RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 RBMY1BA6NDE4 496 aaKnown RBP3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 RBMY1EA6NEQ0 496 aaKnown RBP3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 MSGN1A6NI15 193 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 SRRM4A7MD48 611 aaKnown RBP3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 FOXI3A8MTJ6 420 aaPredicted RBP3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 TRDCB7Z8K6 153 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 PTGES3LE9PB15 166 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 CIDEAO60543 219 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 TPPPO94811 219 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 OR2A4O95047 310 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 BRI3O95415 125 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 SCGB1D1O95968 90 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 UCHL1P09936 223 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 OR9G9P0C7N8 305 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 RBMY1DP0C7P1 496 aaKnown RBP3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 TMEM50BP56557 158 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 RHOGP84095 191 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 PLA2G7Q13093 441 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 EXOSC2Q13868 293 aaKnown RBP3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 MED22Q15528 200 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 TNXAQ16473 311 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 GUCA2BQ16661 112 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 IGSF11Q5DX21 431 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 C10orf55Q5SWW7 151 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 LINC00322Q6ZN03 302 aaPredicted RBP3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 IDO2Q6ZQW0 420 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 TRPT1Q86TN4 253 aaKnown RBP3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 GBGT1Q8N5D6 347 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 FAM89BQ8N5H3 189 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 MS4A15Q8N5U1 240 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 DEFB125Q8N687 156 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 ADAD2Q8NCV1 583 aaKnown RBP3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 DYNLRB2Q8TF09 96 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 ACOT12Q8WYK0 555 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 MAFIPQ8WZ33 124 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 USMG5Q96IX5 58 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 GFI1Q99684 422 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 LITAFQ99732 161 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 SRD5A3Q9H8P0 318 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 SDHAF2Q9NX18 166 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 MGAT4AQ9UM21 535 aa3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 AK6Q9Y3D8 172 aaKnown RBP3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 RBM7Q9Y580 266 aaKnown RBP3.87□□□□□ -1.79
RNU4-4P-201ENST00000364588 A0A075B6Q4 140 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 OR11H12B2RN74 326 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 PPP5D1E7EU14 171 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 J3QRK9 145 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 SLC17A2O00624 439 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 FABP7O15540 132 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 DENRO43583 198 aaKnown RBP3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 OR2J3O76001 311 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 CRYZL1O95825 349 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 IGHV3-23P01764 117 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 HLA-AP01891 365 aaKnown RBP3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 CDK1P06493 297 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 FCGR3AP08637 254 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 GSTT2P0CG29 244 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 GSTT2BP0CG30 244 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 CD37P11049 281 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 SERPINB10P48595 397 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 RPS25P62851 125 aaKnown RBP3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 MRPS15P82914 257 aaKnown RBP3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 ZNF45Q02386 682 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 ATP5G2Q06055 141 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 CBX3Q13185 183 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 SPHARQ15513 63 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 RAB11BQ15907 218 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 PRSS8Q16651 343 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 RTL8BQ17RB0 113 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 DEFB114Q30KQ6 69 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 C2orf76Q3KRA6 126 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 VMA21Q3ZAQ7 101 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 LIPKQ5VXJ0 399 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 RNLSQ5VYX0 342 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 TMEM91Q6ZNR0 172 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 C19orf35Q6ZS72 473 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 PACRGLQ8N7B6 248 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 OR4A4PQ8NGN8 299 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 OR10J5Q8NHC4 309 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 SRSF12Q8WXF0 261 aaKnown RBP3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 CACNG8Q8WXS5 425 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 MND1Q9BWT6 205 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 PLCXD1Q9NUJ7 323 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 FKBP14Q9NWM8 211 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 SLC2A8Q9NY64 477 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 SIGLEC8Q9NYZ4 499 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 ZNF230Q9UIE0 474 aaPredicted RBP3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 KCNK7Q9Y2U2 307 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 LSM2Q9Y333 95 aaKnown RBP3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 S4R3C0 116 aa3.86□□□□□ -1.79
RNU4-4P-201ENST00000364588 TRBV6-7A0A0A0MS04 114 aa3.85□□□□□ -1.79
RNU4-4P-201ENST00000364588 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.85□□□□□ -1.79
RNU4-4P-201ENST00000364588 C2orf70A6NJV1 201 aa3.85□□□□□ -1.79
RNU4-4P-201ENST00000364588 FAM223BA6NKX1 122 aa3.85□□□□□ -1.79
RNU4-4P-201ENST00000364588 AIREO43918 545 aa3.85□□□□□ -1.79
RNU4-4P-201ENST00000364588 OR2C1O95371 312 aa3.85□□□□□ -1.79
RNU4-4P-201ENST00000364588 HSMCR30P0CW71 290 aa3.85□□□□□ -1.79
RNU4-4P-201ENST00000364588 SAA1P0DJI8 122 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms