RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 ZNF680Q8NEM1 530 aa11.1□□□□□ -0.63
PDLIM5-203ENST00000359265 OR1S2Q8NGQ3 325 aa11.1□□□□□ -0.63
PDLIM5-203ENST00000359265 OR1L8Q8NGR8 309 aa11.1□□□□□ -0.63
PDLIM5-203ENST00000359265 ZNF430Q9H8G1 570 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-203ENST00000359265 PLEKHA3Q9HB20 300 aa11.1□□□□□ -0.63
PDLIM5-203ENST00000359265 HEYLQ9NQ87 328 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-203ENST00000359265 CYTL1Q9NRR1 136 aa11.1□□□□□ -0.63
PDLIM5-203ENST00000359265 KIAA1456Q9P272 454 aa11.1□□□□□ -0.63
PDLIM5-203ENST00000359265 METTL1Q9UBP6 276 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-203ENST00000359265 UBQLN2Q9UHD9 624 aa11.1□□□□□ -0.63
PDLIM5-203ENST00000359265 ANK2Q01484 3957 aa11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 NBR2O15453 112 aa11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 JTBO76095 146 aa11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 CST7O76096 145 aa11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 CRYGBP07316 175 aa11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 METTL15P1P0C7V9 234 aa11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 MAS1LP35410 378 aa11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 VDAC2P45880 294 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 DYNLT3P51808 116 aa11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 F2RL1P55085 397 aa11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 HBG1P69891 147 aa11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 HBG2P69892 147 aa11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 ZNF266Q14584 549 aa11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 MMDQ15546 238 aa11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 RUSC1-AS1Q66K80 236 aa11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 TMEM14EPQ6UXP3 125 aa11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 STPG2Q8N412 459 aa11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 TEX29Q8N6K0 151 aa11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 C17orf50Q8WW18 174 aa11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 BSCL2Q96G97 398 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 EAF1Q96JC9 268 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 RITA1Q96K30 269 aa11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 HINT2Q9BX68 163 aa11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 PAIP2BQ9ULR5 123 aaKnown RBP11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 SIGLEC9Q9Y336 463 aa11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 TNCP24821 2201 aa11.09□□□□□ -0.63
PDLIM5-203ENST00000359265 IGHV3OR16-10A0A075B7F0 116 aa11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 TEX50A0A1B0GTY4 177 aa11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 A0A1W2PN81 502 aa11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 RRHO14718 337 aa11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 SMAD7O15105 426 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 CRLF1O75462 422 aa11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 DFFBO76075 338 aa11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 ACTL6BO94805 426 aa11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 CFDP00746 253 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 MYOD1P15172 320 aa11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 CNTFRP26992 372 aa11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 CHRNA7P36544 502 aa11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 EBI3Q14213 229 aa11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 PLGLAQ15195 96 aa11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 PRSS8Q16651 343 aa11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 RPL7L1Q6DKI1 246 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 THNSL2Q86YJ6 484 aa11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 MRPL41Q8IXM3 137 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 TMEM217Q8N7C4 229 aa11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 OR5C1Q8NGR4 320 aa11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 SCARB1Q8WTV0 552 aa11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 PHYHIPLQ96FC7 376 aa11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 AJUBAQ96IF1 538 aa11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 OR4C12Q96R67 309 aa11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 TPSG1Q9NRR2 321 aa11.08□□□□□ -0.64
PDLIM5-203ENST00000359265 C15orf62A8K5M9 175 aa11.07□□□□□ -0.64
PDLIM5-203ENST00000359265 NDUFA3O95167 84 aa11.07□□□□□ -0.64
PDLIM5-203ENST00000359265 IFNA10P01566 189 aa11.07□□□□□ -0.64
PDLIM5-203ENST00000359265 OR8U8P0C7N1 319 aa11.07□□□□□ -0.64
PDLIM5-203ENST00000359265 FAM106CPP0CH98 169 aa11.07□□□□□ -0.64
PDLIM5-203ENST00000359265 IGHV4-38-2P0DP08 117 aa11.07□□□□□ -0.64
PDLIM5-203ENST00000359265 TMEM11P17152 192 aa11.07□□□□□ -0.64
PDLIM5-203ENST00000359265 PAX6P26367 422 aa11.07□□□□□ -0.64
PDLIM5-203ENST00000359265 BPIFB3P59826 476 aa11.07□□□□□ -0.64
PDLIM5-203ENST00000359265 RAB11AP62491 216 aa11.07□□□□□ -0.64
PDLIM5-203ENST00000359265 CLINT1Q14677 625 aa11.07□□□□□ -0.64
PDLIM5-203ENST00000359265 TNXAQ16473 311 aa11.07□□□□□ -0.64
PDLIM5-203ENST00000359265 PPP1R27Q86WC6 154 aa11.07□□□□□ -0.64
PDLIM5-203ENST00000359265 BAP18Q8IXM2 172 aa11.07□□□□□ -0.64
PDLIM5-203ENST00000359265 LILRB2Q8N423 598 aa11.07□□□□□ -0.64
PDLIM5-203ENST00000359265 SLC24A4Q8NFF2 622 aa11.07□□□□□ -0.64
PDLIM5-203ENST00000359265 NPBQ8NG41 125 aa11.07□□□□□ -0.64
PDLIM5-203ENST00000359265 ATP5SQ99766 215 aa11.07□□□□□ -0.64
PDLIM5-203ENST00000359265 FBXL15Q9H469 300 aa11.07□□□□□ -0.64
PDLIM5-203ENST00000359265 OPN1MWP04001 364 aa11.06□□□□□ -0.64
PDLIM5-203ENST00000359265 OPN1MW2P0DN77 364 aa11.06□□□□□ -0.64
PDLIM5-203ENST00000359265 OPN1MW3P0DN78 364 aa11.06□□□□□ -0.64
PDLIM5-203ENST00000359265 NPY1RP25929 384 aa11.06□□□□□ -0.64
PDLIM5-203ENST00000359265 RPL27AP46776 148 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-203ENST00000359265 ATP5IP56385 69 aaPredicted RBP11.06□□□□□ -0.64
PDLIM5-203ENST00000359265 SLC38A11Q08AI6 406 aa11.06□□□□□ -0.64
PDLIM5-203ENST00000359265 HNF4GQ14541 408 aa11.06□□□□□ -0.64
PDLIM5-203ENST00000359265 EIF5AL1Q6IS14 154 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-203ENST00000359265 ALKAL2Q6UX46 152 aa11.06□□□□□ -0.64
PDLIM5-203ENST00000359265 BRD3OSQ6XYD6 125 aa11.06□□□□□ -0.64
PDLIM5-203ENST00000359265 HAPLN4Q86UW8 402 aa11.06□□□□□ -0.64
PDLIM5-203ENST00000359265 Q8N6K4 173 aa11.06□□□□□ -0.64
PDLIM5-203ENST00000359265 UBAC2Q8NBM4 344 aa11.06□□□□□ -0.64
PDLIM5-203ENST00000359265 OR10P1Q8NGE3 313 aa11.06□□□□□ -0.64
PDLIM5-203ENST00000359265 TMEM158Q8WZ71 300 aa11.06□□□□□ -0.64
PDLIM5-203ENST00000359265 PINX1Q96BK5 328 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-203ENST00000359265 WFDC1Q9HC57 220 aa11.06□□□□□ -0.64
PDLIM5-203ENST00000359265 NDUFA4L2Q9NRX3 87 aa11.06□□□□□ -0.64
PDLIM5-203ENST00000359265 C1RLQ9NZP8 487 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms