENST00000368460 BORCS5Q969J3 196 aa13.5□□□□□ -0.25
PBXIP1-201ENST00000368460 TMEM56Q96MV1 263 aa13.5□□□□□ -0.25
PBXIP1-201ENST00000368460 NDUFB11Q9NX14 153 aa13.5□□□□□ -0.25
PBXIP1-201ENST00000368460 DAPK2Q9UIK4 370 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms