RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 TPTE2P1Q5T6R2 138 aa20.69■□□□□ 0.9
CLK2-201ENST00000355560 SP5Q6BEB4 398 aaPredicted RBP20.69■□□□□ 0.9
CLK2-201ENST00000355560 TREML4Q6UXN2 200 aa20.69■□□□□ 0.9
CLK2-201ENST00000355560 KIAA1456Q9P272 454 aa20.69■□□□□ 0.9
CLK2-201ENST00000355560 ASH1LQ9NR48 2969 aaKnown RBP20.69■□□□□ 0.9
CLK2-201ENST00000355560 E7EUB6 86 aa20.69■□□□□ 0.9
CLK2-201ENST00000355560 C17orf112F2Z3M2 114 aa20.69■□□□□ 0.9
CLK2-201ENST00000355560 C1orf122Q6ZSJ8 110 aa20.69■□□□□ 0.9
CLK2-201ENST00000355560 VMO1Q7Z5L0 202 aa20.69■□□□□ 0.9
CLK2-201ENST00000355560 DPM3Q9P2X0 92 aa20.69■□□□□ 0.9
CLK2-201ENST00000355560 CARHSP1Q9Y2V2 147 aaKnown RBP20.69■□□□□ 0.9
CLK2-201ENST00000355560 ODF3BA8MYP8 253 aa20.68■□□□□ 0.9
CLK2-201ENST00000355560 IGKV1D-33P01593 117 aa20.68■□□□□ 0.9
CLK2-201ENST00000355560 IGKV1-33P01594 117 aa20.68■□□□□ 0.9
CLK2-201ENST00000355560 PPT1P50897 306 aa20.68■□□□□ 0.9
CLK2-201ENST00000355560 SSX7Q7RTT5 188 aa20.68■□□□□ 0.9
CLK2-201ENST00000355560 CNTFRP26992 372 aa20.68■□□□□ 0.9
CLK2-201ENST00000355560 PDLIM4P50479 330 aa20.68■□□□□ 0.9
CLK2-201ENST00000355560 FFAR4Q5NUL3 377 aa20.68■□□□□ 0.9
CLK2-201ENST00000355560 ATRAIDQ6UW56 229 aa20.68■□□□□ 0.9
CLK2-201ENST00000355560 KPTNQ9Y664 436 aa20.68■□□□□ 0.9
CLK2-201ENST00000355560 MED13LQ71F56 2210 aa20.67■□□□□ 0.9
CLK2-201ENST00000355560 WNK2Q9Y3S1 2297 aa20.67■□□□□ 0.9
CLK2-201ENST00000355560 TRAV1-1A0A0B4J248 108 aa20.67■□□□□ 0.9
CLK2-201ENST00000355560 LMO4P61968 165 aa20.67■□□□□ 0.9
CLK2-201ENST00000355560 GUCA2BQ16661 112 aa20.67■□□□□ 0.9
CLK2-201ENST00000355560 ARSJQ5FYB0 599 aaPredicted RBP20.67■□□□□ 0.9
CLK2-201ENST00000355560 LCN15Q6UWW0 184 aa20.67■□□□□ 0.9
CLK2-201ENST00000355560 MPDU1O75352 247 aa20.66■□□□□ 0.9
CLK2-201ENST00000355560 PAX2Q02962 417 aa20.66■□□□□ 0.9
CLK2-201ENST00000355560 MRGPRG-AS1Q2M3A8 158 aa20.66■□□□□ 0.9
CLK2-201ENST00000355560 BSXQ3C1V8 233 aa20.66■□□□□ 0.9
CLK2-201ENST00000355560 LHFPL4Q7Z7J7 247 aa20.66■□□□□ 0.9
CLK2-201ENST00000355560 SVBPQ8N300 66 aa20.66■□□□□ 0.9
CLK2-201ENST00000355560 RPP25LQ8N5L8 163 aaKnown RBP20.66■□□□□ 0.9
CLK2-201ENST00000355560 TEX45Q8NA69 505 aa20.66■□□□□ 0.9
CLK2-201ENST00000355560 HILPDAQ9Y5L2 63 aa20.66■□□□□ 0.9
CLK2-201ENST00000355560 A0A1B0GW64 132 aa20.66■□□□□ 0.9
CLK2-201ENST00000355560 A0A1W2PN81 502 aa20.66■□□□□ 0.9
CLK2-201ENST00000355560 A0A1W2PRD5 423 aa20.66■□□□□ 0.9
CLK2-201ENST00000355560 A0A1W2PRF3 423 aa20.66■□□□□ 0.9
CLK2-201ENST00000355560 A0A1W2PRM7 423 aa20.66■□□□□ 0.9
CLK2-201ENST00000355560 CGB1A6NKQ9 187 aa20.66■□□□□ 0.9
CLK2-201ENST00000355560 TIMM23O14925 209 aa20.66■□□□□ 0.9
CLK2-201ENST00000355560 CHRNA7P36544 502 aa20.66■□□□□ 0.9
CLK2-201ENST00000355560 CEACAM3P40198 252 aa20.66■□□□□ 0.9
CLK2-201ENST00000355560 C2orf83Q53S99 150 aa20.66■□□□□ 0.9
CLK2-201ENST00000355560 ZNF787Q6DD87 383 aa20.66■□□□□ 0.9
CLK2-201ENST00000355560 RARRES2Q99969 163 aa20.66■□□□□ 0.9
CLK2-201ENST00000355560 UNKLQ9H9P5 680 aaKnown RBP20.66■□□□□ 0.9
CLK2-201ENST00000355560 IGHV2-70DA0A0C4DH43 119 aa20.65■□□□□ 0.9
CLK2-201ENST00000355560 MBP02144 154 aa20.65■□□□□ 0.9
CLK2-201ENST00000355560 RNASE2P10153 161 aaKnown RBP20.65■□□□□ 0.9
CLK2-201ENST00000355560 ERHP84090 104 aaKnown RBP20.65■□□□□ 0.9
CLK2-201ENST00000355560 MBD3L1Q8WWY6 194 aa20.65■□□□□ 0.9
CLK2-201ENST00000355560 NPVFQ9HCQ7 196 aa20.65■□□□□ 0.9
CLK2-201ENST00000355560 RBFOX3A6NFN3 312 aa20.65■□□□□ 0.9
CLK2-201ENST00000355560 INS-IGF2F8WCM5 200 aa20.65■□□□□ 0.9
CLK2-201ENST00000355560 ATP5IP56385 69 aaPredicted RBP20.65■□□□□ 0.9
CLK2-201ENST00000355560 PSG5Q15238 335 aa20.65■□□□□ 0.9
CLK2-201ENST00000355560 PLXNB1O43157 2135 aa20.64■□□□□ 0.9
CLK2-201ENST00000355560 FGF8P55075 233 aaPredicted RBP20.64■□□□□ 0.89
CLK2-201ENST00000355560 HAGHQ16775 308 aa20.64■□□□□ 0.89
CLK2-201ENST00000355560 OR10G4Q8NGN3 311 aa20.64■□□□□ 0.89
CLK2-201ENST00000355560 OR10G9Q8NGN4 311 aa20.64■□□□□ 0.89
CLK2-201ENST00000355560 OR10G7Q8NGN6 311 aa20.64■□□□□ 0.89
CLK2-201ENST00000355560 MGST2Q99735 147 aa20.64■□□□□ 0.89
CLK2-201ENST00000355560 SIRPDQ9H106 197 aa20.64■□□□□ 0.89
CLK2-201ENST00000355560 MAP1LC3B2A6NCE7 125 aa20.63■□□□□ 0.89
CLK2-201ENST00000355560 EIF3GO75821 320 aaKnown RBP eCLIP20.63■□□□□ 0.89
CLK2-201ENST00000355560 CRYGBP07316 175 aa20.63■□□□□ 0.89
CLK2-201ENST00000355560 HOXB4P17483 251 aaPredicted RBP20.63■□□□□ 0.89
CLK2-201ENST00000355560 WT1-ASQ06250 92 aa20.63■□□□□ 0.89
CLK2-201ENST00000355560 MMD2Q8IY49 270 aa20.63■□□□□ 0.89
CLK2-201ENST00000355560 MAP1LC3BQ9GZQ8 125 aa20.63■□□□□ 0.89
CLK2-201ENST00000355560 SLC25A22Q9H936 323 aa20.63■□□□□ 0.89
CLK2-201ENST00000355560 SIGLEC9Q9Y336 463 aa20.63■□□□□ 0.89
CLK2-201ENST00000355560 LSM4Q9Y4Z0 139 aaKnown RBP20.63■□□□□ 0.89
CLK2-201ENST00000355560 PRSS8Q16651 343 aa20.63■□□□□ 0.89
CLK2-201ENST00000355560 METTL1Q9UBP6 276 aaKnown RBP20.63■□□□□ 0.89
CLK2-201ENST00000355560 NAV3Q8IVL0 2385 aa20.62■□□□□ 0.89
CLK2-201ENST00000355560 ACTL6BO94805 426 aa20.62■□□□□ 0.89
CLK2-201ENST00000355560 VENTXO95231 258 aa20.62■□□□□ 0.89
CLK2-201ENST00000355560 SRSF1Q07955 248 aaKnown RBP eCLIP20.62■□□□□ 0.89
CLK2-201ENST00000355560 BTN1A1Q13410 526 aa20.62■□□□□ 0.89
CLK2-201ENST00000355560 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.62■□□□□ 0.89
CLK2-201ENST00000355560 GGTLC1Q9BX51 225 aa20.62■□□□□ 0.89
CLK2-201ENST00000355560 NKX6-2Q9C056 277 aaPredicted RBP20.62■□□□□ 0.89
CLK2-201ENST00000355560 SLC39A9Q9NUM3 307 aa20.62■□□□□ 0.89
CLK2-201ENST00000355560 M6PRP20645 277 aa20.62■□□□□ 0.89
CLK2-201ENST00000355560 PAX6P26367 422 aa20.62■□□□□ 0.89
CLK2-201ENST00000355560 TEPPQ6URK8 271 aa20.62■□□□□ 0.89
CLK2-201ENST00000355560 FAM168AQ92567 244 aa20.62■□□□□ 0.89
CLK2-201ENST00000355560 C1orf159Q96HA4 380 aa20.62■□□□□ 0.89
CLK2-201ENST00000355560 UBR5O95071 2799 aaPredicted RBP20.61■□□□□ 0.89
CLK2-201ENST00000355560 TNXAQ16473 311 aa20.61■□□□□ 0.89
CLK2-201ENST00000355560 CFHR4Q92496 578 aa20.61■□□□□ 0.89
CLK2-201ENST00000355560 RNF5Q99942 180 aa20.61■□□□□ 0.89
CLK2-201ENST00000355560 PIMREGQ9BSJ6 248 aa20.61■□□□□ 0.89
CLK2-201ENST00000355560 SMDT1Q9H4I9 107 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms