RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 TCTE3Q8IZS6 198 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 WNT10AQ9GZT5 417 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 NDUFA4L2Q9NRX3 87 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.68□□□□□ -0.54
CCNE1-202ENST00000357943 FKBP11Q9NYL4 201 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 A0A1B0GU03 582 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 HAX1O00165 279 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 IFNA21P01568 189 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 CRIP2P52943 208 aaPredicted RBP11.68□□□□□ -0.54
CCNE1-202ENST00000357943 PROK1P58294 105 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 FOXL1Q12952 345 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 SMCO1Q147U7 214 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 AARDQ4LEZ3 155 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 SPINK9Q5DT21 86 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 OR10W1Q8NGF6 305 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 OR1L8Q8NGR8 309 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 OR5B3Q8NH48 314 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 TMEM158Q8WZ71 300 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 OR10C1Q96KK4 312 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 SPIN2AQ99865 258 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 SPIN2BQ9BPZ2 258 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 HINT2Q9BX68 163 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 COA4Q9NYJ1 87 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 MGAT4CQ9UBM8 478 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 ZNF257Q9Y2Q1 563 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 TRAV41A0A0B4J266 112 aa11.67□□□□□ -0.54
CCNE1-202ENST00000357943 PITX3O75364 302 aa11.67□□□□□ -0.54
CCNE1-202ENST00000357943 IFNA17P01571 189 aa11.67□□□□□ -0.54
CCNE1-202ENST00000357943 SLC25A6P12236 298 aa11.67□□□□□ -0.54
CCNE1-202ENST00000357943 PPIFP30405 207 aaKnown RBP11.67□□□□□ -0.54
CCNE1-202ENST00000357943 HSPE1P61604 102 aaKnown RBP11.67□□□□□ -0.54
CCNE1-202ENST00000357943 AKIRIN2Q53H80 203 aa11.67□□□□□ -0.54
CCNE1-202ENST00000357943 C19orf54Q5BKX5 351 aa11.67□□□□□ -0.54
CCNE1-202ENST00000357943 UNQ5815/PRO19632Q6UWF5 114 aa11.67□□□□□ -0.54
CCNE1-202ENST00000357943 KLHDC1Q8N7A1 406 aa11.67□□□□□ -0.54
CCNE1-202ENST00000357943 ZNF580Q9UK33 172 aa11.67□□□□□ -0.54
CCNE1-202ENST00000357943 A0A1W2PN81 502 aa11.66□□□□□ -0.54
CCNE1-202ENST00000357943 FAM25EA8MYX2 175 aa11.66□□□□□ -0.54
CCNE1-202ENST00000357943 CHRNA7P36544 502 aa11.66□□□□□ -0.54
CCNE1-202ENST00000357943 PRCDQ00LT1 54 aa11.66□□□□□ -0.54
CCNE1-202ENST00000357943 CFHR3Q02985 330 aa11.66□□□□□ -0.54
CCNE1-202ENST00000357943 TMEM267Q0VDI3 215 aaPredicted RBP11.66□□□□□ -0.54
CCNE1-202ENST00000357943 AWAT1Q58HT5 328 aa11.66□□□□□ -0.54
CCNE1-202ENST00000357943 THOC7Q6I9Y2 204 aaKnown RBP11.66□□□□□ -0.54
CCNE1-202ENST00000357943 CENPVQ7Z7K6 275 aaPredicted RBP11.66□□□□□ -0.54
CCNE1-202ENST00000357943 OR1S1Q8NH92 325 aa11.66□□□□□ -0.54
CCNE1-202ENST00000357943 ZNF436Q9C0F3 470 aaPredicted RBP11.66□□□□□ -0.54
CCNE1-202ENST00000357943 TET2Q6N021 2002 aaPredicted RBP11.65□□□□□ -0.54
CCNE1-202ENST00000357943 A0A1B0GUS0 222 aa11.65□□□□□ -0.54
CCNE1-202ENST00000357943 C13orf42A0A1B0GVH6 325 aa11.65□□□□□ -0.54
CCNE1-202ENST00000357943 IGLC7A0M8Q6 106 aa11.65□□□□□ -0.54
CCNE1-202ENST00000357943 GOSR2O14653 212 aa11.65□□□□□ -0.54
CCNE1-202ENST00000357943 RGS13O14921 159 aa11.65□□□□□ -0.54
CCNE1-202ENST00000357943 SOX15O60248 233 aa11.65□□□□□ -0.54
CCNE1-202ENST00000357943 AREGP15514 252 aa11.65□□□□□ -0.54
CCNE1-202ENST00000357943 WT1-ASQ06250 92 aa11.65□□□□□ -0.54
CCNE1-202ENST00000357943 IAH1Q2TAA2 248 aaPredicted RBP11.65□□□□□ -0.54
CCNE1-202ENST00000357943 C19orf35Q6ZS72 473 aa11.65□□□□□ -0.54
CCNE1-202ENST00000357943 WIPF2Q8TF74 440 aaPredicted RBP11.65□□□□□ -0.54
CCNE1-202ENST00000357943 PDCD10Q9BUL8 212 aa11.65□□□□□ -0.54
CCNE1-202ENST00000357943 DNHD1Q96M86 4753 aa11.65□□□□□ -0.55
CCNE1-202ENST00000357943 PSMB11A5LHX3 300 aa11.64□□□□□ -0.55
CCNE1-202ENST00000357943 C5orf51A6NDU8 294 aa11.64□□□□□ -0.55
CCNE1-202ENST00000357943 SIX6O95475 246 aa11.64□□□□□ -0.55
CCNE1-202ENST00000357943 REG1AP05451 166 aa11.64□□□□□ -0.55
CCNE1-202ENST00000357943 SPCS3P61009 180 aa11.64□□□□□ -0.55
CCNE1-202ENST00000357943 PDLIM3Q53GG5 364 aaPredicted RBP11.64□□□□□ -0.55
CCNE1-202ENST00000357943 CXorf66Q5JRM2 361 aaPredicted RBP11.64□□□□□ -0.55
CCNE1-202ENST00000357943 OR5T1Q8NG75 326 aa11.64□□□□□ -0.55
CCNE1-202ENST00000357943 OR52E5Q8NH55 327 aa11.64□□□□□ -0.55
CCNE1-202ENST00000357943 GON7Q9BXV9 100 aa11.64□□□□□ -0.55
CCNE1-202ENST00000357943 HSPB7Q9UBY9 170 aa11.64□□□□□ -0.55
CCNE1-202ENST00000357943 TENM1Q9UKZ4 2725 aa11.64□□□□□ -0.55
CCNE1-202ENST00000357943 KRTAP10-3P60369 221 aa11.64□□□□□ -0.55
CCNE1-202ENST00000357943 TNFRSF9Q07011 255 aa11.64□□□□□ -0.55
CCNE1-202ENST00000357943 ZFP69Q49AA0 526 aa11.64□□□□□ -0.55
CCNE1-202ENST00000357943 HIST2H2BDQ6DRA6 164 aa11.64□□□□□ -0.55
CCNE1-202ENST00000357943 OR5AU1Q8NGC0 362 aa11.64□□□□□ -0.55
CCNE1-202ENST00000357943 OR4D5Q8NGN0 318 aa11.64□□□□□ -0.55
CCNE1-202ENST00000357943 OR5M8Q8NGP6 311 aa11.64□□□□□ -0.55
CCNE1-202ENST00000357943 TMEM68Q96MH6 324 aa11.64□□□□□ -0.55
CCNE1-202ENST00000357943 MDFIQ99750 246 aa11.64□□□□□ -0.55
CCNE1-202ENST00000357943 GSKIPQ9P0R6 139 aa11.64□□□□□ -0.55
CCNE1-202ENST00000357943 ANK2Q01484 3957 aa11.63□□□□□ -0.55
CCNE1-202ENST00000357943 COL6A5A8TX70 2615 aa11.63□□□□□ -0.55
CCNE1-202ENST00000357943 IGHG4P01861 327 aa11.63□□□□□ -0.55
CCNE1-202ENST00000357943 C1QBP02746 253 aa11.63□□□□□ -0.55
CCNE1-202ENST00000357943 GIPP09681 153 aaPredicted RBP11.63□□□□□ -0.55
CCNE1-202ENST00000357943 OR13C7P0DN81 318 aa11.63□□□□□ -0.55
CCNE1-202ENST00000357943 CTRB1P17538 263 aa11.63□□□□□ -0.55
CCNE1-202ENST00000357943 H2BFSP57053 126 aa11.63□□□□□ -0.55
CCNE1-202ENST00000357943 SLC35B1P78383 322 aa11.63□□□□□ -0.55
CCNE1-202ENST00000357943 CTRB2Q6GPI1 263 aa11.63□□□□□ -0.55
CCNE1-202ENST00000357943 C11orf87Q6NUJ2 197 aa11.63□□□□□ -0.55
CCNE1-202ENST00000357943 GSG1LQ6UXU4 331 aa11.63□□□□□ -0.55
CCNE1-202ENST00000357943 LCNL1Q6ZST4 164 aa11.63□□□□□ -0.55
CCNE1-202ENST00000357943 TTC9CQ8N5M4 171 aa11.63□□□□□ -0.55
CCNE1-202ENST00000357943 C11orf44Q8N8P7 122 aa11.63□□□□□ -0.55
CCNE1-202ENST00000357943 SRSF8Q9BRL6 282 aaKnown RBP11.63□□□□□ -0.55
CCNE1-202ENST00000357943 PLEKHA3Q9HB20 300 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms