RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 FAM53AQ6NSI3 398 aaPredicted RBP7.51□□□□□ -1.21
COL6A6-201ENST00000358511 TMEM108Q6UXF1 575 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 FMC1Q96HJ9 113 aa7.51□□□□□ -1.21
COL6A6-201ENST00000358511 SCO2A0A1W2PP80 73 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 SLC25A40Q8TBP6 338 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 GPHA2Q96T91 129 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 WDR90Q96KV7 1748 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 SSTR5P35346 364 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 FOXA3P55318 350 aaPredicted RBP7.5□□□□□ -1.21
COL6A6-201ENST00000358511 ZNF146Q15072 292 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 OR4A5Q8NH83 315 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 COL4A1P02462 1669 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 IGHV1-69-2A0A0G2JMI3 117 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 PEBP1P30086 187 aaKnown RBP7.5□□□□□ -1.21
COL6A6-201ENST00000358511 CCL7P80098 99 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 OR2H2O95918 312 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 ACTL10Q5JWF8 245 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 TM2D1Q9BX74 207 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 INSIG2Q9Y5U4 225 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 C17orf51A8MQB3 221 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 SNAI2O43623 268 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 IGHV2-70P01814 119 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 NUP210LQ5VU65 1888 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 APOHP02749 345 aaPredicted RBP7.5□□□□□ -1.21
COL6A6-201ENST00000358511 SPRED2Q7Z698 418 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 PLXNA4Q9HCM2 1894 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 A8MWP6 167 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 TPTE2P1Q5T6R2 138 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 UBE2DNLQ8IWF7 75 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 NPFFR1Q9GZQ6 430 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 IGHV1OR21-1A0A087WYE8 117 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 TRAV8-2A0A0B4J237 113 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 PF4P02776 101 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 KIR2DL4Q99706 377 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 TMUB1Q9BVT8 246 aa7.5□□□□□ -1.21
COL6A6-201ENST00000358511 PGPA6NDG6 321 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 CXCL1P09341 107 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 TM4SF20Q53R12 229 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 LRTM2Q8N967 370 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 SYT8Q8NBV8 401 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 OR2K2Q8NGT1 345 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 C1RLQ9NZP8 487 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 SAMD5Q5TGI4 173 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 MALRD1Q5VYJ5 2156 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 MKRN2OSH3BPM6 223 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 ANOS1P23352 680 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 COX7A1P24310 79 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 UCP1P25874 307 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 TRA2AQ13595 282 aaKnown RBP eCLIP7.49□□□□□ -1.21
COL6A6-201ENST00000358511 GCSAMLQ5JQS6 135 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 SRSF5Q13243 272 aaKnown RBP7.49□□□□□ -1.21
COL6A6-201ENST00000358511 SSPNQ14714 243 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 C10orf128Q5T292 105 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 SPEM1Q8N4L4 309 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 RPP21Q9H633 154 aaKnown RBP7.49□□□□□ -1.21
COL6A6-201ENST00000358511 BRWD3Q6RI45 1802 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 GAGE12BA1L429 117 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 PRSS53Q2L4Q9 553 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 ASCL4Q6XD76 172 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 ORMDL3Q8N138 153 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 CHCHD1Q96BP2 118 aaKnown RBP7.49□□□□□ -1.21
COL6A6-201ENST00000358511 NABP2Q9BQ15 211 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 TRAV1-1A0A0B4J248 108 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 PRR32B1ATL7 298 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 GZMBP10144 247 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 RAB9AP51151 201 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 MOGAT3Q86VF5 341 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 UBALD2Q8IYN6 164 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 F2RL2O00254 374 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 PLPPR1Q8TBJ4 325 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 GATAD1Q8WUU5 269 aa7.49□□□□□ -1.21
COL6A6-201ENST00000358511 HSD52Q0P140 79 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 ZNF441Q8N8Z8 693 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 PAPPA-AS1Q5QFB9 102 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 RNASEH2CQ8TDP1 164 aaKnown RBP7.48□□□□□ -1.21
COL6A6-201ENST00000358511 SOX8P57073 446 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 GAGE13Q4V321 117 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 C18orf12Q96KH6 178 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 PRELID3AQ96N28 172 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 C18orf15Q96N68 181 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 PEX7O00628 323 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 CDX4O14627 284 aaPredicted RBP7.48□□□□□ -1.21
COL6A6-201ENST00000358511 ACSF3Q4G176 576 aaPredicted RBP7.48□□□□□ -1.21
COL6A6-201ENST00000358511 TMEM52Q8NDY8 209 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 TMEM56-RWDD3S4R434 201 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 PTGDSP41222 190 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 SLC25A47Q6Q0C1 308 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 METTL26Q96S19 204 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 A0A0G2JLM5 398 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 A0A1W2PQM1 296 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 RRHO14718 337 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 PRDX2P32119 198 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 HSPE1P61604 102 aaKnown RBP7.48□□□□□ -1.21
COL6A6-201ENST00000358511 GOLT1AQ6ZVE7 132 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 PHLDA1Q8WV24 401 aaPredicted RBP7.48□□□□□ -1.21
COL6A6-201ENST00000358511 SPANXA1Q9NS26 97 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 HILPDAQ9Y5L2 63 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 NUP210Q8TEM1 1887 aaPredicted RBP7.48□□□□□ -1.21
COL6A6-201ENST00000358511 J3QRE1 110 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 SPINK2P20155 84 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms