RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 MAP1LC3B2A6NCE7 125 aa13.18□□□□□ -0.3
PTPN5-201ENST00000358540 TMEM14EPQ6UXP3 125 aa13.18□□□□□ -0.3
PTPN5-201ENST00000358540 MAP1LC3BQ9GZQ8 125 aa13.18□□□□□ -0.3
PTPN5-201ENST00000358540 HIPK2Q9H2X6 1198 aa13.18□□□□□ -0.3
PTPN5-201ENST00000358540 RAB29O14966 203 aa13.17□□□□□ -0.3
PTPN5-201ENST00000358540 YPEL1O60688 119 aa13.17□□□□□ -0.3
PTPN5-201ENST00000358540 IFNA1P01562 189 aa13.17□□□□□ -0.3
PTPN5-201ENST00000358540 CT45A1Q5HYN5 189 aa13.17□□□□□ -0.3
PTPN5-201ENST00000358540 PRAMEF5Q5TYX0 476 aa13.17□□□□□ -0.3
PTPN5-201ENST00000358540 CT45A3Q8NHU0 189 aa13.17□□□□□ -0.3
PTPN5-201ENST00000358540 LHX4Q969G2 390 aa13.17□□□□□ -0.3
PTPN5-201ENST00000358540 YPEL2Q96QA6 119 aa13.17□□□□□ -0.3
PTPN5-201ENST00000358540 TRGV8A0A0C4DH27 118 aa13.17□□□□□ -0.3
PTPN5-201ENST00000358540 LRRC75BQ2VPJ9 315 aa13.17□□□□□ -0.3
PTPN5-201ENST00000358540 LYG1Q8N1E2 194 aa13.17□□□□□ -0.3
PTPN5-201ENST00000358540 MBD3L1Q8WWY6 194 aa13.17□□□□□ -0.3
PTPN5-201ENST00000358540 WDR61Q9GZS3 305 aaKnown RBP13.17□□□□□ -0.3
PTPN5-201ENST00000358540 SSUH2Q9Y2M2 353 aa13.17□□□□□ -0.3
PTPN5-201ENST00000358540 FAM90A26D6RGX4 464 aa13.17□□□□□ -0.3
PTPN5-201ENST00000358540 F2RL2O00254 374 aa13.17□□□□□ -0.3
PTPN5-201ENST00000358540 KBTBD11O94819 623 aa13.17□□□□□ -0.3
PTPN5-201ENST00000358540 CHRNA7P36544 502 aa13.17□□□□□ -0.3
PTPN5-201ENST00000358540 DNAJC4Q9NNZ3 241 aa13.17□□□□□ -0.3
PTPN5-201ENST00000358540 SLC39A9Q9NUM3 307 aa13.17□□□□□ -0.3
PTPN5-201ENST00000358540 TRGV10A0A0A0MS01 117 aa13.16□□□□□ -0.3
PTPN5-201ENST00000358540 DEFA4P12838 97 aa13.16□□□□□ -0.3
PTPN5-201ENST00000358540 MEF2BQ02080 365 aaPredicted RBP13.16□□□□□ -0.3
PTPN5-201ENST00000358540 C11orf42Q8N5U0 333 aa13.16□□□□□ -0.3
PTPN5-201ENST00000358540 NUP37Q8NFH4 326 aa13.16□□□□□ -0.3
PTPN5-201ENST00000358540 FAM222BQ8WU58 562 aa13.16□□□□□ -0.3
PTPN5-201ENST00000358540 CCL17Q92583 94 aa13.16□□□□□ -0.3
PTPN5-201ENST00000358540 MIEN1Q9BRT3 115 aa13.16□□□□□ -0.3
PTPN5-201ENST00000358540 RAXQ9Y2V3 346 aa13.16□□□□□ -0.3
PTPN5-201ENST00000358540 HCFC1P51610 2035 aa13.16□□□□□ -0.3
PTPN5-201ENST00000358540 SAA2-SAA4A0A096LPE2 208 aa13.16□□□□□ -0.3
PTPN5-201ENST00000358540 KBTBD11-OT1A0A1B0GTJ5 212 aa13.16□□□□□ -0.3
PTPN5-201ENST00000358540 SAA2P0DJI9 122 aaPredicted RBP13.16□□□□□ -0.3
PTPN5-201ENST00000358540 TFF3Q07654 80 aa13.16□□□□□ -0.3
PTPN5-201ENST00000358540 ZCCHC14Q8WYQ9 949 aaKnown RBP13.16□□□□□ -0.3
PTPN5-201ENST00000358540 TAF15Q92804 592 aaKnown RBP eCLIP13.16□□□□□ -0.3
PTPN5-201ENST00000358540 PARLQ9H300 379 aa13.16□□□□□ -0.3
PTPN5-201ENST00000358540 AURKAIP1Q9NWT8 199 aaPredicted RBP13.16□□□□□ -0.3
PTPN5-201ENST00000358540 ELOVL5Q9NYP7 299 aa13.16□□□□□ -0.3
PTPN5-201ENST00000358540 TRAPPC1Q9Y5R8 145 aa13.16□□□□□ -0.3
PTPN5-201ENST00000358540 A0A0U1RQK1 487 aa13.15□□□□□ -0.3
PTPN5-201ENST00000358540 ZNF320A2RRD8 509 aa13.15□□□□□ -0.3
PTPN5-201ENST00000358540 C17orf100A8MU93 164 aa13.15□□□□□ -0.3
PTPN5-201ENST00000358540 CGB3P0DN86 165 aa13.15□□□□□ -0.3
PTPN5-201ENST00000358540 CGB7P0DN87 165 aa13.15□□□□□ -0.3
PTPN5-201ENST00000358540 TMEM41BQ5BJD5 291 aa13.15□□□□□ -0.3
PTPN5-201ENST00000358540 PPIAL4AQ9Y536 164 aa13.15□□□□□ -0.3
PTPN5-201ENST00000358540 COTL1Q14019 142 aa13.15□□□□□ -0.3
PTPN5-201ENST00000358540 FAM78BQ5VT40 261 aa13.15□□□□□ -0.3
PTPN5-201ENST00000358540 S1PR3Q99500 378 aa13.15□□□□□ -0.3
PTPN5-201ENST00000358540 ZNF835Q9Y2P0 537 aa13.15□□□□□ -0.3
PTPN5-201ENST00000358540 COL6A6A6NMZ7 2263 aa13.15□□□□□ -0.3
PTPN5-201ENST00000358540 IGKV1D-33P01593 117 aa13.15□□□□□ -0.31
PTPN5-201ENST00000358540 IGKV1-33P01594 117 aa13.15□□□□□ -0.31
PTPN5-201ENST00000358540 CR1LQ2VPA4 569 aa13.15□□□□□ -0.31
PTPN5-201ENST00000358540 ZNF788Q6ZQV5 615 aa13.15□□□□□ -0.31
PTPN5-201ENST00000358540 OR4F5Q8NH21 305 aa13.15□□□□□ -0.31
PTPN5-201ENST00000358540 OR4F4Q96R69 305 aa13.15□□□□□ -0.31
PTPN5-201ENST00000358540 ABCA4P78363 2273 aa13.14□□□□□ -0.31
PTPN5-201ENST00000358540 RND1Q92730 232 aa13.14□□□□□ -0.31
PTPN5-201ENST00000358540 SAP30LQ9HAJ7 183 aa13.14□□□□□ -0.31
PTPN5-201ENST00000358540 CHD8Q9HCK8 2581 aa13.14□□□□□ -0.31
PTPN5-201ENST00000358540 MYOD1P15172 320 aa13.14□□□□□ -0.31
PTPN5-201ENST00000358540 OR10P1Q8NGE3 313 aa13.14□□□□□ -0.31
PTPN5-201ENST00000358540 GATAD1Q8WUU5 269 aa13.14□□□□□ -0.31
PTPN5-201ENST00000358540 GRIFINA4D1Z8 144 aa13.13□□□□□ -0.31
PTPN5-201ENST00000358540 PMS2P5A8MQ11 134 aa13.13□□□□□ -0.31
PTPN5-201ENST00000358540 IL6RP08887 468 aaPredicted RBP13.13□□□□□ -0.31
PTPN5-201ENST00000358540 ACSM6Q6P461 480 aa13.13□□□□□ -0.31
PTPN5-201ENST00000358540 OR4A16Q8NH70 328 aa13.13□□□□□ -0.31
PTPN5-201ENST00000358540 MANBALQ9NQG1 85 aa13.13□□□□□ -0.31
PTPN5-201ENST00000358540 JKAMPQ9P055 326 aa13.13□□□□□ -0.31
PTPN5-201ENST00000358540 FAM90A27PA6NNH2 459 aa13.13□□□□□ -0.31
PTPN5-201ENST00000358540 GFRA3O60609 400 aa13.13□□□□□ -0.31
PTPN5-201ENST00000358540 CCL3L1P16619 93 aa13.13□□□□□ -0.31
PTPN5-201ENST00000358540 IL3RAP26951 378 aa13.13□□□□□ -0.31
PTPN5-201ENST00000358540 RAB7AP51149 207 aa13.13□□□□□ -0.31
PTPN5-201ENST00000358540 KCNIP4Q6PIL6 250 aa13.13□□□□□ -0.31
PTPN5-201ENST00000358540 VN1R17PQ8TDU5 208 aa13.13□□□□□ -0.31
PTPN5-201ENST00000358540 SLC25A22Q9H936 323 aa13.13□□□□□ -0.31
PTPN5-201ENST00000358540 PATZ1Q9HBE1 687 aaKnown RBP13.13□□□□□ -0.31
PTPN5-201ENST00000358540 TMEM140Q9NV12 185 aa13.13□□□□□ -0.31
PTPN5-201ENST00000358540 PSMB3P49720 205 aa13.13□□□□□ -0.31
PTPN5-201ENST00000358540 ERVK-16P61578 105 aa13.13□□□□□ -0.31
PTPN5-201ENST00000358540 CENPVQ7Z7K6 275 aaPredicted RBP13.13□□□□□ -0.31
PTPN5-201ENST00000358540 TMEM106BQ9NUM4 274 aa13.13□□□□□ -0.31
PTPN5-201ENST00000358540 DSCAML1Q8TD84 2053 aa13.12□□□□□ -0.31
PTPN5-201ENST00000358540 NCOR2Q9Y618 2525 aa13.12□□□□□ -0.31
PTPN5-201ENST00000358540 FCN3O75636 299 aa13.12□□□□□ -0.31
PTPN5-201ENST00000358540 TNFRSF1AP19438 455 aa13.12□□□□□ -0.31
PTPN5-201ENST00000358540 GRNP28799 593 aaKnown RBP13.12□□□□□ -0.31
PTPN5-201ENST00000358540 COL5A1-AS1Q5SY13 56 aa13.12□□□□□ -0.31
PTPN5-201ENST00000358540 TCTEX1D1Q8N7M0 179 aa13.12□□□□□ -0.31
PTPN5-201ENST00000358540 RNASE8Q8TDE3 154 aaKnown RBP13.12□□□□□ -0.31
PTPN5-201ENST00000358540 ANAPC16Q96DE5 110 aa13.12□□□□□ -0.31
PTPN5-201ENST00000358540 C15orf62A8K5M9 175 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms