RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 SLC35B1P78383 322 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 PAX2Q02962 417 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 KCNS1Q96KK3 526 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 HIST1H4GQ99525 98 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 IGKV1-9A0A0C4DH69 117 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 TMEM262E9PQX1 116 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 IL4P05112 153 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 CECR9P0C854 216 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 GPR6P46095 362 aaPredicted RBP11.24□□□□□ -0.61
PTPRK-204ENST00000368210 DEPPQ9NTK1 212 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 ZNF319Q9P2F9 582 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 WNT9BO14905 357 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 LHX2P50458 406 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 KIAA1644Q3SXP7 199 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 MMD2Q8IY49 270 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 GFI1Q99684 422 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 KLHDC3Q9BQ90 382 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 AP5S1Q9NUS5 200 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 TSC2P49815 1807 aa11.24□□□□□ -0.61
PTPRK-204ENST00000368210 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.23□□□□□ -0.61
PTPRK-204ENST00000368210 GAGE12BA1L429 117 aa11.23□□□□□ -0.61
PTPRK-204ENST00000368210 SERF1AO75920 110 aa11.23□□□□□ -0.61
PTPRK-204ENST00000368210 SSTR5P35346 364 aa11.23□□□□□ -0.61
PTPRK-204ENST00000368210 GLRXP35754 106 aa11.23□□□□□ -0.61
PTPRK-204ENST00000368210 RPL27AP46776 148 aaKnown RBP11.23□□□□□ -0.61
PTPRK-204ENST00000368210 TIMM23BQ5SRD1 257 aa11.23□□□□□ -0.61
PTPRK-204ENST00000368210 IBA57Q5T440 356 aaKnown RBP11.23□□□□□ -0.61
PTPRK-204ENST00000368210 CCDC144NLQ6NUI1 221 aa11.23□□□□□ -0.61
PTPRK-204ENST00000368210 TMEM140Q9NV12 185 aa11.23□□□□□ -0.61
PTPRK-204ENST00000368210 IGHV3-72A0A0B4J1Y9 119 aa11.23□□□□□ -0.61
PTPRK-204ENST00000368210 OR2T8A6NH00 312 aa11.23□□□□□ -0.61
PTPRK-204ENST00000368210 CLDN18P56856 261 aa11.23□□□□□ -0.61
PTPRK-204ENST00000368210 IDI2-AS1Q9NZ38 188 aa11.23□□□□□ -0.61
PTPRK-204ENST00000368210 TP53BP1Q12888 1972 aaPredicted RBP11.23□□□□□ -0.61
PTPRK-204ENST00000368210 RTBDNQ9BSG5 229 aaPredicted RBP11.23□□□□□ -0.61
PTPRK-204ENST00000368210 COX11Q9Y6N1 276 aa11.23□□□□□ -0.61
PTPRK-204ENST00000368210 GOSR1O95249 250 aa11.23□□□□□ -0.61
PTPRK-204ENST00000368210 CCL1P22362 96 aa11.23□□□□□ -0.61
PTPRK-204ENST00000368210 RPL8P62917 257 aaKnown RBP11.23□□□□□ -0.61
PTPRK-204ENST00000368210 PSMG4Q5JS54 123 aa11.23□□□□□ -0.61
PTPRK-204ENST00000368210 GRAMD2BQ96HH9 432 aa11.23□□□□□ -0.61
PTPRK-204ENST00000368210 A8MWL6 223 aa11.22□□□□□ -0.61
PTPRK-204ENST00000368210 ZG16O60844 167 aa11.22□□□□□ -0.61
PTPRK-204ENST00000368210 COX6CP09669 75 aa11.22□□□□□ -0.61
PTPRK-204ENST00000368210 TMPRSS3P57727 454 aa11.22□□□□□ -0.61
PTPRK-204ENST00000368210 LEAP2Q969E1 77 aa11.22□□□□□ -0.61
PTPRK-204ENST00000368210 ZNF716A6NP11 495 aa11.22□□□□□ -0.61
PTPRK-204ENST00000368210 CXCL1P09341 107 aa11.22□□□□□ -0.61
PTPRK-204ENST00000368210 SCGB1A1P11684 91 aa11.22□□□□□ -0.61
PTPRK-204ENST00000368210 COL8A1P27658 744 aa11.22□□□□□ -0.61
PTPRK-204ENST00000368210 HSPE1P61604 102 aaKnown RBP11.22□□□□□ -0.61
PTPRK-204ENST00000368210 TMEM249Q2WGJ8 235 aa11.22□□□□□ -0.61
PTPRK-204ENST00000368210 IGHV3-21A0A0B4J1V1 117 aa11.22□□□□□ -0.61
PTPRK-204ENST00000368210 PSG7Q13046 419 aa11.22□□□□□ -0.61
PTPRK-204ENST00000368210 ZNF324BQ6AW86 544 aaPredicted RBP11.22□□□□□ -0.61
PTPRK-204ENST00000368210 A0A1B0GW15 77 aa11.21□□□□□ -0.61
PTPRK-204ENST00000368210 HIST1H1AQ02539 215 aaPredicted RBP11.21□□□□□ -0.61
PTPRK-204ENST00000368210 ZNRF1Q8ND25 227 aa11.21□□□□□ -0.61
PTPRK-204ENST00000368210 IFNL4K9M1U5 179 aa11.21□□□□□ -0.61
PTPRK-204ENST00000368210 RBFOX2O43251 390 aaKnown RBP eCLIP11.21□□□□□ -0.611e-6■■■■■ 27.3
PTPRK-204ENST00000368210 CLPSP04118 112 aa11.21□□□□□ -0.61
PTPRK-204ENST00000368210 MAS1LP35410 378 aa11.21□□□□□ -0.61
PTPRK-204ENST00000368210 C1orf162Q8NEQ5 155 aaPredicted RBP11.21□□□□□ -0.61
PTPRK-204ENST00000368210 MYOZ3Q8TDC0 251 aa11.21□□□□□ -0.61
PTPRK-204ENST00000368210 CEACAM18A8MTB9 384 aa11.21□□□□□ -0.61
PTPRK-204ENST00000368210 PRSS47A8MTI9 375 aa11.21□□□□□ -0.61
PTPRK-204ENST00000368210 C12orf77C9JDV5 145 aa11.21□□□□□ -0.61
PTPRK-204ENST00000368210 PAQR4Q8N4S7 273 aaPredicted RBP11.21□□□□□ -0.61
PTPRK-204ENST00000368210 TMEM171Q8WVE6 324 aa11.21□□□□□ -0.61
PTPRK-204ENST00000368210 ST6GALNAC6Q969X2 333 aa11.21□□□□□ -0.61
PTPRK-204ENST00000368210 WBP1Q96G27 269 aa11.21□□□□□ -0.61
PTPRK-204ENST00000368210 LYZL4Q96KX0 146 aa11.21□□□□□ -0.61
PTPRK-204ENST00000368210 IMMP2LQ96T52 175 aa11.21□□□□□ -0.61
PTPRK-204ENST00000368210 PLSCR2Q9NRY7 297 aa11.21□□□□□ -0.61
PTPRK-204ENST00000368210 NLRC5Q86WI3 1866 aa11.21□□□□□ -0.62
PTPRK-204ENST00000368210 IGHV1-69-2A0A0G2JMI3 117 aa11.21□□□□□ -0.62
PTPRK-204ENST00000368210 TMEM238C9JI98 176 aa11.21□□□□□ -0.62
PTPRK-204ENST00000368210 SMIM17P0DL12 118 aa11.21□□□□□ -0.62
PTPRK-204ENST00000368210 MPZP25189 248 aa11.21□□□□□ -0.62
PTPRK-204ENST00000368210 ZFAND6Q6FIF0 208 aa11.21□□□□□ -0.62
PTPRK-204ENST00000368210 PSG1P11464 419 aa11.2□□□□□ -0.62
PTPRK-204ENST00000368210 UCP1P25874 307 aa11.2□□□□□ -0.62
PTPRK-204ENST00000368210 FAM222BQ8WU58 562 aa11.2□□□□□ -0.62
PTPRK-204ENST00000368210 CHODLQ9H9P2 273 aa11.2□□□□□ -0.62
PTPRK-204ENST00000368210 F11RQ9Y624 299 aaKnown RBP11.2□□□□□ -0.62
PTPRK-204ENST00000368210 TSPAN13O95857 204 aa11.2□□□□□ -0.62
PTPRK-204ENST00000368210 IGHV1-2P23083 117 aa11.2□□□□□ -0.62
PTPRK-204ENST00000368210 MIC13Q5XKP0 118 aa11.2□□□□□ -0.62
PTPRK-204ENST00000368210 ACP7Q6ZNF0 438 aa11.2□□□□□ -0.62
PTPRK-204ENST00000368210 NEUROG1Q92886 237 aa11.2□□□□□ -0.62
PTPRK-204ENST00000368210 COL4A6Q14031 1691 aa11.2□□□□□ -0.62
PTPRK-204ENST00000368210 CLDND2Q8NHS1 167 aa11.2□□□□□ -0.62
PTPRK-204ENST00000368210 PAXXQ9BUH6 204 aa11.2□□□□□ -0.62
PTPRK-204ENST00000368210 ST20Q9HBF5 79 aa11.2□□□□□ -0.62
PTPRK-204ENST00000368210 TCF19Q9Y242 345 aa11.2□□□□□ -0.62
PTPRK-204ENST00000368210 RNF115Q9Y4L5 304 aa11.2□□□□□ -0.62
PTPRK-204ENST00000368210 C1QTNF9BB2RNN3 333 aa11.2□□□□□ -0.62
PTPRK-204ENST00000368210 HYPMO75409 117 aa11.2□□□□□ -0.62
PTPRK-204ENST00000368210 IGHV2-5P01817 119 aa11.2□□□□□ -0.62
PTPRK-204ENST00000368210 FAM27E3Q08E93 113 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms