RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 SP6Q3SY56 376 aa11.74□□□□□ -0.53
SMPDL3A-201ENST00000368440 ETV3LQ6ZN32 361 aa11.74□□□□□ -0.53
SMPDL3A-201ENST00000368440 SGPP2Q8IWX5 399 aa11.74□□□□□ -0.53
SMPDL3A-201ENST00000368440 OR5T1Q8NG75 326 aa11.74□□□□□ -0.53
SMPDL3A-201ENST00000368440 OR4F17Q8NGA8 305 aa11.74□□□□□ -0.53
SMPDL3A-201ENST00000368440 OR4F4Q96R69 305 aa11.74□□□□□ -0.53
SMPDL3A-201ENST00000368440 TP53RKQ96S44 253 aa11.74□□□□□ -0.53
SMPDL3A-201ENST00000368440 NUDT19A8MXV4 375 aa11.74□□□□□ -0.53
SMPDL3A-201ENST00000368440 DUS4LO95620 317 aaKnown RBP11.74□□□□□ -0.53
SMPDL3A-201ENST00000368440 KRASP01116 189 aa11.74□□□□□ -0.53
SMPDL3A-201ENST00000368440 RAB9AP51151 201 aa11.74□□□□□ -0.53
SMPDL3A-201ENST00000368440 DHODHQ02127 395 aa11.74□□□□□ -0.53
SMPDL3A-201ENST00000368440 ANKRD55Q3KP44 614 aa11.74□□□□□ -0.53
SMPDL3A-201ENST00000368440 TCTE3Q8IZS6 198 aa11.74□□□□□ -0.53
SMPDL3A-201ENST00000368440 MITD1Q8WV92 249 aa11.74□□□□□ -0.53
SMPDL3A-201ENST00000368440 MS4A10Q96PG2 267 aa11.74□□□□□ -0.53
SMPDL3A-201ENST00000368440 GNB4Q9HAV0 340 aa11.74□□□□□ -0.53
SMPDL3A-201ENST00000368440 CRYM-AS1A6NIL9 109 aa11.73□□□□□ -0.53
SMPDL3A-201ENST00000368440 UPK2O00526 184 aa11.73□□□□□ -0.53
SMPDL3A-201ENST00000368440 ACTL6BO94805 426 aa11.73□□□□□ -0.53
SMPDL3A-201ENST00000368440 CDX1P47902 265 aaPredicted RBP11.73□□□□□ -0.53
SMPDL3A-201ENST00000368440 H2BFSP57053 126 aa11.73□□□□□ -0.53
SMPDL3A-201ENST00000368440 RPL8P62917 257 aaKnown RBP11.73□□□□□ -0.53
SMPDL3A-201ENST00000368440 DEFB136Q30KP8 78 aa11.73□□□□□ -0.53
SMPDL3A-201ENST00000368440 TMEM65Q6PI78 240 aa11.73□□□□□ -0.53
SMPDL3A-201ENST00000368440 ZNF695Q8IW36 515 aa11.73□□□□□ -0.53
SMPDL3A-201ENST00000368440 ZNF491Q8N8L2 437 aa11.73□□□□□ -0.53
SMPDL3A-201ENST00000368440 OR5M8Q8NGP6 311 aa11.73□□□□□ -0.53
SMPDL3A-201ENST00000368440 DUX3Q96PT4 197 aa11.73□□□□□ -0.53
SMPDL3A-201ENST00000368440 AIFM2Q9BRQ8 373 aa11.73□□□□□ -0.53
SMPDL3A-201ENST00000368440 FAM212BQ9NTI7 297 aaPredicted RBP11.73□□□□□ -0.53
SMPDL3A-201ENST00000368440 C3orf85A0A1B0GTC6 90 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 CGB1A6NKQ9 187 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 TEX22C9J3V5 150 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 H0Y980 276 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 OR5AC1P0C628 307 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 HLA-GP17693 338 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 RPL27AP46776 148 aaKnown RBP11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 ERVK-16P61578 105 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 CCDC71LQ8N9Z2 235 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 OR2T35Q8NGX2 323 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 OR4A5Q8NH83 315 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 NAA60Q9H7X0 242 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 C13orf42A0A1B0GVH6 325 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 ADAP1O75689 374 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 OR9G9P0C7N8 305 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 MAS1LP35410 378 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 DEFA5Q01523 94 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 Q5BKY6 102 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 C19orf35Q6ZS72 473 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 COQ8AQ8NI60 647 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 SEC22AQ96IW7 307 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 OR5B12Q96R08 314 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 PDCD10Q9BUL8 212 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 NSG2Q9Y328 171 aa11.72□□□□□ -0.53
SMPDL3A-201ENST00000368440 MGAM2Q2M2H8 2515 aa11.71□□□□□ -0.53
SMPDL3A-201ENST00000368440 C5orf51A6NDU8 294 aa11.71□□□□□ -0.53
SMPDL3A-201ENST00000368440 HOXB5P09067 269 aa11.71□□□□□ -0.53
SMPDL3A-201ENST00000368440 TPPP2P59282 170 aa11.71□□□□□ -0.53
SMPDL3A-201ENST00000368440 NOXA1Q86UR1 476 aa11.71□□□□□ -0.53
SMPDL3A-201ENST00000368440 RAX2Q96IS3 184 aa11.71□□□□□ -0.53
SMPDL3A-201ENST00000368440 SPIN2AQ99865 258 aa11.71□□□□□ -0.53
SMPDL3A-201ENST00000368440 SPIN2BQ9BPZ2 258 aa11.71□□□□□ -0.53
SMPDL3A-201ENST00000368440 ZNF355PQ9NSJ1 428 aa11.71□□□□□ -0.53
SMPDL3A-201ENST00000368440 COA4Q9NYJ1 87 aa11.71□□□□□ -0.53
SMPDL3A-201ENST00000368440 KCNIP3Q9Y2W7 256 aa11.71□□□□□ -0.53
SMPDL3A-201ENST00000368440 RBMXL2O75526 392 aaKnown RBP11.7□□□□□ -0.54
SMPDL3A-201ENST00000368440 PF4P02776 101 aa11.7□□□□□ -0.54
SMPDL3A-201ENST00000368440 TRGV3P03979 118 aa11.7□□□□□ -0.54
SMPDL3A-201ENST00000368440 SERPINE2P07093 398 aa11.7□□□□□ -0.54
SMPDL3A-201ENST00000368440 C4orf3Q8WVX3 66 aa11.7□□□□□ -0.54
SMPDL3A-201ENST00000368440 UBE2E2Q96LR5 201 aa11.7□□□□□ -0.54
SMPDL3A-201ENST00000368440 TMEM68Q96MH6 324 aa11.7□□□□□ -0.54
SMPDL3A-201ENST00000368440 DBX1A6NMT0 343 aa11.7□□□□□ -0.54
SMPDL3A-201ENST00000368440 IGKV1-5P01602 117 aa11.7□□□□□ -0.54
SMPDL3A-201ENST00000368440 PRH1P02810 166 aa11.7□□□□□ -0.54
SMPDL3A-201ENST00000368440 AREGP15514 252 aa11.7□□□□□ -0.54
SMPDL3A-201ENST00000368440 UCP1P25874 307 aa11.7□□□□□ -0.54
SMPDL3A-201ENST00000368440 OR2B8PP59922 312 aa11.7□□□□□ -0.54
SMPDL3A-201ENST00000368440 IZUMO4Q1ZYL8 232 aa11.7□□□□□ -0.54
SMPDL3A-201ENST00000368440 MPTX1A8MV57 137 aa11.69□□□□□ -0.54
SMPDL3A-201ENST00000368440 I3L521 148 aa11.69□□□□□ -0.54
SMPDL3A-201ENST00000368440 IGHV3-11P01762 117 aa11.69□□□□□ -0.54
SMPDL3A-201ENST00000368440 C1QBP02746 253 aa11.69□□□□□ -0.54
SMPDL3A-201ENST00000368440 GIPP09681 153 aaPredicted RBP11.69□□□□□ -0.54
SMPDL3A-201ENST00000368440 LRRC37A5PQ49AS3 106 aa11.69□□□□□ -0.54
SMPDL3A-201ENST00000368440 FAM219AQ8IW50 185 aa11.69□□□□□ -0.54
SMPDL3A-201ENST00000368440 LHFPL5Q8TAF8 219 aa11.69□□□□□ -0.54
SMPDL3A-201ENST00000368440 P2RX4Q99571 388 aa11.69□□□□□ -0.54
SMPDL3A-201ENST00000368440 SLA2Q9H6Q3 261 aa11.69□□□□□ -0.54
SMPDL3A-201ENST00000368440 TEX50A0A1B0GTY4 177 aa11.68□□□□□ -0.54
SMPDL3A-201ENST00000368440 H3BUA1 57 aa11.68□□□□□ -0.54
SMPDL3A-201ENST00000368440 REG1AP05451 166 aa11.68□□□□□ -0.54
SMPDL3A-201ENST00000368440 TMEM187Q14656 261 aa11.68□□□□□ -0.54
SMPDL3A-201ENST00000368440 MRPL41Q8IXM3 137 aaKnown RBP11.68□□□□□ -0.54
SMPDL3A-201ENST00000368440 TTC9CQ8N5M4 171 aa11.68□□□□□ -0.54
SMPDL3A-201ENST00000368440 LINC00482Q8N8I6 264 aa11.68□□□□□ -0.54
SMPDL3A-201ENST00000368440 OR11H4Q8NGC9 324 aa11.68□□□□□ -0.54
SMPDL3A-201ENST00000368440 GLYATL2Q8WU03 294 aa11.68□□□□□ -0.54
SMPDL3A-201ENST00000368440 COMMD5Q9GZQ3 224 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms