RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 FREM3P0C091 2139 aa9.93□□□□□ -0.82
COL9A1-202ENST00000357250 ZNF362Q5T0B9 420 aaPredicted RBP9.93□□□□□ -0.82
COL9A1-202ENST00000357250 SAMD13Q5VXD3 122 aa9.93□□□□□ -0.82
COL9A1-202ENST00000357250 CLDND2Q8NHS1 167 aa9.93□□□□□ -0.82
COL9A1-202ENST00000357250 FAM131CQ96AQ9 280 aa9.93□□□□□ -0.82
COL9A1-202ENST00000357250 GPR61Q9BZJ8 451 aa9.93□□□□□ -0.82
COL9A1-202ENST00000357250 LINC00312Q9Y6C7 94 aa9.93□□□□□ -0.82
COL9A1-202ENST00000357250 LOC389332A0A1B0GUA5 103 aa9.93□□□□□ -0.82
COL9A1-202ENST00000357250 TAS2R60P59551 318 aa9.93□□□□□ -0.82
COL9A1-202ENST00000357250 SRSF7Q16629 238 aaKnown RBP eCLIP9.93□□□□□ -0.82
COL9A1-202ENST00000357250 FDCSPQ8NFU4 85 aa9.93□□□□□ -0.82
COL9A1-202ENST00000357250 PGLYRP4Q96LB8 373 aa9.93□□□□□ -0.82
COL9A1-202ENST00000357250 GUCD1Q96NT3 240 aa9.93□□□□□ -0.82
COL9A1-202ENST00000357250 ABCA4P78363 2273 aa9.93□□□□□ -0.82
COL9A1-202ENST00000357250 SRP19P09132 144 aaKnown RBP9.93□□□□□ -0.82
COL9A1-202ENST00000357250 CENPWQ5EE01 88 aa9.93□□□□□ -0.82
COL9A1-202ENST00000357250 RAX2Q96IS3 184 aa9.93□□□□□ -0.82
COL9A1-202ENST00000357250 SIGLEC12Q96PQ1 595 aa9.93□□□□□ -0.82
COL9A1-202ENST00000357250 PTPRDP23468 1912 aa9.93□□□□□ -0.82
COL9A1-202ENST00000357250 ARF6P62330 175 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 CFHR1Q03591 330 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 C2orf83Q53S99 150 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 ZNF502Q8TBZ5 544 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 RAB37Q96AX2 223 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 RTN4RQ9BZR6 473 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 DOPEY2Q9Y3R5 2298 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 MSGN1A6NI15 193 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 HTN1P15515 57 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 C19orf54Q5BKX5 351 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 IL36BQ9NZH7 164 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 IGHV2OR16-5A0A0B4J2B6 119 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 AMMECR1LQ6DCA0 310 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 GAGE10A6NGK3 116 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 OR4C46A6NHA9 309 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 FAM90A9PA6NNJ1 464 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 YPEL1O60688 119 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 NBEAP1P0C6P0 100 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 PNKDQ8N490 385 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 FAM57AQ8TBR7 257 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 YPEL2Q96QA6 119 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 GPHA2Q96T91 129 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 THADAQ6YHU6 1953 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 ZNF407Q9C0G0 2248 aa9.92□□□□□ -0.82
COL9A1-202ENST00000357250 PRR19A6NJB7 356 aa9.91□□□□□ -0.82
COL9A1-202ENST00000357250 FHITP49789 147 aa9.91□□□□□ -0.82
COL9A1-202ENST00000357250 NUDT3O95989 172 aa9.91□□□□□ -0.82
COL9A1-202ENST00000357250 CEACAM1P13688 526 aa9.91□□□□□ -0.82
COL9A1-202ENST00000357250 LINC00305Q7Z4B0 112 aa9.91□□□□□ -0.82
COL9A1-202ENST00000357250 ZNRF1Q8ND25 227 aa9.91□□□□□ -0.82
COL9A1-202ENST00000357250 PSG7Q13046 419 aa9.91□□□□□ -0.82
COL9A1-202ENST00000357250 OR4A47Q6IF82 309 aa9.91□□□□□ -0.82
COL9A1-202ENST00000357250 SLC25A28Q96A46 364 aa9.91□□□□□ -0.82
COL9A1-202ENST00000357250 IL4P05112 153 aa9.91□□□□□ -0.82
COL9A1-202ENST00000357250 ZNF525Q8N782 197 aa9.91□□□□□ -0.82
COL9A1-202ENST00000357250 LRTM2Q8N967 370 aa9.91□□□□□ -0.82
COL9A1-202ENST00000357250 WBP1Q96G27 269 aa9.91□□□□□ -0.82
COL9A1-202ENST00000357250 KIR2DL4Q99706 377 aa9.91□□□□□ -0.82
COL9A1-202ENST00000357250 ZNF256Q9Y2P7 627 aaPredicted RBP9.91□□□□□ -0.82
COL9A1-202ENST00000357250 ZNF324O75467 553 aaPredicted RBP9.9□□□□□ -0.82
COL9A1-202ENST00000357250 BTCP35070 178 aa9.9□□□□□ -0.82
COL9A1-202ENST00000357250 SNRPD3P62318 126 aaKnown RBP9.9□□□□□ -0.82
COL9A1-202ENST00000357250 JOSD1Q15040 202 aaPredicted RBP9.9□□□□□ -0.82
COL9A1-202ENST00000357250 GOLT1AQ6ZVE7 132 aa9.9□□□□□ -0.82
COL9A1-202ENST00000357250 TMEM144Q7Z5S9 345 aa9.9□□□□□ -0.82
COL9A1-202ENST00000357250 TRAV14DV4A0A0A6YYC5 116 aa9.9□□□□□ -0.82
COL9A1-202ENST00000357250 F8VVB4 439 aa9.9□□□□□ -0.82
COL9A1-202ENST00000357250 F8VWA3 439 aa9.9□□□□□ -0.82
COL9A1-202ENST00000357250 TMEM105Q8N8V8 129 aa9.9□□□□□ -0.82
COL9A1-202ENST00000357250 WDYHV1Q96HA8 205 aa9.9□□□□□ -0.82
COL9A1-202ENST00000357250 C18orf12Q96KH6 178 aa9.9□□□□□ -0.82
COL9A1-202ENST00000357250 MUC6Q6W4X9 2439 aa9.9□□□□□ -0.82
COL9A1-202ENST00000357250 A0A0G2JLM5 398 aa9.9□□□□□ -0.82
COL9A1-202ENST00000357250 UMODP07911 640 aa9.9□□□□□ -0.82
COL9A1-202ENST00000357250 DLX6P56179 175 aa9.9□□□□□ -0.82
COL9A1-202ENST00000357250 CIRBPQ14011 172 aaKnown RBP9.9□□□□□ -0.82
COL9A1-202ENST00000357250 FMC1Q96HJ9 113 aa9.9□□□□□ -0.82
COL9A1-202ENST00000357250 KLHDC3Q9BQ90 382 aa9.9□□□□□ -0.82
COL9A1-202ENST00000357250 A0A087WV48 116 aa9.9□□□□□ -0.83
COL9A1-202ENST00000357250 GPX1P07203 203 aa9.9□□□□□ -0.83
COL9A1-202ENST00000357250 RRN3P1Q2M238 152 aa9.9□□□□□ -0.83
COL9A1-202ENST00000357250 ACSF3Q4G176 576 aaPredicted RBP9.9□□□□□ -0.83
COL9A1-202ENST00000357250 RPL39P5Q59GN2 51 aa9.9□□□□□ -0.83
COL9A1-202ENST00000357250 OR13A1Q8NGR1 328 aa9.9□□□□□ -0.83
COL9A1-202ENST00000357250 CHODLQ9H9P2 273 aa9.9□□□□□ -0.83
COL9A1-202ENST00000357250 C17orf98A8MV24 154 aa9.89□□□□□ -0.83
COL9A1-202ENST00000357250 EIF3GO75821 320 aaKnown RBP eCLIP9.89□□□□□ -0.83
COL9A1-202ENST00000357250 LHX2P50458 406 aa9.89□□□□□ -0.83
COL9A1-202ENST00000357250 CIARTQ8N365 385 aaPredicted RBP9.89□□□□□ -0.83
COL9A1-202ENST00000357250 LEAP2Q969E1 77 aa9.89□□□□□ -0.83
COL9A1-202ENST00000357250 SDF2L1Q9HCN8 221 aa9.89□□□□□ -0.83
COL9A1-202ENST00000357250 TP53BP1Q12888 1972 aaPredicted RBP9.89□□□□□ -0.83
COL9A1-202ENST00000357250 RRHO14718 337 aa9.89□□□□□ -0.83
COL9A1-202ENST00000357250 NR2C2APQ86WQ0 139 aa9.89□□□□□ -0.83
COL9A1-202ENST00000357250 FER1L5A0AVI2 2057 aa9.89□□□□□ -0.83
COL9A1-202ENST00000357250 IGKV3D-15A0A087WSY6 115 aa9.89□□□□□ -0.83
COL9A1-202ENST00000357250 H7C1H1 209 aa9.89□□□□□ -0.83
COL9A1-202ENST00000357250 PEX7O00628 323 aa9.89□□□□□ -0.83
COL9A1-202ENST00000357250 HERPUD1Q15011 391 aa9.89□□□□□ -0.83
COL9A1-202ENST00000357250 VKORC1L1Q8N0U8 176 aa9.89□□□□□ -0.83
COL9A1-202ENST00000357250 CELA3AP09093 270 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms