RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 ACTL6BO94805 426 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 MT-CO2P00403 227 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 IGHV1-46P01743 117 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 TIMP3P35625 211 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 C1orf185Q5T7R7 199 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 UNQ6494/PRO21346Q6UXR6 183 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 MRPL41Q8IXM3 137 aaKnown RBP7.05□□□□□ -1.28
RFX3-202ENST00000358730 ZNF439Q8NDP4 499 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 OR4P4Q8NGL7 312 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 FAM122AQ96E09 287 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 DYSFO75923 2080 aa7.04□□□□□ -1.28
RFX3-202ENST00000358730 FOXH1O75593 365 aa7.04□□□□□ -1.28
RFX3-202ENST00000358730 MMP23AO75900 390 aa7.04□□□□□ -1.28
RFX3-202ENST00000358730 RPL29P47914 159 aaKnown RBP7.04□□□□□ -1.28
RFX3-202ENST00000358730 FOXL1Q12952 345 aa7.04□□□□□ -1.28
RFX3-202ENST00000358730 TEX38Q6PEX7 206 aa7.04□□□□□ -1.28
RFX3-202ENST00000358730 OCC1Q8TAD7 63 aa7.04□□□□□ -1.28
RFX3-202ENST00000358730 ZCCHC14Q8WYQ9 949 aaKnown RBP7.04□□□□□ -1.28
RFX3-202ENST00000358730 WFIKKN1Q96NZ8 548 aa7.04□□□□□ -1.28
RFX3-202ENST00000358730 LRFN3Q9BTN0 628 aa7.04□□□□□ -1.28
RFX3-202ENST00000358730 ELOVL5Q9NYP7 299 aa7.04□□□□□ -1.28
RFX3-202ENST00000358730 ZNRD1Q9P1U0 126 aa7.04□□□□□ -1.28
RFX3-202ENST00000358730 IL19Q9UHD0 177 aa7.04□□□□□ -1.28
RFX3-202ENST00000358730 PRNDQ9UKY0 176 aa7.04□□□□□ -1.28
RFX3-202ENST00000358730 J3QR06 171 aa7.04□□□□□ -1.28
RFX3-202ENST00000358730 IGKV1-16P04430 117 aa7.04□□□□□ -1.28
RFX3-202ENST00000358730 TNFSF4P23510 183 aa7.04□□□□□ -1.28
RFX3-202ENST00000358730 RTL8BQ17RB0 113 aa7.04□□□□□ -1.28
RFX3-202ENST00000358730 OR10G8Q8NGN5 311 aa7.04□□□□□ -1.28
RFX3-202ENST00000358730 SNRNP40Q96DI7 357 aaKnown RBP7.04□□□□□ -1.28
RFX3-202ENST00000358730 SLC35D1Q9NTN3 355 aa7.04□□□□□ -1.28
RFX3-202ENST00000358730 DCAF16Q9NXF7 216 aa7.04□□□□□ -1.28
RFX3-202ENST00000358730 MGAQ8IWI9 3026 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 A0A1B0GUS0 222 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 GCGP01275 180 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 IRF2P14316 349 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 PRR20EP86478 221 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 PRR20CP86479 221 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 PRR20DP86480 221 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 PRR20BP86481 221 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 PRR20AP86496 221 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 POU2AF1Q16633 256 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 C3orf36Q3SXR2 165 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 MIR17HGQ75NE6 70 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 GBGT1Q8N5D6 347 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 CORO2AQ92828 525 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 NEUROG1Q92886 237 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 UHRF2Q96PU4 802 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 CUL9Q8IWT3 2517 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 NDUFB7P17568 137 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 PRCDQ00LT1 54 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 FAM27E3Q08E93 113 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 ZNF788Q6ZQV5 615 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 REC114Q7Z4M0 266 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 MOB3BQ86TA1 216 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 RND1Q92730 232 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 SFXN3Q9BWM7 321 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 CHODLQ9H9P2 273 aa7.03□□□□□ -1.28
RFX3-202ENST00000358730 K7EN84 100 aa7.02□□□□□ -1.28
RFX3-202ENST00000358730 UPK2O00526 184 aa7.02□□□□□ -1.28
RFX3-202ENST00000358730 CT45A6P0DMU7 189 aa7.02□□□□□ -1.28
RFX3-202ENST00000358730 CT45A5P0DMU8 189 aa7.02□□□□□ -1.28
RFX3-202ENST00000358730 CT45A7P0DMV0 189 aa7.02□□□□□ -1.28
RFX3-202ENST00000358730 CCKARP32238 428 aa7.02□□□□□ -1.28
RFX3-202ENST00000358730 ZNF90Q03938 601 aa7.02□□□□□ -1.28
RFX3-202ENST00000358730 PSG5Q15238 335 aa7.02□□□□□ -1.28
RFX3-202ENST00000358730 SLC25A48Q6ZT89 311 aaKnown RBP7.02□□□□□ -1.28
RFX3-202ENST00000358730 C22orf34Q6ZV56 151 aa7.02□□□□□ -1.28
RFX3-202ENST00000358730 C11orf52Q96A22 123 aa7.02□□□□□ -1.28
RFX3-202ENST00000358730 RPUSD1Q9UJJ7 312 aaKnown RBP7.02□□□□□ -1.28
RFX3-202ENST00000358730 ZNF257Q9Y2Q1 563 aa7.02□□□□□ -1.28
RFX3-202ENST00000358730 SRRM4A7MD48 611 aaKnown RBP7.02□□□□□ -1.29
RFX3-202ENST00000358730 FNDC10F2Z333 226 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 SLC17A3O00476 420 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 CD40P25942 277 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 ADMP35318 185 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 HLA-DRB5Q30154 266 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 IGFL3Q6UXB1 125 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 ZNF664Q8N3J9 261 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 NABP2Q9BQ15 211 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 ROS1P08922 2347 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 hADV38S2A0JD32 116 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 NKX6-3A6NJ46 265 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 C9JCJ5 164 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 MKRN2OSH3BPM6 223 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 TM4SF5O14894 197 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 OR7C2O60412 319 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 LINC00869P0C866 280 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 SAA1P0DJI8 122 aaPredicted RBP7.02□□□□□ -1.29
RFX3-202ENST00000358730 CBLN1P23435 193 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 GATA2P23769 480 aaPredicted RBP7.02□□□□□ -1.29
RFX3-202ENST00000358730 CCL8P80075 99 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 IGF2-ASQ6U949 168 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 Q6ZS92 163 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 TMEM256Q8N2U0 113 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 EAF1Q96JC9 268 aaPredicted RBP7.02□□□□□ -1.29
RFX3-202ENST00000358730 IL36BQ9NZH7 164 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 SLC45A2Q9UMX9 530 aa7.02□□□□□ -1.29
RFX3-202ENST00000358730 IGKV1OR2-108A0A075B7D4 117 aa7.01□□□□□ -1.29
RFX3-202ENST00000358730 GRIFINA4D1Z8 144 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms