RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 M0QZK8 103 aa5.46□□□□□ -1.53
CSDE1-203ENST00000358528 M0R2Z0 102 aa5.46□□□□□ -1.53
CSDE1-203ENST00000358528 ADH4P08319 380 aa5.46□□□□□ -1.53
CSDE1-203ENST00000358528 ORM2P19652 201 aa5.46□□□□□ -1.53
CSDE1-203ENST00000358528 OPRK1P41145 380 aa5.46□□□□□ -1.53
CSDE1-203ENST00000358528 GPR6P46095 362 aaPredicted RBP5.46□□□□□ -1.53
CSDE1-203ENST00000358528 RAB7AP51149 207 aa5.46□□□□□ -1.53
CSDE1-203ENST00000358528 TDGF1P3P51864 188 aa5.46□□□□□ -1.53
CSDE1-203ENST00000358528 ZNF137PP52743 207 aa5.46□□□□□ -1.53
CSDE1-203ENST00000358528 NRN1LQ496H8 165 aa5.46□□□□□ -1.53
CSDE1-203ENST00000358528 COL5A1-AS1Q5SY13 56 aa5.46□□□□□ -1.53
CSDE1-203ENST00000358528 DAZAP1Q96EP5 407 aaKnown RBP5.46□□□□□ -1.53
CSDE1-203ENST00000358528 NABP2Q9BQ15 211 aa5.46□□□□□ -1.53
CSDE1-203ENST00000358528 IL19Q9UHD0 177 aa5.46□□□□□ -1.53
CSDE1-203ENST00000358528 RNF24Q9Y225 148 aa5.46□□□□□ -1.53
CSDE1-203ENST00000358528 CBY1Q9Y3M2 126 aa5.46□□□□□ -1.53
CSDE1-203ENST00000358528 OR51B2Q9Y5P1 312 aa5.46□□□□□ -1.53
CSDE1-203ENST00000358528 CACNA1BQ00975 2339 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 C19orf67A6NJJ6 358 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 C10orf142B7Z368 130 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 C9orf172C9J069 976 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 NTN3O00634 580 aaPredicted RBP5.46□□□□□ -1.54
CSDE1-203ENST00000358528 MLNRO43193 412 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 APCSP02743 223 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 CHRNB4P30926 498 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 EFNB3Q15768 340 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 MLANAQ16655 118 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 WDR82Q6UXN9 313 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 Q6ZWC4 215 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 OR2V2Q96R30 315 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 TMEM208Q9BTX3 173 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 OPN3Q9H1Y3 402 aaPredicted RBP5.46□□□□□ -1.54
CSDE1-203ENST00000358528 GNB4Q9HAV0 340 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 NRN1Q9NPD7 142 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 ZNF355PQ9NSJ1 428 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 ZNF835Q9Y2P0 537 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 TTC28Q96AY4 2481 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 CEP192Q8TEP8 1941 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 FREM2Q5SZK8 3169 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 TRGV10A0A0A0MS01 117 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 TRBV6-6A0A0A6YYG2 114 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 TMEM210A6NLX4 147 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 MPDU1O75352 247 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 DUTP33316 252 aaKnown RBP5.46□□□□□ -1.54
CSDE1-203ENST00000358528 PCP4P48539 62 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 ZNF146Q15072 292 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 STUMQ69YW2 141 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 LCN12Q6JVE5 192 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 Q8NFD4 153 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 CORO2AQ92828 525 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 EAF1Q96JC9 268 aaPredicted RBP5.46□□□□□ -1.54
CSDE1-203ENST00000358528 MIEN1Q9BRT3 115 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 DNAJC4Q9NNZ3 241 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 PLXNB1O43157 2135 aa5.46□□□□□ -1.54
CSDE1-203ENST00000358528 FOXA3P55318 350 aaPredicted RBP5.45□□□□□ -1.54
CSDE1-203ENST00000358528 GABRA6Q16445 453 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 ETFRF1Q6IPR1 90 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 DIRC2Q96SL1 478 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 CCL13Q99616 98 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 SSBP4Q9BWG4 385 aaPredicted RBP5.45□□□□□ -1.54
CSDE1-203ENST00000358528 MBNL3Q9NUK0 354 aaKnown RBP5.45□□□□□ -1.54
CSDE1-203ENST00000358528 SPRR3Q9UBC9 169 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 TRBV20OR9-2A0A075B6H5 130 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 CECR9P0C854 216 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 STAG3L2P0CL84 134 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 STAG3L3P0CL85 134 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 MZT1Q08AG7 82 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 RTL8BQ17RB0 113 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 KRTAP27-1Q3LI81 207 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 WDR73Q6P4I2 378 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 Q6ZR03 302 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 FAM214BQ7L5A3 538 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 ITLN1Q8WWA0 313 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 C5orf30Q96GV9 206 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 PYGO2Q9BRQ0 406 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 TMEM167BQ9NRX6 74 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 CALYQ9NYX4 217 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 ZNRD1Q9P1U0 126 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 PROCRQ9UNN8 238 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 SSUH2Q9Y2M2 353 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 ABCA4P78363 2273 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 HSBP1L1C9JCN9 74 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 TMPRSS2O15393 492 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 APOA2P02652 100 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 SLC25A5P05141 298 aaKnown RBP5.45□□□□□ -1.54
CSDE1-203ENST00000358528 REG1AP05451 166 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 ERHP84090 104 aaKnown RBP5.45□□□□□ -1.54
CSDE1-203ENST00000358528 FOXL1Q12952 345 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 RNFT1Q5M7Z0 435 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 OR4A47Q6IF82 309 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 INO80CQ6PI98 192 aaPredicted RBP5.45□□□□□ -1.54
CSDE1-203ENST00000358528 C1orf210Q8IVY1 113 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 KLHDC1Q8N7A1 406 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 TCTEX1D1Q8N7M0 179 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 GMPPAQ96IJ6 420 aaPredicted RBP5.45□□□□□ -1.54
CSDE1-203ENST00000358528 LINC00479Q96M42 142 aa5.45□□□□□ -1.54
CSDE1-203ENST00000358528 TRAV5A0A0B4J249 113 aa5.44□□□□□ -1.54
CSDE1-203ENST00000358528 DLEU1O43261 78 aa5.44□□□□□ -1.54
CSDE1-203ENST00000358528 HSPE1P61604 102 aaKnown RBP5.44□□□□□ -1.54
CSDE1-203ENST00000358528 MORN2Q502X0 79 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms