RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 SSX9Q7RTT3 188 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 NR2C2APQ86WQ0 139 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 CBR4Q8N4T8 237 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 OR52I1Q8NGK6 324 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 EEF1AKMT3Q96AZ1 226 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 NEDD4LQ96PU5 975 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 RNF2Q99496 336 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 C9orf16Q9BUW7 83 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 C6orf62Q9GZU0 229 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 CHMP1AQ9HD42 196 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 Q9N2K0 584 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 SLC2A9Q9NRM0 540 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 IMPAD1Q9NX62 359 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 UFC1Q9Y3C8 167 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 ORC6Q9Y5N6 252 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 C15orf61A6NNL5 157 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 CENPXA8MT69 81 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 EPM2AB3EWF7 344 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 OGG1O15527 345 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 TSC22D2O75157 780 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 IFNA10P01566 189 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 ZNF735P0CB33 412 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 TRAPPC2P0DI81 140 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 TRAPPC2BP0DI82 140 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 C4BPBP20851 252 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 DUTP33316 252 aaKnown RBP6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 MAP2K4P45985 399 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 AQP4P55087 323 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 POLR2GP62487 172 aaKnown RBP eCLIP6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 RPS27AP62979 156 aaKnown RBP6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 QRFPP83859 136 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 CDK10Q15131 360 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 MOB1BQ7L9L4 216 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 LILRB2Q8N423 598 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 FAM24BQ8N5W8 94 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 PACRGLQ8N7B6 248 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 ZFP41Q8N8Y5 198 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 PGLYRP3Q96LB9 341 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 FYTTD1Q96QD9 318 aaKnown RBP6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 NDUFAF3Q9BU61 184 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 ETV7Q9Y603 341 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 AGRNO00468 2067 aa6.06□□□□□ -1.44
HMGB1P39-201ENST00000366304 IGKV3-7A0A075B6H7 116 aa6.05□□□□□ -1.44
HMGB1P39-201ENST00000366304 IGHV3-49A0A0A0MS15 119 aa6.05□□□□□ -1.44
HMGB1P39-201ENST00000366304 FOXI3A8MTJ6 420 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P39-201ENST00000366304 ZNF705EA8MWA4 302 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P39-201ENST00000366304 SOCS1O15524 211 aa6.05□□□□□ -1.44
HMGB1P39-201ENST00000366304 TALDO1P37837 337 aa6.05□□□□□ -1.44
HMGB1P39-201ENST00000366304 RTL8BQ17RB0 113 aa6.05□□□□□ -1.44
HMGB1P39-201ENST00000366304 Q499Y3 187 aa6.05□□□□□ -1.44
HMGB1P39-201ENST00000366304 IGSF11Q5DX21 431 aa6.05□□□□□ -1.44
HMGB1P39-201ENST00000366304 SOHLH1Q5JUK2 328 aa6.05□□□□□ -1.44
HMGB1P39-201ENST00000366304 LCE1DQ5T752 114 aa6.05□□□□□ -1.44
HMGB1P39-201ENST00000366304 LEMD1Q68G75 181 aa6.05□□□□□ -1.44
HMGB1P39-201ENST00000366304 SPATA12Q7Z6I5 190 aa6.05□□□□□ -1.44
HMGB1P39-201ENST00000366304 GBGT1Q8N5D6 347 aa6.05□□□□□ -1.44
HMGB1P39-201ENST00000366304 RAB2BQ8WUD1 216 aa6.05□□□□□ -1.44
HMGB1P39-201ENST00000366304 SLC29A1Q99808 456 aa6.05□□□□□ -1.44
HMGB1P39-201ENST00000366304 DAZ1Q9NQZ3 744 aaKnown RBP6.05□□□□□ -1.44
HMGB1P39-201ENST00000366304 NACAE9PAV3 2078 aa6.05□□□□□ -1.44
HMGB1P39-201ENST00000366304 TRBV7-1A0A0A6YYK4 115 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 TGOLN2O43493 480 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 GATCO43716 136 aaKnown RBP6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 RPL27AP46776 148 aaKnown RBP6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 TMEM50BP56557 158 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 BRWD1-AS2P59051 145 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 RPL30P62888 115 aaKnown RBP6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 INSL4Q14641 139 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 ZIK1Q3SY52 487 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 OR2B11Q5JQS5 317 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 MEDAGQ5VYS4 303 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 FAM90A2PQ658T7 463 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 GLT8D1Q68CQ7 371 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 LAMTOR1Q6IAA8 161 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 PLET1Q6UQ28 207 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 SLC25A42Q86VD7 318 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 CDH26Q8IXH8 852 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 MMD2Q8IY49 270 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 LINC00518Q8N0U6 118 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 CSNK1G2-AS1Q8NCQ2 148 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 OR6M1Q8NGM8 313 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 GGHQ92820 318 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 SMIM19Q96E16 107 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 DERL3Q96Q80 235 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 TM2D1Q9BX74 207 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 CLEC5AQ9NY25 188 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 SMPXQ9UHP9 88 aa6.04□□□□□ -1.44
HMGB1P39-201ENST00000366304 IGHV3OR16-13A0A075B7E8 117 aa6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 IGHV3-74A0A0B4J1X5 117 aa6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 EFCAB10A6NFE3 127 aa6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 OR2T8A6NH00 312 aa6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 TRDCB7Z8K6 153 aa6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 RAB27BO00194 218 aa6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 CHEK1O14757 476 aa6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 ACTL6BO94805 426 aa6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 SNAPINO95295 136 aa6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 MIFP14174 115 aa6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 RELQ04864 619 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P39-201ENST00000366304 IRF3Q14653 427 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms