RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 NPBQ8NG41 125 aa18.53■□□□□ 0.56
SDF4-202ENST00000360001 ARV1Q9H2C2 271 aa18.53■□□□□ 0.56
SDF4-202ENST00000360001 PLEKHA3Q9HB20 300 aa18.53■□□□□ 0.56
SDF4-202ENST00000360001 CCDC168Q8NDH2 2452 aa18.53■□□□□ 0.56
SDF4-202ENST00000360001 BORCS7-ASMTA0A0B4J1R7 106 aa18.53■□□□□ 0.56
SDF4-202ENST00000360001 CGB1A6NKQ9 187 aa18.53■□□□□ 0.56
SDF4-202ENST00000360001 NDUFA3O95167 84 aa18.53■□□□□ 0.56
SDF4-202ENST00000360001 EIF5AP63241 154 aaKnown RBP18.53■□□□□ 0.56
SDF4-202ENST00000360001 TMEM170AQ8WVE7 144 aa18.53■□□□□ 0.56
SDF4-202ENST00000360001 ENY2Q9NPA8 101 aa18.53■□□□□ 0.56
SDF4-202ENST00000360001 J3QLI3 93 aa18.52■□□□□ 0.56
SDF4-202ENST00000360001 NBR2O15453 112 aa18.52■□□□□ 0.56
SDF4-202ENST00000360001 IFNA10P01566 189 aa18.52■□□□□ 0.56
SDF4-202ENST00000360001 HBG1P69891 147 aa18.52■□□□□ 0.56
SDF4-202ENST00000360001 HBG2P69892 147 aa18.52■□□□□ 0.56
SDF4-202ENST00000360001 OR8G2PQ6IF36 304 aa18.52■□□□□ 0.56
SDF4-202ENST00000360001 OR10W1Q8NGF6 305 aa18.52■□□□□ 0.56
SDF4-202ENST00000360001 ATP5SQ99766 215 aa18.52■□□□□ 0.56
SDF4-202ENST00000360001 ITGB1BP2Q9UKP3 347 aa18.52■□□□□ 0.56
SDF4-202ENST00000360001 A0A1B0GW64 132 aa18.51■□□□□ 0.55
SDF4-202ENST00000360001 HTR2BP41595 481 aa18.51■□□□□ 0.55
SDF4-202ENST00000360001 ZNF266Q14584 549 aa18.51■□□□□ 0.55
SDF4-202ENST00000360001 FAM120AOSQ5T036 256 aa18.51■□□□□ 0.55
SDF4-202ENST00000360001 ITPR3Q14573 2671 aa18.51■□□□□ 0.55
SDF4-202ENST00000360001 BRS3P32247 399 aa18.51■□□□□ 0.55
SDF4-202ENST00000360001 RPP30P78346 268 aaKnown RBP18.51■□□□□ 0.55
SDF4-202ENST00000360001 SLC38A11Q08AI6 406 aa18.51■□□□□ 0.55
SDF4-202ENST00000360001 MAS1LP35410 378 aa18.5■□□□□ 0.55
SDF4-202ENST00000360001 SSBP2P81877 361 aaPredicted RBP18.5■□□□□ 0.55
SDF4-202ENST00000360001 TMED6Q8WW62 240 aa18.5■□□□□ 0.55
SDF4-202ENST00000360001 A0A0U1RQK1 487 aa18.5■□□□□ 0.55
SDF4-202ENST00000360001 RPS10-NUDT3A0A1W2PQS6 291 aa18.5■□□□□ 0.55
SDF4-202ENST00000360001 INS-IGF2F8WCM5 200 aa18.5■□□□□ 0.55
SDF4-202ENST00000360001 FCN1O00602 326 aa18.5■□□□□ 0.55
SDF4-202ENST00000360001 DFFBO76075 338 aa18.5■□□□□ 0.55
SDF4-202ENST00000360001 FAM106CPP0CH98 169 aa18.5■□□□□ 0.55
SDF4-202ENST00000360001 TNXAQ16473 311 aa18.5■□□□□ 0.55
SDF4-202ENST00000360001 FAM74A1Q5RGS3 127 aa18.5■□□□□ 0.55
SDF4-202ENST00000360001 SLC24A4Q8NFF2 622 aa18.5■□□□□ 0.55
SDF4-202ENST00000360001 FOXC2Q99958 501 aa18.5■□□□□ 0.55
SDF4-202ENST00000360001 GINS3Q9BRX5 216 aa18.5■□□□□ 0.55
SDF4-202ENST00000360001 KIAA1456Q9P272 454 aa18.5■□□□□ 0.55
SDF4-202ENST00000360001 TMEM11P17152 192 aa18.49■□□□□ 0.55
SDF4-202ENST00000360001 COMPP49747 757 aaPredicted RBP18.49■□□□□ 0.55
SDF4-202ENST00000360001 PLGLAQ15195 96 aa18.49■□□□□ 0.55
SDF4-202ENST00000360001 LILRB2Q8N423 598 aa18.49■□□□□ 0.55
SDF4-202ENST00000360001 OR10P1Q8NGE3 313 aa18.49■□□□□ 0.55
SDF4-202ENST00000360001 ACTL6BO94805 426 aa18.48■□□□□ 0.55
SDF4-202ENST00000360001 OR8U8P0C7N1 319 aa18.48■□□□□ 0.55
SDF4-202ENST00000360001 NPY1RP25929 384 aa18.48■□□□□ 0.55
SDF4-202ENST00000360001 C5orf64Q2M2E5 130 aa18.48■□□□□ 0.55
SDF4-202ENST00000360001 BSXQ3C1V8 233 aa18.48■□□□□ 0.55
SDF4-202ENST00000360001 PCNPQ8WW12 178 aaKnown RBP18.48■□□□□ 0.55
SDF4-202ENST00000360001 MEGF9Q9H1U4 602 aa18.48■□□□□ 0.55
SDF4-202ENST00000360001 A0A1W2PN81 502 aa18.48■□□□□ 0.55
SDF4-202ENST00000360001 CA2P00918 260 aa18.48■□□□□ 0.55
SDF4-202ENST00000360001 CHRNA7P36544 502 aa18.48■□□□□ 0.55
SDF4-202ENST00000360001 RPL27AP46776 148 aaKnown RBP18.48■□□□□ 0.55
SDF4-202ENST00000360001 HSD17B11Q8NBQ5 300 aa18.48■□□□□ 0.55
SDF4-202ENST00000360001 SOX21Q9Y651 276 aaPredicted RBP18.48■□□□□ 0.55
SDF4-202ENST00000360001 FBXO24O75426 580 aa18.47■□□□□ 0.55
SDF4-202ENST00000360001 GNB1P62873 340 aa18.47■□□□□ 0.55
SDF4-202ENST00000360001 WT1-ASQ06250 92 aa18.47■□□□□ 0.55
SDF4-202ENST00000360001 ETV3LQ6ZN32 361 aa18.47■□□□□ 0.55
SDF4-202ENST00000360001 CIARTQ8N365 385 aaPredicted RBP18.47■□□□□ 0.55
SDF4-202ENST00000360001 PINX1Q96BK5 328 aaKnown RBP18.47■□□□□ 0.55
SDF4-202ENST00000360001 ZNF469Q96JG9 3925 aaPredicted RBP18.47■□□□□ 0.55
SDF4-202ENST00000360001 ABCA1O95477 2261 aa18.47■□□□□ 0.55
SDF4-202ENST00000360001 PRSS46E5RG02 174 aa18.46■□□□□ 0.55
SDF4-202ENST00000360001 SCAF4O95104 1147 aaKnown RBP18.46■□□□□ 0.55
SDF4-202ENST00000360001 CLLU1Q5K131 121 aa18.46■□□□□ 0.55
SDF4-202ENST00000360001 CSPG4Q6UVK1 2322 aa18.46■□□□□ 0.55
SDF4-202ENST00000360001 NAV3Q8IVL0 2385 aa18.46■□□□□ 0.55
SDF4-202ENST00000360001 RAB11AP62491 216 aa18.46■□□□□ 0.55
SDF4-202ENST00000360001 ATP6V1FQ16864 119 aa18.46■□□□□ 0.55
SDF4-202ENST00000360001 SH3BGRL3Q9H299 93 aa18.46■□□□□ 0.55
SDF4-202ENST00000360001 IGLC7A0M8Q6 106 aa18.45■□□□□ 0.54
SDF4-202ENST00000360001 NCBP2LA6PVI3 153 aaKnown RBP18.45■□□□□ 0.54
SDF4-202ENST00000360001 RNASE2P10153 161 aaKnown RBP18.45■□□□□ 0.54
SDF4-202ENST00000360001 SPP1P10451 314 aa18.45■□□□□ 0.54
SDF4-202ENST00000360001 ERHP84090 104 aaKnown RBP18.45■□□□□ 0.54
SDF4-202ENST00000360001 CYB5R2Q6BCY4 276 aa18.45■□□□□ 0.54
SDF4-202ENST00000360001 EIF5AL1Q6IS14 154 aaKnown RBP18.45■□□□□ 0.54
SDF4-202ENST00000360001 AKAP9Q99996 3911 aa18.45■□□□□ 0.54
SDF4-202ENST00000360001 IFNA5P01569 189 aa18.44■□□□□ 0.54
SDF4-202ENST00000360001 IFNA4P05014 189 aa18.44■□□□□ 0.54
SDF4-202ENST00000360001 NMBP08949 121 aa18.44■□□□□ 0.54
SDF4-202ENST00000360001 ATP6V0CP27449 155 aa18.44■□□□□ 0.54
SDF4-202ENST00000360001 RAB14P61106 215 aa18.44■□□□□ 0.54
SDF4-202ENST00000360001 C2orf83Q53S99 150 aa18.44■□□□□ 0.54
SDF4-202ENST00000360001 PIFOQ8TCI5 191 aa18.44■□□□□ 0.54
SDF4-202ENST00000360001 SRSF12Q8WXF0 261 aaKnown RBP18.44■□□□□ 0.54
SDF4-202ENST00000360001 TMEM147Q9BVK8 224 aa18.44■□□□□ 0.54
SDF4-202ENST00000360001 PLA2G2EQ9NZK7 142 aa18.44■□□□□ 0.54
SDF4-202ENST00000360001 FAM96BQ9Y3D0 163 aa18.44■□□□□ 0.54
SDF4-202ENST00000360001 TEX15Q9BXT5 2789 aa18.44■□□□□ 0.54
SDF4-202ENST00000360001 SEC11BP0C7V7 166 aa18.44■□□□□ 0.54
SDF4-202ENST00000360001 SNCAP37840 140 aa18.44■□□□□ 0.54
SDF4-202ENST00000360001 ATP5IP56385 69 aaPredicted RBP18.44■□□□□ 0.54
SDF4-202ENST00000360001 VWC2Q2TAL6 325 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms