RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 TM2D1Q9BX74 207 aa11.88□□□□□ -0.51
SREBF1-202ENST00000355815 ATP23Q9Y6H3 246 aa11.88□□□□□ -0.51
SREBF1-202ENST00000355815 IGLV3-32A0A0A0MS00 114 aa11.88□□□□□ -0.51
SREBF1-202ENST00000355815 LCN12Q6JVE5 192 aa11.88□□□□□ -0.51
SREBF1-202ENST00000355815 FBLN7Q53RD9 439 aa11.88□□□□□ -0.51
SREBF1-202ENST00000355815 CENPWQ5EE01 88 aa11.88□□□□□ -0.51
SREBF1-202ENST00000355815 MOB3BQ86TA1 216 aa11.88□□□□□ -0.51
SREBF1-202ENST00000355815 TMEM170AQ8WVE7 144 aa11.88□□□□□ -0.51
SREBF1-202ENST00000355815 NPVFQ9HCQ7 196 aa11.88□□□□□ -0.51
SREBF1-202ENST00000355815 NGBQ9NPG2 151 aa11.88□□□□□ -0.51
SREBF1-202ENST00000355815 PSMB2P49721 201 aa11.87□□□□□ -0.51
SREBF1-202ENST00000355815 PRRX1P54821 245 aa11.87□□□□□ -0.51
SREBF1-202ENST00000355815 Q8IYB0 196 aa11.87□□□□□ -0.51
SREBF1-202ENST00000355815 FDCSPQ8NFU4 85 aa11.87□□□□□ -0.51
SREBF1-202ENST00000355815 WBP1Q96G27 269 aa11.87□□□□□ -0.51
SREBF1-202ENST00000355815 FAM157AC9JC47 383 aa11.87□□□□□ -0.51
SREBF1-202ENST00000355815 H7C2G1 150 aa11.87□□□□□ -0.51
SREBF1-202ENST00000355815 UCP2P55851 309 aa11.87□□□□□ -0.51
SREBF1-202ENST00000355815 FAM201AQ5SY85 155 aa11.87□□□□□ -0.51
SREBF1-202ENST00000355815 SFTA2Q6UW10 78 aa11.87□□□□□ -0.51
SREBF1-202ENST00000355815 MOGAT3Q86VF5 341 aa11.87□□□□□ -0.51
SREBF1-202ENST00000355815 WFDC3Q8IUB2 231 aa11.87□□□□□ -0.51
SREBF1-202ENST00000355815 MUC21A0A0G2JKD1 596 aa11.87□□□□□ -0.51
SREBF1-202ENST00000355815 MUC21A0A140T8X8 626 aa11.87□□□□□ -0.51
SREBF1-202ENST00000355815 NKX6-3A6NJ46 265 aa11.87□□□□□ -0.51
SREBF1-202ENST00000355815 C21orf140B9A014 251 aa11.87□□□□□ -0.51
SREBF1-202ENST00000355815 SP9P0CG40 484 aa11.87□□□□□ -0.51
SREBF1-202ENST00000355815 MUC21Q5SSG8 566 aa11.87□□□□□ -0.51
SREBF1-202ENST00000355815 DTX1Q86Y01 620 aa11.87□□□□□ -0.51
SREBF1-202ENST00000355815 LIME1Q9H400 295 aa11.87□□□□□ -0.51
SREBF1-202ENST00000355815 FNDC4Q9H6D8 234 aaPredicted RBP11.87□□□□□ -0.51
SREBF1-202ENST00000355815 PROK2Q9HC23 129 aa11.87□□□□□ -0.51
SREBF1-202ENST00000355815 CRYGSP22914 178 aa11.86□□□□□ -0.51
SREBF1-202ENST00000355815 GCSAMLQ5JQS6 135 aa11.86□□□□□ -0.51
SREBF1-202ENST00000355815 TEX38Q6PEX7 206 aa11.86□□□□□ -0.51
SREBF1-202ENST00000355815 PRNTQ86SH4 94 aa11.86□□□□□ -0.51
SREBF1-202ENST00000355815 OR4S2Q8NH73 311 aa11.86□□□□□ -0.51
SREBF1-202ENST00000355815 NDFIP1Q9BT67 221 aa11.86□□□□□ -0.51
SREBF1-202ENST00000355815 J3QR06 171 aa11.86□□□□□ -0.51
SREBF1-202ENST00000355815 CSRP1P21291 193 aaKnown RBP11.86□□□□□ -0.51
SREBF1-202ENST00000355815 CCL1P22362 96 aa11.86□□□□□ -0.51
SREBF1-202ENST00000355815 REPIN1Q9BWE0 567 aaKnown RBP11.86□□□□□ -0.51
SREBF1-202ENST00000355815 SSBP4Q9BWG4 385 aaPredicted RBP11.86□□□□□ -0.51
SREBF1-202ENST00000355815 PRDM13Q9H4Q3 707 aa11.86□□□□□ -0.51
SREBF1-202ENST00000355815 NTN3O00634 580 aaPredicted RBP11.86□□□□□ -0.51
SREBF1-202ENST00000355815 LHFPL1Q86WI0 220 aa11.86□□□□□ -0.51
SREBF1-202ENST00000355815 GMPPAQ96IJ6 420 aaPredicted RBP11.86□□□□□ -0.51
SREBF1-202ENST00000355815 DIRC2Q96SL1 478 aa11.86□□□□□ -0.51
SREBF1-202ENST00000355815 RNASE7Q9H1E1 156 aaKnown RBP11.86□□□□□ -0.51
SREBF1-202ENST00000355815 A8MWP6 167 aa11.85□□□□□ -0.51
SREBF1-202ENST00000355815 LHX2P50458 406 aa11.85□□□□□ -0.51
SREBF1-202ENST00000355815 ADTRPQ96IZ2 230 aa11.85□□□□□ -0.51
SREBF1-202ENST00000355815 ZNF430Q9H8G1 570 aaPredicted RBP11.85□□□□□ -0.51
SREBF1-202ENST00000355815 ARHGAP21Q5T5U3 1957 aa11.85□□□□□ -0.51
SREBF1-202ENST00000355815 EML6Q6ZMW3 1958 aa11.85□□□□□ -0.51
SREBF1-202ENST00000355815 H3BUT2 72 aa11.85□□□□□ -0.51
SREBF1-202ENST00000355815 CA1P00915 261 aaPredicted RBP11.85□□□□□ -0.51
SREBF1-202ENST00000355815 CGAP01215 116 aa11.85□□□□□ -0.51
SREBF1-202ENST00000355815 HBZP02008 142 aa11.85□□□□□ -0.51
SREBF1-202ENST00000355815 ORM1P02763 201 aa11.85□□□□□ -0.51
SREBF1-202ENST00000355815 GATA2P23769 480 aaPredicted RBP11.85□□□□□ -0.51
SREBF1-202ENST00000355815 FAM222BQ8WU58 562 aa11.85□□□□□ -0.51
SREBF1-202ENST00000355815 CCL17Q92583 94 aa11.85□□□□□ -0.51
SREBF1-202ENST00000355815 PRDM14Q9GZV8 571 aa11.85□□□□□ -0.51
SREBF1-202ENST00000355815 hADV38S2A0JD32 116 aa11.85□□□□□ -0.51
SREBF1-202ENST00000355815 PGPA6NDG6 321 aa11.85□□□□□ -0.51
SREBF1-202ENST00000355815 CRYABP02511 175 aaKnown RBP11.85□□□□□ -0.51
SREBF1-202ENST00000355815 SMAGPQ0VAQ4 97 aa11.85□□□□□ -0.51
SREBF1-202ENST00000355815 AAMDCQ9H7C9 122 aa11.85□□□□□ -0.51
SREBF1-202ENST00000355815 NDUFS8O00217 210 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 LINC00205P59089 165 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 UNQ6494/PRO21346Q6UXR6 183 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 KLF14Q8TD94 323 aaPredicted RBP11.84□□□□□ -0.51
SREBF1-202ENST00000355815 NUDT11Q96G61 164 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 FBLN5Q9UBX5 448 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 CACNA1AO00555 2505 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.84□□□□□ -0.51
SREBF1-202ENST00000355815 LINC00869P0C866 280 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 CLDN18P56856 261 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 CCL8P80075 99 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 C10orf113Q5VZT2 155 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 DRAM1Q8N682 238 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 C18orf15Q96N68 181 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 PAXXQ9BUH6 204 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 CRIM1Q9NZV1 1036 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 WDFY4Q6ZS81 3184 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 ARFGEF3Q5TH69 2177 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 HLA-DRB1P01911 266 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 CYC1P08574 325 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 LCN2P80188 198 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 AMMECR1LQ6DCA0 310 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 FAM214BQ7L5A3 538 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 SMIM12Q96EX1 92 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 TMEM70Q9BUB7 260 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 LPAR2Q9HBW0 351 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 OTOGLQ3ZCN5 2332 aa11.84□□□□□ -0.51
SREBF1-202ENST00000355815 CTSSP25774 331 aa11.83□□□□□ -0.51
SREBF1-202ENST00000355815 KLF3P57682 345 aaPredicted RBP11.83□□□□□ -0.51
SREBF1-202ENST00000355815 OR4F17Q8NGA8 305 aa11.83□□□□□ -0.51
SREBF1-202ENST00000355815 DERL1Q9BUN8 251 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms