RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 IGKV1D-33P01593 117 aa12.6□□□□□ -0.39
LMX1B-201ENST00000355497 IGKV1-33P01594 117 aa12.6□□□□□ -0.39
LMX1B-201ENST00000355497 OR10J3Q5JRS4 329 aa12.6□□□□□ -0.39
LMX1B-201ENST00000355497 NHSQ6T4R5 1651 aa12.59□□□□□ -0.39
LMX1B-201ENST00000355497 FAM181AQ8N9Y4 354 aa12.59□□□□□ -0.39
LMX1B-201ENST00000355497 LOC101059948A0A1B0GTJ6 334 aa12.59□□□□□ -0.39
LMX1B-201ENST00000355497 SMAD7O15105 426 aaKnown RBP12.59□□□□□ -0.39
LMX1B-201ENST00000355497 SRP19P09132 144 aaKnown RBP12.59□□□□□ -0.39
LMX1B-201ENST00000355497 SAA1P0DJI8 122 aaPredicted RBP12.59□□□□□ -0.39
LMX1B-201ENST00000355497 ARPC1AQ92747 370 aa12.59□□□□□ -0.39
LMX1B-201ENST00000355497 C21orf62Q9NYP8 219 aa12.59□□□□□ -0.39
LMX1B-201ENST00000355497 CDK5RAP2Q96SN8 1893 aa12.59□□□□□ -0.39
LMX1B-201ENST00000355497 PGPEP1LA6NFU8 196 aa12.59□□□□□ -0.39
LMX1B-201ENST00000355497 PCOLCEQ15113 449 aa12.59□□□□□ -0.39
LMX1B-201ENST00000355497 GDF15Q99988 308 aa12.59□□□□□ -0.39
LMX1B-201ENST00000355497 C5orf30Q96GV9 206 aa12.59□□□□□ -0.39
LMX1B-201ENST00000355497 Q9H3A6 140 aa12.59□□□□□ -0.39
LMX1B-201ENST00000355497 ATP5G3P48201 142 aa12.58□□□□□ -0.4
LMX1B-201ENST00000355497 LINC01590Q5TEZ4 76 aa12.58□□□□□ -0.4
LMX1B-201ENST00000355497 A0A087WWC5 75 aa12.58□□□□□ -0.4
LMX1B-201ENST00000355497 SLC25A45Q8N413 288 aa12.58□□□□□ -0.4
LMX1B-201ENST00000355497 DPM3Q9P2X0 92 aa12.58□□□□□ -0.4
LMX1B-201ENST00000355497 SLC25A15Q9Y619 301 aa12.58□□□□□ -0.4
LMX1B-201ENST00000355497 C12orf77C9JDV5 145 aa12.58□□□□□ -0.4
LMX1B-201ENST00000355497 LINC00614P0C842 121 aa12.58□□□□□ -0.4
LMX1B-201ENST00000355497 CLEC19AQ6UXS0 136 aa12.57□□□□□ -0.4
LMX1B-201ENST00000355497 Q6ZT83 130 aa12.57□□□□□ -0.4
LMX1B-201ENST00000355497 LINC01560Q8TB33 94 aa12.57□□□□□ -0.4
LMX1B-201ENST00000355497 SAP25Q8TEE9 199 aa12.57□□□□□ -0.4
LMX1B-201ENST00000355497 TRGV2A0A075B6R0 118 aa12.57□□□□□ -0.4
LMX1B-201ENST00000355497 C4orf51C9J302 202 aa12.57□□□□□ -0.4
LMX1B-201ENST00000355497 H3BUT2 72 aa12.57□□□□□ -0.4
LMX1B-201ENST00000355497 FAM71F2Q6NXP2 309 aa12.57□□□□□ -0.4
LMX1B-201ENST00000355497 MIR17HGQ75NE6 70 aa12.57□□□□□ -0.4
LMX1B-201ENST00000355497 SP7Q8TDD2 431 aaPredicted RBP12.57□□□□□ -0.4
LMX1B-201ENST00000355497 TM2D1Q9BX74 207 aa12.57□□□□□ -0.4
LMX1B-201ENST00000355497 ARAP2Q8WZ64 1704 aa12.57□□□□□ -0.4
LMX1B-201ENST00000355497 IGKV3D-20A0A0C4DH25 116 aa12.57□□□□□ -0.4
LMX1B-201ENST00000355497 FAM19A2Q8N3H0 131 aa12.57□□□□□ -0.4
LMX1B-201ENST00000355497 CACNA1CQ13936 2221 aa12.57□□□□□ -0.4
LMX1B-201ENST00000355497 PRR19A6NJB7 356 aa12.57□□□□□ -0.4
LMX1B-201ENST00000355497 C17orf98A8MV24 154 aa12.57□□□□□ -0.4
LMX1B-201ENST00000355497 OTORQ9NRC9 128 aa12.57□□□□□ -0.4
LMX1B-201ENST00000355497 YAE1D1Q9NRH1 226 aa12.57□□□□□ -0.4
LMX1B-201ENST00000355497 GSN-AS1Q9NRJ2 163 aa12.57□□□□□ -0.4
LMX1B-201ENST00000355497 FOXD3Q9UJU5 478 aaPredicted RBP12.57□□□□□ -0.4
LMX1B-201ENST00000355497 BCORQ6W2J9 1755 aa12.56□□□□□ -0.4
LMX1B-201ENST00000355497 NPIPB13A6NJU9 1138 aa12.56□□□□□ -0.4
LMX1B-201ENST00000355497 TMEM42Q69YG0 159 aa12.56□□□□□ -0.4
LMX1B-201ENST00000355497 ST20Q9HBF5 79 aa12.56□□□□□ -0.4
LMX1B-201ENST00000355497 ZNF688P0C7X2 276 aa12.56□□□□□ -0.4
LMX1B-201ENST00000355497 ATP1A1-AS1Q5TC04 95 aa12.56□□□□□ -0.4
LMX1B-201ENST00000355497 OR4X2Q8NGF9 303 aa12.56□□□□□ -0.4
LMX1B-201ENST00000355497 PEMTQ9UBM1 199 aa12.56□□□□□ -0.4
LMX1B-201ENST00000355497 PILRBQ9UKJ0 227 aa12.56□□□□□ -0.4
LMX1B-201ENST00000355497 HTN3P15516 51 aa12.56□□□□□ -0.4
LMX1B-201ENST00000355497 PRDM13Q9H4Q3 707 aa12.56□□□□□ -0.4
LMX1B-201ENST00000355497 SMIM10L1P0DMW3 83 aa12.55□□□□□ -0.4
LMX1B-201ENST00000355497 IFI27P40305 119 aaPredicted RBP12.55□□□□□ -0.4
LMX1B-201ENST00000355497 SMIM10Q96HG1 83 aa12.55□□□□□ -0.4
LMX1B-201ENST00000355497 GLRXP35754 106 aa12.55□□□□□ -0.4
LMX1B-201ENST00000355497 ZP1P60852 638 aa12.55□□□□□ -0.4
LMX1B-201ENST00000355497 TIMM23BQ5SRD1 257 aa12.55□□□□□ -0.4
LMX1B-201ENST00000355497 CDK2AP2O75956 126 aa12.55□□□□□ -0.4
LMX1B-201ENST00000355497 SRSF4Q08170 494 aaKnown RBP12.55□□□□□ -0.4
LMX1B-201ENST00000355497 HIGD1CA8MV81 97 aa12.55□□□□□ -0.4
LMX1B-201ENST00000355497 EFEMP2O95967 443 aa12.55□□□□□ -0.4
LMX1B-201ENST00000355497 MEGF9Q9H1U4 602 aa12.55□□□□□ -0.4
LMX1B-201ENST00000355497 ZNF257Q9Y2Q1 563 aa12.55□□□□□ -0.4
LMX1B-201ENST00000355497 ZNF831Q5JPB2 1677 aa12.54□□□□□ -0.4
LMX1B-201ENST00000355497 KBTBD11-OT1A0A1B0GTJ5 212 aa12.54□□□□□ -0.4
LMX1B-201ENST00000355497 IGLV3-21P80748 117 aaPredicted RBP12.54□□□□□ -0.4
LMX1B-201ENST00000355497 CACNG8Q8WXS5 425 aa12.54□□□□□ -0.4
LMX1B-201ENST00000355497 SLC25A2Q9BXI2 301 aa12.54□□□□□ -0.4
LMX1B-201ENST00000355497 MRPL20Q9BYC9 149 aaKnown RBP12.54□□□□□ -0.4
LMX1B-201ENST00000355497 FNDC4Q9H6D8 234 aaPredicted RBP12.54□□□□□ -0.4
LMX1B-201ENST00000355497 ZNF703Q9H7S9 590 aaPredicted RBP12.54□□□□□ -0.4
LMX1B-201ENST00000355497 MSGN1A6NI15 193 aa12.54□□□□□ -0.4
LMX1B-201ENST00000355497 RIPPLY3P57055 190 aa12.54□□□□□ -0.4
LMX1B-201ENST00000355497 OR13A1Q8NGR1 328 aa12.54□□□□□ -0.4
LMX1B-201ENST00000355497 CTHRC1Q96CG8 243 aa12.54□□□□□ -0.4
LMX1B-201ENST00000355497 ZNF646O15015 1829 aaPredicted RBP12.54□□□□□ -0.4
LMX1B-201ENST00000355497 NEU4Q8WWR8 484 aaPredicted RBP12.54□□□□□ -0.4
LMX1B-201ENST00000355497 UCP1P25874 307 aa12.54□□□□□ -0.4
LMX1B-201ENST00000355497 EGR4Q05215 589 aa12.54□□□□□ -0.4
LMX1B-201ENST00000355497 NDUFS8O00217 210 aa12.54□□□□□ -0.4
LMX1B-201ENST00000355497 RNF182Q8N6D2 247 aa12.54□□□□□ -0.4
LMX1B-201ENST00000355497 RTBDNQ9BSG5 229 aaPredicted RBP12.54□□□□□ -0.4
LMX1B-201ENST00000355497 LAMTOR2Q9Y2Q5 125 aa12.54□□□□□ -0.4
LMX1B-201ENST00000355497 C1QL2Q7Z5L3 287 aa12.53□□□□□ -0.4
LMX1B-201ENST00000355497 PROB1E7EW31 1015 aa12.53□□□□□ -0.4
LMX1B-201ENST00000355497 MESP2Q0VG99 397 aa12.53□□□□□ -0.4
LMX1B-201ENST00000355497 SRSF6Q13247 344 aaKnown RBP12.53□□□□□ -0.4
LMX1B-201ENST00000355497 SIGMAR1Q99720 223 aa12.53□□□□□ -0.4
LMX1B-201ENST00000355497 GP6Q9HCN6 339 aa12.53□□□□□ -0.4
LMX1B-201ENST00000355497 NRN1Q9NPD7 142 aa12.53□□□□□ -0.4
LMX1B-201ENST00000355497 NHP2Q9NX24 153 aaKnown RBP12.53□□□□□ -0.4
LMX1B-201ENST00000355497 HOXA3O43365 443 aaPredicted RBP12.53□□□□□ -0.4
LMX1B-201ENST00000355497 SERF1AO75920 110 aa12.53□□□□□ -0.4
LMX1B-201ENST00000355497 ADMP35318 185 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms