RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 FAM216BQ8N7L0 139 aa5.68□□□□□ -1.5
RTN4-203ENST00000357376 CT45A3Q8NHU0 189 aa5.68□□□□□ -1.5
RTN4-203ENST00000357376 PRDM13Q9H4Q3 707 aa5.68□□□□□ -1.5
RTN4-203ENST00000357376 SEPSECSQ9HD40 501 aaKnown RBP5.68□□□□□ -1.5
RTN4-203ENST00000357376 TMEM265A0A087WTH1 108 aa5.68□□□□□ -1.5
RTN4-203ENST00000357376 IFNL4K9M1U5 179 aa5.68□□□□□ -1.5
RTN4-203ENST00000357376 RPLP1P05386 114 aaKnown RBP5.68□□□□□ -1.5
RTN4-203ENST00000357376 REG1AP05451 166 aa5.68□□□□□ -1.5
RTN4-203ENST00000357376 TNFRSF1AP19438 455 aa5.68□□□□□ -1.5
RTN4-203ENST00000357376 Q56UQ5 140 aa5.68□□□□□ -1.5
RTN4-203ENST00000357376 PRR31Q5SQ13 230 aa5.68□□□□□ -1.5
RTN4-203ENST00000357376 UNQ6494/PRO21346Q6UXR6 183 aa5.68□□□□□ -1.5
RTN4-203ENST00000357376 GGTLC1Q9BX51 225 aa5.68□□□□□ -1.5
RTN4-203ENST00000357376 MBNL3Q9NUK0 354 aaKnown RBP5.68□□□□□ -1.5
RTN4-203ENST00000357376 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.68□□□□□ -1.5
RTN4-203ENST00000357376 M0R296 226 aa5.68□□□□□ -1.5
RTN4-203ENST00000357376 M0R2Z0 102 aa5.68□□□□□ -1.5
RTN4-203ENST00000357376 APCSP02743 223 aa5.68□□□□□ -1.5
RTN4-203ENST00000357376 CSN3P07498 182 aa5.68□□□□□ -1.5
RTN4-203ENST00000357376 ZNF137PP52743 207 aa5.68□□□□□ -1.5
RTN4-203ENST00000357376 MOB3BQ86TA1 216 aa5.68□□□□□ -1.5
RTN4-203ENST00000357376 CD177Q8N6Q3 437 aa5.68□□□□□ -1.5
RTN4-203ENST00000357376 Q8NFD4 153 aa5.68□□□□□ -1.5
RTN4-203ENST00000357376 TXNDC17Q9BRA2 123 aa5.68□□□□□ -1.5
RTN4-203ENST00000357376 WNK2Q9Y3S1 2297 aa5.68□□□□□ -1.5
RTN4-203ENST00000357376 SAA2-SAA4A0A096LPE2 208 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 C20orf202A1L168 122 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 NPIPB11E5RHQ5 1161 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 NDUFB3O43676 98 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 FOXH1O75593 365 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 SAA2P0DJI9 122 aaPredicted RBP5.67□□□□□ -1.5
RTN4-203ENST00000357376 TIMP3P35625 211 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 PAFAH1B2P68402 229 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 SRSF6Q13247 344 aaKnown RBP5.67□□□□□ -1.5
RTN4-203ENST00000357376 SPTAN1Q13813 2472 aaKnown RBP5.67□□□□□ -1.5
RTN4-203ENST00000357376 HES1Q14469 280 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 EFNB3Q15768 340 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 C10orf113Q5VZT2 155 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 HCP5Q6MZN7 132 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 TEX38Q6PEX7 206 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 MED12LQ86YW9 2145 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 ZCCHC14Q8WYQ9 949 aaKnown RBP5.67□□□□□ -1.5
RTN4-203ENST00000357376 FLYWCH2Q96CP2 140 aaKnown RBP5.67□□□□□ -1.5
RTN4-203ENST00000357376 GAL3ST2Q9H3Q3 398 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 PLCE1Q9P212 2302 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 CA1P00915 261 aaPredicted RBP5.67□□□□□ -1.5
RTN4-203ENST00000357376 PRSS8Q16651 343 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 C21orf62-AS1Q17RA5 79 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 VMA21Q3ZAQ7 101 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 PDPNQ86YL7 162 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 FAM19A2Q8N3H0 131 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 GBGT1Q8N5D6 347 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 KLHDC1Q8N7A1 406 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 AP1S3Q96PC3 154 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 MGST2Q99735 147 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 C11orf1Q9H5F2 150 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 IL36BQ9NZH7 164 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 PRRG2O14669 202 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 RBP4P02753 201 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 COX7A1P24310 79 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 TNXAQ16473 311 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 KRTAP27-1Q3LI81 207 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 LRRC10Q5BKY1 277 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 ACTL10Q5JWF8 245 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 ZCCHC24Q8N2G6 241 aaKnown RBP5.67□□□□□ -1.5
RTN4-203ENST00000357376 ZNF114Q8NC26 417 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 OR1L8Q8NGR8 309 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 AGMATQ9BSE5 352 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 PAXXQ9BUH6 204 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 WNT10AQ9GZT5 417 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 SLC25A10Q9UBX3 287 aaPredicted RBP5.67□□□□□ -1.5
RTN4-203ENST00000357376 KLK10O43240 276 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 SP9P0CG40 484 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 LYZP61626 148 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 SPATA45Q537H7 98 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 LBHQ53QV2 105 aaPredicted RBP5.67□□□□□ -1.5
RTN4-203ENST00000357376 TMEM108Q6UXF1 575 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 SAP30LQ9HAJ7 183 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 ZNF355PQ9NSJ1 428 aa5.67□□□□□ -1.5
RTN4-203ENST00000357376 EREGO14944 169 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 SS18L1O75177 396 aaPredicted RBP5.66□□□□□ -1.5
RTN4-203ENST00000357376 STAG3L2P0CL84 134 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 STAG3L3P0CL85 134 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 RNF151Q2KHN1 245 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 GCSAMQ8N6F7 178 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 NPIPB3Q92617 1050 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 TBL2Q9Y4P3 447 aaKnown RBP5.66□□□□□ -1.5
RTN4-203ENST00000357376 YTHDF2Q9Y5A9 579 aaKnown RBP5.66□□□□□ -1.5
RTN4-203ENST00000357376 MED13LQ71F56 2210 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 IGHV1-18A0A0C4DH31 117 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 GGCTO75223 188 aaKnown RBP5.66□□□□□ -1.5
RTN4-203ENST00000357376 C8orf88P0DMB2 117 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 RPL8P62917 257 aaKnown RBP5.66□□□□□ -1.5
RTN4-203ENST00000357376 VAMP3Q15836 100 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 OR1L4Q8NGR5 311 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 EAF1Q96JC9 268 aaPredicted RBP5.66□□□□□ -1.5
RTN4-203ENST00000357376 GP6Q9HCN6 339 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 TMEM106BQ9NUM4 274 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 IDI2-AS1Q9NZ38 188 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 EYSQ5T1H1 3165 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms