RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 FAM110DQ8TAY7 271 aaPredicted RBP5.58□□□□□ -1.52
VPS13A-201ENST00000355766 MRAPQ8TCY5 172 aa5.58□□□□□ -1.52
VPS13A-201ENST00000355766 TCTEX1D2Q8WW35 142 aa5.58□□□□□ -1.52
VPS13A-201ENST00000355766 DCUN1D4Q92564 292 aa5.58□□□□□ -1.52
VPS13A-201ENST00000355766 C5orf30Q96GV9 206 aa5.58□□□□□ -1.52
VPS13A-201ENST00000355766 SEC22AQ96IW7 307 aa5.58□□□□□ -1.52
VPS13A-201ENST00000355766 ZNF251Q9BRH9 671 aa5.58□□□□□ -1.52
VPS13A-201ENST00000355766 RNF126Q9BV68 326 aa5.58□□□□□ -1.52
VPS13A-201ENST00000355766 MS4A7Q9GZW8 240 aaPredicted RBP5.58□□□□□ -1.52
VPS13A-201ENST00000355766 SLC25A31Q9H0C2 315 aa5.58□□□□□ -1.52
VPS13A-201ENST00000355766 TMEM133Q9H2Q1 129 aa5.58□□□□□ -1.52
VPS13A-201ENST00000355766 C11orf1Q9H5F2 150 aa5.58□□□□□ -1.52
VPS13A-201ENST00000355766 C1RLQ9NZP8 487 aa5.58□□□□□ -1.52
VPS13A-201ENST00000355766 GSKIPQ9P0R6 139 aa5.58□□□□□ -1.52
VPS13A-201ENST00000355766 RCL1Q9Y2P8 373 aaKnown RBP5.58□□□□□ -1.52
VPS13A-201ENST00000355766 KPTNQ9Y664 436 aa5.58□□□□□ -1.52
VPS13A-201ENST00000355766 DOCK11Q5JSL3 2073 aa5.58□□□□□ -1.52
VPS13A-201ENST00000355766 RYR2Q92736 4967 aa5.58□□□□□ -1.52
VPS13A-201ENST00000355766 MDFIC2A0A1B0GVS7 189 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 MPTX1A8MV57 137 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 OOSP1A8MZH6 123 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 H0YIZ8 118 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 J3QR06 171 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 M0R1X1 148 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 WRBO00258 174 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 FOXH1O75593 365 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 FCN3O75636 299 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 JTBO76095 146 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 HRASP01112 189 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 IGKV1-39P01597 117 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 IGKV1-5P01602 117 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 APOA2P02652 100 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 TFF1P04155 84 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 IGKV1D-39P04432 117 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 CRYBA1P05813 215 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 ELANEP08246 267 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 TPT1P13693 172 aaKnown RBP5.57□□□□□ -1.52
VPS13A-201ENST00000355766 RPL12P30050 165 aaKnown RBP5.57□□□□□ -1.52
VPS13A-201ENST00000355766 MC5RP33032 325 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 PRRX1P54821 245 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 S100A10P60903 97 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 GNB2P62879 340 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 ZNF266Q14584 549 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 LRRC37A5PQ49AS3 106 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 PRAMEF5Q5TYX0 476 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 NCR3LG1Q68D85 454 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 LYPD2Q6UXB3 125 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 PDPNQ86YL7 162 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 ODF3L1Q8IXM7 274 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 FGFRL1Q8N441 504 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 UBAC2Q8NBM4 344 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 ZNF680Q8NEM1 530 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 OR11H6Q8NGC7 330 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 OR4A5Q8NH83 315 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 OR1S1Q8NH92 325 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 VSTM2AQ8TAG5 236 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 SCARB1Q8WTV0 552 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 H1FXQ92522 213 aaKnown RBP5.57□□□□□ -1.52
VPS13A-201ENST00000355766 ST6GALNAC6Q969X2 333 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 RNF5Q99942 180 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 PLSCR3Q9NRY6 295 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.57□□□□□ -1.52
VPS13A-201ENST00000355766 HSPB7Q9UBY9 170 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 CACNG5Q9UF02 275 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 UBQLN2Q9UHD9 624 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 ZNF257Q9Y2Q1 563 aa5.57□□□□□ -1.52
VPS13A-201ENST00000355766 DNAH3Q8TD57 4116 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 IGHV3-43A0A0B4J1X8 118 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 LINC00473A8K010 186 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 SOX15O60248 233 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 PROP1O75360 226 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 S1PR2O95136 353 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 IGLV1-47P01700 117 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 PPIAL4GP0DN37 164 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 IGHV3-43DP0DP04 118 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 IGHV4-38-2P0DP08 117 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 LPAR6P43657 344 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 ZNF134P52741 427 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 PROK1P58294 105 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 RAB14P61106 215 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 RPL23AP62750 156 aaKnown RBP5.56□□□□□ -1.52
VPS13A-201ENST00000355766 VAMP2P63027 116 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 TNFRSF9Q07011 255 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 CLLU1Q5K131 121 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 H2BFWTQ7Z2G1 175 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 STX12Q86Y82 276 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 LYG1Q8N1E2 194 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 C11orf42Q8N5U0 333 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 OR2C3Q8N628 320 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 DMBX1Q8NFW5 382 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 OR4C13Q8NGP0 309 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 OR13D1Q8NGV5 346 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 OR10X1Q8NGY0 326 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 UBALD1Q8TB05 177 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 GPR146Q96CH1 333 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 SMIM8Q96KF7 97 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 CLEC7AQ9BXN2 247 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 PARD6GQ9BYG4 376 aaPredicted RBP5.56□□□□□ -1.52
VPS13A-201ENST00000355766 SLC25A32Q9H2D1 315 aa5.56□□□□□ -1.52
VPS13A-201ENST00000355766 MMP26Q9NRE1 261 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms