RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 A0A1B0GUT8 65 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 EFNB1P98172 346 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 SPRED2Q7Z698 418 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 COQ2Q96H96 371 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 FBXL7Q9UJT9 491 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 TRBV5-3A0A0A0MS03 114 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 PRR33A8MZF0 331 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 HOXA3O43365 443 aaPredicted RBP9.49□□□□□ -0.89
COL11A1-202ENST00000358392 CD7P09564 240 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 SRSF6Q13247 344 aaKnown RBP9.49□□□□□ -0.89
COL11A1-202ENST00000358392 ZNF585BQ52M93 769 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 RCC1LQ96I51 464 aaKnown RBP9.49□□□□□ -0.89
COL11A1-202ENST00000358392 NAA38Q9BRA0 125 aaKnown RBP9.49□□□□□ -0.89
COL11A1-202ENST00000358392 Q9H3A6 140 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 RPRMQ9NS64 109 aa9.49□□□□□ -0.89
COL11A1-202ENST00000358392 NUTF2P61970 127 aaKnown RBP9.48□□□□□ -0.89
COL11A1-202ENST00000358392 FBLN7Q53RD9 439 aa9.48□□□□□ -0.89
COL11A1-202ENST00000358392 SLC22A18ASQ8N1D0 253 aa9.48□□□□□ -0.89
COL11A1-202ENST00000358392 OR9G1Q8NH87 305 aa9.48□□□□□ -0.89
COL11A1-202ENST00000358392 FMC1Q96HJ9 113 aa9.48□□□□□ -0.89
COL11A1-202ENST00000358392 ABCA3Q99758 1704 aa9.48□□□□□ -0.89
COL11A1-202ENST00000358392 FAM90A26D6RGX4 464 aa9.48□□□□□ -0.89
COL11A1-202ENST00000358392 SERF1AO75920 110 aa9.48□□□□□ -0.89
COL11A1-202ENST00000358392 ZNF708P17019 499 aa9.48□□□□□ -0.89
COL11A1-202ENST00000358392 Q96M66 194 aa9.48□□□□□ -0.89
COL11A1-202ENST00000358392 C1QAP02745 245 aa9.48□□□□□ -0.89
COL11A1-202ENST00000358392 ZNF257Q9Y2Q1 563 aa9.48□□□□□ -0.89
COL11A1-202ENST00000358392 KIR3DL3Q8N743 410 aa9.48□□□□□ -0.89
COL11A1-202ENST00000358392 LSM4Q9Y4Z0 139 aaKnown RBP9.48□□□□□ -0.89
COL11A1-202ENST00000358392 TMEM249Q2WGJ8 235 aa9.48□□□□□ -0.89
COL11A1-202ENST00000358392 SLC25A2Q9BXI2 301 aa9.48□□□□□ -0.89
COL11A1-202ENST00000358392 HBDP02042 147 aa9.48□□□□□ -0.89
COL11A1-202ENST00000358392 DNM1P46Q6ZS02 220 aa9.48□□□□□ -0.89
COL11A1-202ENST00000358392 VCX2Q9H322 139 aa9.48□□□□□ -0.89
COL11A1-202ENST00000358392 RNF115Q9Y4L5 304 aa9.48□□□□□ -0.89
COL11A1-202ENST00000358392 IGKV1-8A0A0C4DH67 115 aa9.47□□□□□ -0.89
COL11A1-202ENST00000358392 PRTN3P24158 256 aa9.47□□□□□ -0.89
COL11A1-202ENST00000358392 GATD1Q8NB37 220 aa9.47□□□□□ -0.89
COL11A1-202ENST00000358392 SIGMAR1Q99720 223 aa9.47□□□□□ -0.89
COL11A1-202ENST00000358392 IGLV1-36A0A0B4J1U3 117 aa9.47□□□□□ -0.89
COL11A1-202ENST00000358392 LINC00587B1AMM8 73 aa9.47□□□□□ -0.89
COL11A1-202ENST00000358392 PCOLCEQ15113 449 aa9.47□□□□□ -0.89
COL11A1-202ENST00000358392 ZNF501Q96CX3 271 aaPredicted RBP9.47□□□□□ -0.89
COL11A1-202ENST00000358392 G6PC2Q9NQR9 355 aa9.47□□□□□ -0.89
COL11A1-202ENST00000358392 PIN1P1O15428 100 aa9.47□□□□□ -0.89
COL11A1-202ENST00000358392 LDLRAD2Q5SZI1 272 aa9.47□□□□□ -0.89
COL11A1-202ENST00000358392 LRTM2Q8N967 370 aa9.47□□□□□ -0.89
COL11A1-202ENST00000358392 TMEM186Q96B77 213 aa9.47□□□□□ -0.89
COL11A1-202ENST00000358392 CTSBP07858 339 aa9.47□□□□□ -0.89
COL11A1-202ENST00000358392 ORMDL3Q8N138 153 aa9.47□□□□□ -0.89
COL11A1-202ENST00000358392 EDA2RQ9HAV5 297 aa9.47□□□□□ -0.89
COL11A1-202ENST00000358392 LAMTOR2Q9Y2Q5 125 aa9.47□□□□□ -0.89
COL11A1-202ENST00000358392 ZNF831Q5JPB2 1677 aa9.47□□□□□ -0.89
COL11A1-202ENST00000358392 MSGN1A6NI15 193 aa9.47□□□□□ -0.89
COL11A1-202ENST00000358392 ZNF415Q09FC8 603 aa9.47□□□□□ -0.89
COL11A1-202ENST00000358392 C5orf30Q96GV9 206 aa9.47□□□□□ -0.89
COL11A1-202ENST00000358392 C19orf24Q9BVV8 132 aa9.47□□□□□ -0.89
COL11A1-202ENST00000358392 OR52E5Q8NH55 327 aa9.46□□□□□ -0.89
COL11A1-202ENST00000358392 NRN1Q9NPD7 142 aa9.46□□□□□ -0.89
COL11A1-202ENST00000358392 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.46□□□□□ -0.89
COL11A1-202ENST00000358392 IZUMO1RA6ND01 250 aa9.46□□□□□ -0.89
COL11A1-202ENST00000358392 GPX4P36969 197 aaPredicted RBP9.46□□□□□ -0.89
COL11A1-202ENST00000358392 EGR4Q05215 589 aa9.46□□□□□ -0.89
COL11A1-202ENST00000358392 SPSB2Q99619 263 aa9.46□□□□□ -0.89
COL11A1-202ENST00000358392 MRPL20Q9BYC9 149 aaKnown RBP9.46□□□□□ -0.89
COL11A1-202ENST00000358392 NDUFS8O00217 210 aa9.46□□□□□ -0.9
COL11A1-202ENST00000358392 RNF182Q8N6D2 247 aa9.46□□□□□ -0.9
COL11A1-202ENST00000358392 PKIBQ9C010 78 aa9.46□□□□□ -0.9
COL11A1-202ENST00000358392 KIAA1551Q9HCM1 1747 aa9.46□□□□□ -0.9
COL11A1-202ENST00000358392 TRBV5-7A0A0A0MS05 114 aa9.46□□□□□ -0.9
COL11A1-202ENST00000358392 C17orf98A8MV24 154 aa9.46□□□□□ -0.9
COL11A1-202ENST00000358392 ZNF562Q6V9R5 426 aa9.46□□□□□ -0.9
COL11A1-202ENST00000358392 CHTOPQ9Y3Y2 248 aaKnown RBP9.46□□□□□ -0.9
COL11A1-202ENST00000358392 PAPPAQ13219 1627 aa9.46□□□□□ -0.9
COL11A1-202ENST00000358392 AHRRA9YTQ3 701 aa9.46□□□□□ -0.9
COL11A1-202ENST00000358392 UCP3P55916 312 aa9.46□□□□□ -0.9
COL11A1-202ENST00000358392 IFI27L2Q9H2X8 130 aa9.46□□□□□ -0.9
COL11A1-202ENST00000358392 KIAA0100Q14667 2235 aaKnown RBP9.46□□□□□ -0.9
COL11A1-202ENST00000358392 PPP1R27Q86WC6 154 aa9.46□□□□□ -0.9
COL11A1-202ENST00000358392 STHQ8IWL8 128 aa9.46□□□□□ -0.9
COL11A1-202ENST00000358392 ST20Q9HBF5 79 aa9.46□□□□□ -0.9
COL11A1-202ENST00000358392 IGHV3-73A0A0B4J1V6 119 aa9.45□□□□□ -0.9
COL11A1-202ENST00000358392 PQLC2LA1A4F0 135 aa9.45□□□□□ -0.9
COL11A1-202ENST00000358392 ZNF729A6NN14 1252 aaPredicted RBP9.45□□□□□ -0.9
COL11A1-202ENST00000358392 PTGDSP41222 190 aa9.45□□□□□ -0.9
COL11A1-202ENST00000358392 C1QL2Q7Z5L3 287 aa9.45□□□□□ -0.9
COL11A1-202ENST00000358392 C1orf174Q8IYL3 243 aa9.45□□□□□ -0.9
COL11A1-202ENST00000358392 NRXN3Q9Y4C0 1643 aa9.45□□□□□ -0.9
COL11A1-202ENST00000358392 ZNF688P0C7X2 276 aa9.45□□□□□ -0.9
COL11A1-202ENST00000358392 SRSF3P84103 164 aaKnown RBP9.45□□□□□ -0.9
COL11A1-202ENST00000358392 ATRAIDQ6UW56 229 aa9.45□□□□□ -0.9
COL11A1-202ENST00000358392 DUSP15Q9H1R2 295 aaPredicted RBP9.45□□□□□ -0.9
COL11A1-202ENST00000358392 CD24P25063 80 aa9.45□□□□□ -0.9
COL11A1-202ENST00000358392 C3orf36Q3SXR2 165 aa9.45□□□□□ -0.9
COL11A1-202ENST00000358392 UNC13CQ8NB66 2214 aa9.45□□□□□ -0.9
COL11A1-202ENST00000358392 CD28P10747 220 aa9.45□□□□□ -0.9
COL11A1-202ENST00000358392 LINC00158P58513 81 aa9.45□□□□□ -0.9
COL11A1-202ENST00000358392 UNQ9370/PRO34162Q6UXP9 181 aa9.45□□□□□ -0.9
COL11A1-202ENST00000358392 LOC105371267A0A1B0GV96 52 aa9.45□□□□□ -0.9
COL11A1-202ENST00000358392 IFI27P40305 119 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms