RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 GGTLC1Q9BX51 225 aa15.78■□□□□ 0.12
CMTM3-201ENST00000361909 YTHDF2Q9Y5A9 579 aaKnown RBP15.78■□□□□ 0.12
CMTM3-201ENST00000361909 ZFHX4Q86UP3 3567 aa15.78■□□□□ 0.12
CMTM3-201ENST00000361909 TMEM30CPA0ZSE6 113 aa15.77■□□□□ 0.12
CMTM3-201ENST00000361909 TNFSF4P23510 183 aa15.77■□□□□ 0.12
CMTM3-201ENST00000361909 ERVK11-1P61568 191 aa15.77■□□□□ 0.12
CMTM3-201ENST00000361909 ZNF146Q15072 292 aa15.77■□□□□ 0.12
CMTM3-201ENST00000361909 TREML4Q6UXN2 200 aa15.77■□□□□ 0.12
CMTM3-201ENST00000361909 NIT1Q86X76 327 aa15.77■□□□□ 0.12
CMTM3-201ENST00000361909 ST6GALNAC3Q8NDV1 305 aa15.77■□□□□ 0.12
CMTM3-201ENST00000361909 TUBG2Q9NRH3 451 aa15.77■□□□□ 0.12
CMTM3-201ENST00000361909 DCHS1Q96JQ0 3298 aa15.77■□□□□ 0.12
CMTM3-201ENST00000361909 SH2D1BO14796 132 aa15.77■□□□□ 0.11
CMTM3-201ENST00000361909 PMCHP20382 165 aa15.77■□□□□ 0.11
CMTM3-201ENST00000361909 HNF1AP20823 631 aa15.77■□□□□ 0.11
CMTM3-201ENST00000361909 ZNF83P51522 516 aa15.77■□□□□ 0.11
CMTM3-201ENST00000361909 PLP2Q04941 152 aa15.77■□□□□ 0.11
CMTM3-201ENST00000361909 RASL11AQ6T310 242 aa15.77■□□□□ 0.11
CMTM3-201ENST00000361909 RBMXL3Q8N7X1 1067 aaKnown RBP15.77■□□□□ 0.11
CMTM3-201ENST00000361909 OR52E5Q8NH55 327 aa15.77■□□□□ 0.11
CMTM3-201ENST00000361909 LOC400499M0QZD8 3231 aa15.77■□□□□ 0.11
CMTM3-201ENST00000361909 TRAV30A0A087WSZ9 112 aa15.76■□□□□ 0.11
CMTM3-201ENST00000361909 C17orf98A8MV24 154 aa15.76■□□□□ 0.11
CMTM3-201ENST00000361909 FBLN7Q53RD9 439 aa15.76■□□□□ 0.11
CMTM3-201ENST00000361909 NINJ1Q92982 152 aa15.76■□□□□ 0.11
CMTM3-201ENST00000361909 MGST2Q99735 147 aa15.76■□□□□ 0.11
CMTM3-201ENST00000361909 ARHGAP21Q5T5U3 1957 aa15.76■□□□□ 0.11
CMTM3-201ENST00000361909 GNG4P50150 75 aa15.76■□□□□ 0.11
CMTM3-201ENST00000361909 CLCF1Q9UBD9 225 aa15.76■□□□□ 0.11
CMTM3-201ENST00000361909 OOEPA6NGQ2 149 aa15.75■□□□□ 0.11
CMTM3-201ENST00000361909 RHBDL1O75783 438 aa15.75■□□□□ 0.11
CMTM3-201ENST00000361909 CA2P00918 260 aa15.75■□□□□ 0.11
CMTM3-201ENST00000361909 GCNT2Q8N0V5 402 aa15.75■□□□□ 0.11
CMTM3-201ENST00000361909 FAM216AQ8WUB2 273 aa15.75■□□□□ 0.11
CMTM3-201ENST00000361909 C5orf30Q96GV9 206 aa15.75■□□□□ 0.11
CMTM3-201ENST00000361909 SLC25A10Q9UBX3 287 aaPredicted RBP15.75■□□□□ 0.11
CMTM3-201ENST00000361909 LOC105371242A0A075B767 164 aa15.75■□□□□ 0.11
CMTM3-201ENST00000361909 RRHO14718 337 aa15.75■□□□□ 0.11
CMTM3-201ENST00000361909 BRWD1-AS2P59051 145 aa15.75■□□□□ 0.11
CMTM3-201ENST00000361909 SMIM15Q7Z3B0 74 aa15.75■□□□□ 0.11
CMTM3-201ENST00000361909 OR4C5Q8NGB2 326 aa15.75■□□□□ 0.11
CMTM3-201ENST00000361909 TRAV9-2A0A087WT02 112 aa15.74■□□□□ 0.11
CMTM3-201ENST00000361909 AHRRA9YTQ3 701 aa15.74■□□□□ 0.11
CMTM3-201ENST00000361909 PRSS46E5RG02 174 aa15.74■□□□□ 0.11
CMTM3-201ENST00000361909 ISLRO14498 428 aa15.74■□□□□ 0.11
CMTM3-201ENST00000361909 NGFP01138 241 aa15.74■□□□□ 0.11
CMTM3-201ENST00000361909 UCNP55089 124 aa15.74■□□□□ 0.11
CMTM3-201ENST00000361909 SELENOVP59797 346 aa15.74■□□□□ 0.11
CMTM3-201ENST00000361909 GTF3C1Q12789 2109 aa15.74■□□□□ 0.11
CMTM3-201ENST00000361909 LYG1Q8N1E2 194 aa15.74■□□□□ 0.11
CMTM3-201ENST00000361909 TMEM167BQ9NRX6 74 aa15.74■□□□□ 0.11
CMTM3-201ENST00000361909 LSM4Q9Y4Z0 139 aaKnown RBP15.74■□□□□ 0.11
CMTM3-201ENST00000361909 IGLC7A0M8Q6 106 aa15.73■□□□□ 0.11
CMTM3-201ENST00000361909 J3QW42 95 aa15.73■□□□□ 0.11
CMTM3-201ENST00000361909 CCL2P13500 99 aa15.73■□□□□ 0.11
CMTM3-201ENST00000361909 RPS16P62249 146 aaKnown RBP15.73■□□□□ 0.11
CMTM3-201ENST00000361909 SLC35E4Q6ICL7 350 aa15.73■□□□□ 0.11
CMTM3-201ENST00000361909 MUC15Q8N387 334 aa15.73■□□□□ 0.11
CMTM3-201ENST00000361909 TSKUQ8WUA8 353 aa15.73■□□□□ 0.11
CMTM3-201ENST00000361909 RCHY1Q96PM5 261 aa15.73■□□□□ 0.11
CMTM3-201ENST00000361909 BMPR1BO00238 502 aa15.73■□□□□ 0.11
CMTM3-201ENST00000361909 SRIP30626 198 aa15.73■□□□□ 0.11
CMTM3-201ENST00000361909 RAB31Q13636 194 aa15.73■□□□□ 0.11
CMTM3-201ENST00000361909 MIC13Q5XKP0 118 aa15.73■□□□□ 0.11
CMTM3-201ENST00000361909 ZNF808Q8N4W9 903 aaPredicted RBP15.73■□□□□ 0.11
CMTM3-201ENST00000361909 SCCPDHQ8NBX0 429 aa15.73■□□□□ 0.11
CMTM3-201ENST00000361909 ZNF439Q8NDP4 499 aa15.73■□□□□ 0.11
CMTM3-201ENST00000361909 SLC24A4Q8NFF2 622 aa15.73■□□□□ 0.11
CMTM3-201ENST00000361909 WIPF2Q8TF74 440 aaPredicted RBP15.73■□□□□ 0.11
CMTM3-201ENST00000361909 HES4Q9HCC6 221 aa15.73■□□□□ 0.11
CMTM3-201ENST00000361909 NPVFQ9HCQ7 196 aa15.73■□□□□ 0.11
CMTM3-201ENST00000361909 PPIAL4AQ9Y536 164 aa15.73■□□□□ 0.11
CMTM3-201ENST00000361909 CFAP47Q6ZTR5 3102 aa15.73■□□□□ 0.11
CMTM3-201ENST00000361909 SPTBN2O15020 2390 aa15.72■□□□□ 0.11
CMTM3-201ENST00000361909 C12orf77C9JDV5 145 aa15.72■□□□□ 0.11
CMTM3-201ENST00000361909 K7EM74 188 aa15.72■□□□□ 0.11
CMTM3-201ENST00000361909 HINT1P49773 126 aaPredicted RBP15.72■□□□□ 0.11
CMTM3-201ENST00000361909 TBR1Q16650 682 aa15.72■□□□□ 0.11
CMTM3-201ENST00000361909 TIGITQ495A1 244 aa15.72■□□□□ 0.11
CMTM3-201ENST00000361909 CENPWQ5EE01 88 aa15.72■□□□□ 0.11
CMTM3-201ENST00000361909 UNQ5815/PRO19632Q6UWF5 114 aa15.72■□□□□ 0.11
CMTM3-201ENST00000361909 ABHD17AQ96GS6 310 aa15.72■□□□□ 0.11
CMTM3-201ENST00000361909 MS4A5Q9H3V2 200 aa15.72■□□□□ 0.11
CMTM3-201ENST00000361909 IL19Q9UHD0 177 aa15.72■□□□□ 0.11
CMTM3-201ENST00000361909 APC2O95996 2303 aa15.72■□□□□ 0.11
CMTM3-201ENST00000361909 SMIM27A0A1W2PRY6 76 aa15.72■□□□□ 0.11
CMTM3-201ENST00000361909 IGHV3-9P01782 118 aa15.72■□□□□ 0.11
CMTM3-201ENST00000361909 LINC00869P0C866 280 aa15.72■□□□□ 0.11
CMTM3-201ENST00000361909 RHOGP84095 191 aa15.72■□□□□ 0.11
CMTM3-201ENST00000361909 EFNB3Q15768 340 aa15.72■□□□□ 0.11
CMTM3-201ENST00000361909 RTL8BQ17RB0 113 aa15.72■□□□□ 0.11
CMTM3-201ENST00000361909 UBALD1Q8TB05 177 aa15.72■□□□□ 0.11
CMTM3-201ENST00000361909 COMMD5Q9GZQ3 224 aa15.72■□□□□ 0.11
CMTM3-201ENST00000361909 FRYQ5TBA9 3013 aa15.71■□□□□ 0.11
CMTM3-201ENST00000361909 A0A096LPE4 126 aa15.71■□□□□ 0.11
CMTM3-201ENST00000361909 A0A1W2PPZ6 126 aa15.71■□□□□ 0.11
CMTM3-201ENST00000361909 HELTA6NFD8 242 aa15.71■□□□□ 0.11
CMTM3-201ENST00000361909 CA6P23280 308 aa15.71■□□□□ 0.11
CMTM3-201ENST00000361909 LRRC10Q5BKY1 277 aa15.71■□□□□ 0.11
CMTM3-201ENST00000361909 CORO2AQ92828 525 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms