RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 POLR2GP62487 172 aaKnown RBP eCLIP3.16□□□□□ -1.9
LIG4-201ENST00000356922 WT1-ASQ06250 92 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 MLANAQ16655 118 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 ECSCRQ19T08 205 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 GGNBP1Q5YKI7 109 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 TMEM65Q6PI78 240 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 C18orf65Q6ZTR6 163 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 OR1S1Q8NH92 325 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 ZNF431Q8TF32 576 aaPredicted RBP3.16□□□□□ -1.9
LIG4-201ENST00000356922 TMEM170AQ8WVE7 144 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 OR2A7Q96R45 310 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 PARP11Q9NR21 331 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 C7orf66A4D0T2 115 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 PITX3O75364 302 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 IGHG2P01859 326 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 SNCAP37840 140 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 KIR2DS2P43631 304 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 LGALS7P47929 136 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 POU2AF1Q16633 256 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 STX12Q86Y82 276 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 LRTM2Q8N967 370 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 SPATA3Q8NHX4 192 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 FAM216AQ8WUB2 273 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 PRSS22Q9GZN4 317 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 MAGT1Q9H0U3 335 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 CACNG5Q9UF02 275 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 MOB4Q9Y3A3 225 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 NBEAL2Q6ZNJ1 2754 aa3.16□□□□□ -1.9
LIG4-201ENST00000356922 PIGBOS1A0A0B4J2F0 54 aa3.15□□□□□ -1.9
LIG4-201ENST00000356922 CEBPZOSA8MTT3 80 aa3.15□□□□□ -1.9
LIG4-201ENST00000356922 NUDT19A8MXV4 375 aa3.15□□□□□ -1.9
LIG4-201ENST00000356922 ST8SIA3O43173 380 aa3.15□□□□□ -1.9
LIG4-201ENST00000356922 CCNKO75909 580 aa3.15□□□□□ -1.9
LIG4-201ENST00000356922 IGHV3-48P01763 117 aa3.15□□□□□ -1.9
LIG4-201ENST00000356922 PPIFP30405 207 aaKnown RBP3.15□□□□□ -1.9
LIG4-201ENST00000356922 IL15RAQ13261 267 aa3.15□□□□□ -1.9
LIG4-201ENST00000356922 FCN2Q15485 313 aa3.15□□□□□ -1.9
LIG4-201ENST00000356922 C19orf54Q5BKX5 351 aa3.15□□□□□ -1.9
LIG4-201ENST00000356922 ZNF562Q6V9R5 426 aa3.15□□□□□ -1.9
LIG4-201ENST00000356922 OR5T1Q8NG75 326 aa3.15□□□□□ -1.9
LIG4-201ENST00000356922 VSTM2AQ8TAG5 236 aa3.15□□□□□ -1.9
LIG4-201ENST00000356922 TMEM167AQ8TBQ9 72 aa3.15□□□□□ -1.9
LIG4-201ENST00000356922 WIPF2Q8TF74 440 aaPredicted RBP3.15□□□□□ -1.9
LIG4-201ENST00000356922 TMEM14BQ9NUH8 114 aa3.15□□□□□ -1.9
LIG4-201ENST00000356922 A0A0B4J2A0 478 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 G3V3Q6 166 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 HLA-DRB1P01911 266 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 IL5P05113 134 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 VDAC1P21796 283 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 HOXA1P49639 335 aaPredicted RBP3.15□□□□□ -1.91
LIG4-201ENST00000356922 COMPP49747 757 aaPredicted RBP3.15□□□□□ -1.91
LIG4-201ENST00000356922 S100A12P80511 92 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 CD83Q01151 205 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 IFITM2Q01629 132 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 TMEM267Q0VDI3 215 aaPredicted RBP3.15□□□□□ -1.91
LIG4-201ENST00000356922 KIAA0141Q14154 515 aaPredicted RBP3.15□□□□□ -1.91
LIG4-201ENST00000356922 FXYD3Q14802 87 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 SLC35E3Q7Z769 313 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 MRPL41Q8IXM3 137 aaKnown RBP3.15□□□□□ -1.91
LIG4-201ENST00000356922 LGI3Q8N145 548 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 Q8N2B8 174 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 C12orf45Q8N5I9 185 aaPredicted RBP3.15□□□□□ -1.91
LIG4-201ENST00000356922 C3orf56Q8N813 242 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 TEX45Q8NA69 505 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 NDUFA4L2Q9NRX3 87 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 BET1LQ9NYM9 111 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 SHPKQ9UHJ6 478 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 S4R3C0 116 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 IGLC7A0M8Q6 106 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 H0YIZ8 118 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 SMLR1H3BR10 107 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 M0QZK8 103 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 CYB5BO43169 146 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 FGF16O43320 207 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 PAX9P55771 341 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 S100A10P60903 97 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 RPL8P62917 257 aaKnown RBP3.15□□□□□ -1.91
LIG4-201ENST00000356922 SLC35B1P78383 322 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 CFHR3Q02985 330 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 SMCO1Q147U7 214 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 ZFP69Q49AA0 526 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 TMEM86BQ8N661 226 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 SRSF12Q8WXF0 261 aaKnown RBP3.15□□□□□ -1.91
LIG4-201ENST00000356922 RNF5Q99942 180 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 WNT10AQ9GZT5 417 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 OR51J1Q9H342 316 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 COMMD9Q9P000 198 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 MMP24Q9Y5R2 645 aa3.15□□□□□ -1.91
LIG4-201ENST00000356922 C15orf61A6NNL5 157 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 L7N2F9 121 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 PF4V1P10720 104 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 HLA-GP17693 338 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 VDAC2P45880 294 aaPredicted RBP3.14□□□□□ -1.91
LIG4-201ENST00000356922 AP2S1P53680 142 aaPredicted RBP3.14□□□□□ -1.91
LIG4-201ENST00000356922 RAG2P55895 527 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 PROK1P58294 105 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 VAMP2P63027 116 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 SRPXP78539 464 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 LRRC37A5PQ49AS3 106 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 C12orf54Q6X4T0 127 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms