RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 IGLV3-1P01715 115 aa11.43□□□□□ -0.58
SGMS1-202ENST00000361781 REG1AP05451 166 aa11.43□□□□□ -0.58
SGMS1-202ENST00000361781 CYC1P08574 325 aa11.43□□□□□ -0.58
SGMS1-202ENST00000361781 TIMP3P35625 211 aa11.43□□□□□ -0.58
SGMS1-202ENST00000361781 CLDN18P56856 261 aa11.43□□□□□ -0.58
SGMS1-202ENST00000361781 ASCL4Q6XD76 172 aa11.43□□□□□ -0.58
SGMS1-202ENST00000361781 ZNF114Q8NC26 417 aa11.43□□□□□ -0.58
SGMS1-202ENST00000361781 ADAMTS9Q9P2N4 1935 aa11.43□□□□□ -0.58
SGMS1-202ENST00000361781 LINC00473A8K010 186 aa11.43□□□□□ -0.58
SGMS1-202ENST00000361781 SMPD2O60906 423 aa11.43□□□□□ -0.58
SGMS1-202ENST00000361781 HCP5Q6MZN7 132 aa11.43□□□□□ -0.58
SGMS1-202ENST00000361781 OPN3Q9H1Y3 402 aaPredicted RBP11.43□□□□□ -0.58
SGMS1-202ENST00000361781 HSPB7Q9UBY9 170 aa11.43□□□□□ -0.58
SGMS1-202ENST00000361781 SEPSECSQ9HD40 501 aaKnown RBP11.42□□□□□ -0.58
SGMS1-202ENST00000361781 TIMM9Q9Y5J7 89 aa11.42□□□□□ -0.58
SGMS1-202ENST00000361781 ETV2O00321 342 aaPredicted RBP11.42□□□□□ -0.58
SGMS1-202ENST00000361781 LINC00869P0C866 280 aa11.42□□□□□ -0.58
SGMS1-202ENST00000361781 TMEM14EPQ6UXP3 125 aa11.42□□□□□ -0.58
SGMS1-202ENST00000361781 OR2T6Q8NHC8 308 aa11.42□□□□□ -0.58
SGMS1-202ENST00000361781 SSBP4Q9BWG4 385 aaPredicted RBP11.42□□□□□ -0.58
SGMS1-202ENST00000361781 TMSB15BA0A087X1C1 80 aa11.42□□□□□ -0.58
SGMS1-202ENST00000361781 FOXH1O75593 365 aa11.42□□□□□ -0.58
SGMS1-202ENST00000361781 SUB1P53999 127 aaKnown RBP eCLIP11.42□□□□□ -0.58
SGMS1-202ENST00000361781 KLF3P57682 345 aaPredicted RBP11.42□□□□□ -0.58
SGMS1-202ENST00000361781 TNFAIP6P98066 277 aaPredicted RBP11.42□□□□□ -0.58
SGMS1-202ENST00000361781 HES1Q14469 280 aa11.42□□□□□ -0.58
SGMS1-202ENST00000361781 CRIP3Q6Q6R5 217 aa11.42□□□□□ -0.58
SGMS1-202ENST00000361781 Q6ZPA2 131 aa11.42□□□□□ -0.58
SGMS1-202ENST00000361781 ITLN1Q8WWA0 313 aa11.42□□□□□ -0.58
SGMS1-202ENST00000361781 MRPL37Q9BZE1 423 aaKnown RBP11.42□□□□□ -0.58
SGMS1-202ENST00000361781 CT45A6P0DMU7 189 aa11.41□□□□□ -0.58
SGMS1-202ENST00000361781 CT45A5P0DMU8 189 aa11.41□□□□□ -0.58
SGMS1-202ENST00000361781 CT45A7P0DMV0 189 aa11.41□□□□□ -0.58
SGMS1-202ENST00000361781 COX5BP10606 129 aa11.41□□□□□ -0.58
SGMS1-202ENST00000361781 BPIFB3P59826 476 aa11.41□□□□□ -0.58
SGMS1-202ENST00000361781 CT45A1Q5HYN5 189 aa11.41□□□□□ -0.58
SGMS1-202ENST00000361781 SSX8Q7RTT4 187 aa11.41□□□□□ -0.58
SGMS1-202ENST00000361781 OR1L4Q8NGR5 311 aa11.41□□□□□ -0.58
SGMS1-202ENST00000361781 CT45A3Q8NHU0 189 aa11.41□□□□□ -0.58
SGMS1-202ENST00000361781 SPSB4Q96A44 273 aa11.41□□□□□ -0.58
SGMS1-202ENST00000361781 SCRT1Q9BWW7 348 aa11.41□□□□□ -0.58
SGMS1-202ENST00000361781 SNAI2O43623 268 aa11.41□□□□□ -0.58
SGMS1-202ENST00000361781 MPDU1O75352 247 aa11.41□□□□□ -0.58
SGMS1-202ENST00000361781 RBP4P02753 201 aa11.41□□□□□ -0.58
SGMS1-202ENST00000361781 PRB3Q04118 309 aaPredicted RBP11.41□□□□□ -0.58
SGMS1-202ENST00000361781 FOXF2Q12947 444 aa11.41□□□□□ -0.58
SGMS1-202ENST00000361781 KRTCAP3Q53RY4 240 aa11.41□□□□□ -0.58
SGMS1-202ENST00000361781 LCN12Q6JVE5 192 aa11.41□□□□□ -0.58
SGMS1-202ENST00000361781 VWA1Q6PCB0 445 aa11.41□□□□□ -0.58
SGMS1-202ENST00000361781 FAM214BQ7L5A3 538 aa11.41□□□□□ -0.58
SGMS1-202ENST00000361781 RNF2Q99496 336 aa11.41□□□□□ -0.58
SGMS1-202ENST00000361781 FGF23Q9GZV9 251 aaPredicted RBP11.41□□□□□ -0.58
SGMS1-202ENST00000361781 DPRXA6NFQ7 191 aa11.4□□□□□ -0.58
SGMS1-202ENST00000361781 C1orf210Q8IVY1 113 aa11.4□□□□□ -0.58
SGMS1-202ENST00000361781 NRN1Q9NPD7 142 aa11.4□□□□□ -0.58
SGMS1-202ENST00000361781 CALYQ9NYX4 217 aa11.4□□□□□ -0.58
SGMS1-202ENST00000361781 IL36BQ9NZH7 164 aa11.4□□□□□ -0.58
SGMS1-202ENST00000361781 FREM2Q5SZK8 3169 aa11.4□□□□□ -0.58
SGMS1-202ENST00000361781 NKX6-3A6NJ46 265 aa11.4□□□□□ -0.58
SGMS1-202ENST00000361781 HTR1DP28221 377 aa11.4□□□□□ -0.58
SGMS1-202ENST00000361781 K7ESF4 209 aa11.4□□□□□ -0.58
SGMS1-202ENST00000361781 BMPR1BO00238 502 aa11.4□□□□□ -0.58
SGMS1-202ENST00000361781 NKX2-8O15522 239 aa11.4□□□□□ -0.58
SGMS1-202ENST00000361781 HSPE1P61604 102 aaKnown RBP11.4□□□□□ -0.58
SGMS1-202ENST00000361781 ACP7Q6ZNF0 438 aa11.4□□□□□ -0.58
SGMS1-202ENST00000361781 FOXL2NBQ6ZUU3 175 aa11.4□□□□□ -0.58
SGMS1-202ENST00000361781 PMCHL2Q9BQD1 86 aa11.4□□□□□ -0.58
SGMS1-202ENST00000361781 ZPBPQ9BS86 351 aa11.4□□□□□ -0.58
SGMS1-202ENST00000361781 C2orf88Q9BSF0 95 aa11.4□□□□□ -0.58
SGMS1-202ENST00000361781 LINC00470Q9BZP3 86 aa11.4□□□□□ -0.58
SGMS1-202ENST00000361781 MGST3O14880 152 aa11.39□□□□□ -0.59
SGMS1-202ENST00000361781 CDKN1AP38936 164 aa11.39□□□□□ -0.59
SGMS1-202ENST00000361781 TREML4Q6UXN2 200 aa11.39□□□□□ -0.59
SGMS1-202ENST00000361781 OR4B1Q8NGF8 309 aa11.39□□□□□ -0.59
SGMS1-202ENST00000361781 WDR83OSQ9Y284 106 aa11.39□□□□□ -0.59
SGMS1-202ENST00000361781 POLR3KQ9Y2Y1 108 aaPredicted RBP11.39□□□□□ -0.59
SGMS1-202ENST00000361781 ZGRF1Q86YA3 2104 aa11.39□□□□□ -0.59
SGMS1-202ENST00000361781 RBFOX2O43251 390 aaKnown RBP eCLIP11.39□□□□□ -0.597e-7■■■□□ 15.9
SGMS1-202ENST00000361781 LYZP61626 148 aa11.39□□□□□ -0.59
SGMS1-202ENST00000361781 INO80CQ6PI98 192 aaPredicted RBP11.39□□□□□ -0.59
SGMS1-202ENST00000361781 PDPNQ86YL7 162 aa11.39□□□□□ -0.59
SGMS1-202ENST00000361781 BCL2L2Q92843 193 aaPredicted RBP11.39□□□□□ -0.59
SGMS1-202ENST00000361781 TMEM45BQ96B21 275 aa11.39□□□□□ -0.59
SGMS1-202ENST00000361781 UQCR10Q9UDW1 63 aa11.39□□□□□ -0.59
SGMS1-202ENST00000361781 TMEM210A6NLX4 147 aa11.39□□□□□ -0.59
SGMS1-202ENST00000361781 MOB3BQ86TA1 216 aa11.39□□□□□ -0.59
SGMS1-202ENST00000361781 OR8B2Q96RD0 313 aa11.39□□□□□ -0.59
SGMS1-202ENST00000361781 MALRD1Q5VYJ5 2156 aa11.38□□□□□ -0.59
SGMS1-202ENST00000361781 IL18BPO95998 194 aa11.38□□□□□ -0.59
SGMS1-202ENST00000361781 GFRA1P56159 465 aa11.38□□□□□ -0.59
SGMS1-202ENST00000361781 MLANAQ16655 118 aa11.38□□□□□ -0.59
SGMS1-202ENST00000361781 ACTL10Q5JWF8 245 aa11.38□□□□□ -0.59
SGMS1-202ENST00000361781 GMPPAQ96IJ6 420 aaPredicted RBP11.38□□□□□ -0.59
SGMS1-202ENST00000361781 PAXXQ9BUH6 204 aa11.38□□□□□ -0.59
SGMS1-202ENST00000361781 COL8A1P27658 744 aa11.38□□□□□ -0.59
SGMS1-202ENST00000361781 S100A7P31151 101 aa11.38□□□□□ -0.59
SGMS1-202ENST00000361781 GABRA6Q16445 453 aa11.38□□□□□ -0.59
SGMS1-202ENST00000361781 PEAR1Q5VY43 1037 aaPredicted RBP11.38□□□□□ -0.59
SGMS1-202ENST00000361781 C10orf113Q5VZT2 155 aa11.38□□□□□ -0.59
SGMS1-202ENST00000361781 SLC35E4Q6ICL7 350 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms