RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 ZFP69Q49AA0 526 aa16.38■□□□□ 0.21
SHISA4-201ENST00000362011 TMEM86BQ8N661 226 aa16.38■□□□□ 0.21
SHISA4-201ENST00000362011 HINT2Q9BX68 163 aa16.38■□□□□ 0.21
SHISA4-201ENST00000362011 TNFRSF19Q9NS68 423 aa16.38■□□□□ 0.21
SHISA4-201ENST00000362011 MBD2Q9UBB5 411 aa16.38■□□□□ 0.21
SHISA4-201ENST00000362011 H0YIZ8 118 aa16.37■□□□□ 0.21
SHISA4-201ENST00000362011 L7N2F9 121 aa16.37■□□□□ 0.21
SHISA4-201ENST00000362011 HAX1O00165 279 aa16.37■□□□□ 0.21
SHISA4-201ENST00000362011 OPN1MWP04001 364 aa16.37■□□□□ 0.21
SHISA4-201ENST00000362011 OPN1MW2P0DN77 364 aa16.37■□□□□ 0.21
SHISA4-201ENST00000362011 OPN1MW3P0DN78 364 aa16.37■□□□□ 0.21
SHISA4-201ENST00000362011 IAPPP10997 89 aa16.37■□□□□ 0.21
SHISA4-201ENST00000362011 SLC25A4P12235 298 aa16.37■□□□□ 0.21
SHISA4-201ENST00000362011 HOXA1P49639 335 aaPredicted RBP16.37■□□□□ 0.21
SHISA4-201ENST00000362011 COMPP49747 757 aaPredicted RBP16.37■□□□□ 0.21
SHISA4-201ENST00000362011 VAMP2P63027 116 aa16.37■□□□□ 0.21
SHISA4-201ENST00000362011 SPINK9Q5DT21 86 aa16.37■□□□□ 0.21
SHISA4-201ENST00000362011 C10orf55Q5SWW7 151 aa16.37■□□□□ 0.21
SHISA4-201ENST00000362011 PPP1R14BQ96C90 147 aa16.37■□□□□ 0.21
SHISA4-201ENST00000362011 RAB40CQ96S21 281 aa16.37■□□□□ 0.21
SHISA4-201ENST00000362011 RNF126Q9BV68 326 aa16.37■□□□□ 0.21
SHISA4-201ENST00000362011 ENY2Q9NPA8 101 aa16.37■□□□□ 0.21
SHISA4-201ENST00000362011 OR5AC2Q9NZP5 309 aa16.37■□□□□ 0.21
SHISA4-201ENST00000362011 FXYD6-FXYD2A0A087WZ82 144 aa16.36■□□□□ 0.21
SHISA4-201ENST00000362011 CHST1O43916 411 aa16.36■□□□□ 0.21
SHISA4-201ENST00000362011 CNIH1O95406 144 aa16.36■□□□□ 0.21
SHISA4-201ENST00000362011 LYL1P12980 280 aa16.36■□□□□ 0.21
SHISA4-201ENST00000362011 DTD1Q8TEA8 209 aa16.36■□□□□ 0.21
SHISA4-201ENST00000362011 PLEKHA3Q9HB20 300 aa16.36■□□□□ 0.21
SHISA4-201ENST00000362011 NDUFA4L2Q9NRX3 87 aa16.36■□□□□ 0.21
SHISA4-201ENST00000362011 A0A1W2PN81 502 aa16.35■□□□□ 0.21
SHISA4-201ENST00000362011 E5RGE8 158 aa16.35■□□□□ 0.21
SHISA4-201ENST00000362011 CHRNA7P36544 502 aa16.35■□□□□ 0.21
SHISA4-201ENST00000362011 SSBP2P81877 361 aaPredicted RBP16.35■□□□□ 0.21
SHISA4-201ENST00000362011 FXYD3Q14802 87 aa16.35■□□□□ 0.21
SHISA4-201ENST00000362011 ZNF562Q6V9R5 426 aa16.35■□□□□ 0.21
SHISA4-201ENST00000362011 SRSF12Q8WXF0 261 aaKnown RBP16.35■□□□□ 0.21
SHISA4-201ENST00000362011 DCUN1D4Q92564 292 aa16.35■□□□□ 0.21
SHISA4-201ENST00000362011 CIB3Q96Q77 187 aaPredicted RBP16.35■□□□□ 0.21
SHISA4-201ENST00000362011 C11orf1Q9H5F2 150 aa16.35■□□□□ 0.21
SHISA4-201ENST00000362011 CGB1A6NKQ9 187 aa16.34■□□□□ 0.21
SHISA4-201ENST00000362011 GPR137BO60478 399 aa16.34■□□□□ 0.21
SHISA4-201ENST00000362011 LY86O95711 162 aa16.34■□□□□ 0.21
SHISA4-201ENST00000362011 AMY1AP04745 511 aa16.34■□□□□ 0.21
SHISA4-201ENST00000362011 RPL23AP62750 156 aaKnown RBP16.34■□□□□ 0.21
SHISA4-201ENST00000362011 CX3CL1P78423 397 aa16.34■□□□□ 0.21
SHISA4-201ENST00000362011 NOXA1Q86UR1 476 aa16.34■□□□□ 0.21
SHISA4-201ENST00000362011 MRPL41Q8IXM3 137 aaKnown RBP16.34■□□□□ 0.21
SHISA4-201ENST00000362011 ZNF418Q8TF45 676 aaPredicted RBP16.34■□□□□ 0.21
SHISA4-201ENST00000362011 ARPC1AQ92747 370 aa16.34■□□□□ 0.21
SHISA4-201ENST00000362011 SMIM8Q96KF7 97 aa16.34■□□□□ 0.21
SHISA4-201ENST00000362011 HYLS1Q96M11 299 aa16.34■□□□□ 0.21
SHISA4-201ENST00000362011 HIPK2Q9H2X6 1198 aa16.34■□□□□ 0.21
SHISA4-201ENST00000362011 HEYLQ9NQ87 328 aaPredicted RBP16.34■□□□□ 0.21
SHISA4-201ENST00000362011 IGHV7-81A0A0B4J1V7 117 aa16.33■□□□□ 0.2
SHISA4-201ENST00000362011 E7EUB6 86 aa16.33■□□□□ 0.2
SHISA4-201ENST00000362011 BOLA2-SMG1P6H3BVE0 249 aa16.33■□□□□ 0.2
SHISA4-201ENST00000362011 HNRNPCP07910 306 aaKnown RBP eCLIP16.33■□□□□ 0.2
SHISA4-201ENST00000362011 VDAC2P45880 294 aaPredicted RBP16.33■□□□□ 0.2
SHISA4-201ENST00000362011 TAS2R30P59541 319 aa16.33■□□□□ 0.2
SHISA4-201ENST00000362011 OR11H4Q8NGC9 324 aa16.33■□□□□ 0.2
SHISA4-201ENST00000362011 HSPB9Q9BQS6 159 aa16.33■□□□□ 0.2
SHISA4-201ENST00000362011 PSENENQ9NZ42 101 aa16.33■□□□□ 0.2
SHISA4-201ENST00000362011 WSB1Q9Y6I7 421 aa16.33■□□□□ 0.2
SHISA4-201ENST00000362011 DNAJC9-AS1A6NH13 148 aa16.32■□□□□ 0.2
SHISA4-201ENST00000362011 SH2D7A6NKC9 451 aaPredicted RBP16.32■□□□□ 0.2
SHISA4-201ENST00000362011 P2RY1P47900 373 aa16.32■□□□□ 0.2
SHISA4-201ENST00000362011 PAX9P55771 341 aa16.32■□□□□ 0.2
SHISA4-201ENST00000362011 ZNF546Q86UE3 836 aa16.32■□□□□ 0.2
SHISA4-201ENST00000362011 OR10W1Q8NGF6 305 aa16.32■□□□□ 0.2
SHISA4-201ENST00000362011 GRPEL2Q8TAA5 225 aa16.32■□□□□ 0.2
SHISA4-201ENST00000362011 ABHD5Q8WTS1 349 aa16.32■□□□□ 0.2
SHISA4-201ENST00000362011 SRSF8Q9BRL6 282 aaKnown RBP16.32■□□□□ 0.2
SHISA4-201ENST00000362011 A0A1B0GW64 132 aa16.31■□□□□ 0.2
SHISA4-201ENST00000362011 HMSDA8MTL9 139 aa16.31■□□□□ 0.2
SHISA4-201ENST00000362011 INS-IGF2F8WCM5 200 aa16.31■□□□□ 0.2
SHISA4-201ENST00000362011 TSC22D2O75157 780 aa16.31■□□□□ 0.2
SHISA4-201ENST00000362011 NUP62P37198 522 aaPredicted RBP16.31■□□□□ 0.2
SHISA4-201ENST00000362011 ERHP84090 104 aaKnown RBP16.31■□□□□ 0.2
SHISA4-201ENST00000362011 C9orf152Q5JTZ5 239 aa16.31■□□□□ 0.2
SHISA4-201ENST00000362011 TMEM65Q6PI78 240 aa16.31■□□□□ 0.2
SHISA4-201ENST00000362011 DUX5Q96PT3 197 aa16.31■□□□□ 0.2
SHISA4-201ENST00000362011 TEX22C9J3V5 150 aa16.3■□□□□ 0.2
SHISA4-201ENST00000362011 TMEM50AO95807 157 aa16.3■□□□□ 0.2
SHISA4-201ENST00000362011 NDPQ00604 133 aa16.3■□□□□ 0.2
SHISA4-201ENST00000362011 HSD17B13Q7Z5P4 300 aaPredicted RBP16.3■□□□□ 0.2
SHISA4-201ENST00000362011 OR2C3Q8N628 320 aa16.3■□□□□ 0.2
SHISA4-201ENST00000362011 PARP11Q9NR21 331 aa16.3■□□□□ 0.2
SHISA4-201ENST00000362011 LYRM2Q9NU23 88 aaPredicted RBP16.3■□□□□ 0.2
SHISA4-201ENST00000362011 TNFSF18Q9UNG2 199 aa16.3■□□□□ 0.2
SHISA4-201ENST00000362011 IGLC7A0M8Q6 106 aa16.29■□□□□ 0.2
SHISA4-201ENST00000362011 MSGN1A6NI15 193 aa16.29■□□□□ 0.2
SHISA4-201ENST00000362011 H3BP45 60 aa16.29■□□□□ 0.2
SHISA4-201ENST00000362011 ARPC5O15511 151 aa16.29■□□□□ 0.2
SHISA4-201ENST00000362011 KCNAB3O43448 404 aa16.29■□□□□ 0.2
SHISA4-201ENST00000362011 CAV2P51636 162 aa16.29■□□□□ 0.2
SHISA4-201ENST00000362011 RPP30P78346 268 aaKnown RBP16.29■□□□□ 0.2
SHISA4-201ENST00000362011 SPANXN5Q5MJ07 72 aa16.29■□□□□ 0.2
SHISA4-201ENST00000362011 FAM103A1Q9BTL3 118 aaKnown RBP16.29■□□□□ 0.2
SHISA4-201ENST00000362011 STRAPQ9Y3F4 350 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms