RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 MFSD2BA6NFX1 497 aa11.88□□□□□ -0.51
PDGFA-201ENST00000354513 GSTZ1O43708 216 aaPredicted RBP11.88□□□□□ -0.51
PDGFA-201ENST00000354513 CTXN2P0C2S0 81 aa11.88□□□□□ -0.51
PDGFA-201ENST00000354513 PSMB6P28072 239 aa11.88□□□□□ -0.51
PDGFA-201ENST00000354513 RCVRNP35243 200 aa11.88□□□□□ -0.51
PDGFA-201ENST00000354513 GUCA2BQ16661 112 aa11.88□□□□□ -0.51
PDGFA-201ENST00000354513 CLEC19AQ6UXS0 136 aa11.88□□□□□ -0.51
PDGFA-201ENST00000354513 SLC25A42Q86VD7 318 aa11.88□□□□□ -0.51
PDGFA-201ENST00000354513 GPHB5Q86YW7 130 aa11.88□□□□□ -0.51
PDGFA-201ENST00000354513 MFSD4AQ8N468 514 aa11.88□□□□□ -0.51
PDGFA-201ENST00000354513 S100ZQ8WXG8 99 aa11.88□□□□□ -0.51
PDGFA-201ENST00000354513 TAS2R8Q9NYW2 309 aa11.88□□□□□ -0.51
PDGFA-201ENST00000354513 TECRQ9NZ01 308 aaKnown RBP11.88□□□□□ -0.51
PDGFA-201ENST00000354513 KLK11Q9UBX7 282 aa11.88□□□□□ -0.51
PDGFA-201ENST00000354513 MTFP1Q9UDX5 166 aa11.88□□□□□ -0.51
PDGFA-201ENST00000354513 ANAPC10Q9UM13 185 aa11.88□□□□□ -0.51
PDGFA-201ENST00000354513 IGLV11-55A0A075B6I3 123 aa11.87□□□□□ -0.51
PDGFA-201ENST00000354513 SLC22A5O76082 557 aa11.87□□□□□ -0.51
PDGFA-201ENST00000354513 REG1AP05451 166 aa11.87□□□□□ -0.51
PDGFA-201ENST00000354513 NAT1P18440 290 aa11.87□□□□□ -0.51
PDGFA-201ENST00000354513 CBLN1P23435 193 aa11.87□□□□□ -0.51
PDGFA-201ENST00000354513 MAS1LP35410 378 aa11.87□□□□□ -0.51
PDGFA-201ENST00000354513 ARL3P36405 182 aa11.87□□□□□ -0.51
PDGFA-201ENST00000354513 ARPC4P59998 168 aa11.87□□□□□ -0.51
PDGFA-201ENST00000354513 UNQ9165/PRO28630Q6UXU0 137 aa11.87□□□□□ -0.51
PDGFA-201ENST00000354513 SSX9Q7RTT3 188 aa11.87□□□□□ -0.51
PDGFA-201ENST00000354513 SRRQ9GZT4 340 aa11.87□□□□□ -0.51
PDGFA-201ENST00000354513 FAM209BQ5JX69 171 aa11.86□□□□□ -0.51
PDGFA-201ENST00000354513 OR4A47Q6IF82 309 aa11.86□□□□□ -0.51
PDGFA-201ENST00000354513 ZNF66Q6ZN08 573 aa11.86□□□□□ -0.51
PDGFA-201ENST00000354513 GDPD1Q8N9F7 314 aa11.86□□□□□ -0.51
PDGFA-201ENST00000354513 VSTM2AQ8TAG5 236 aa11.86□□□□□ -0.51
PDGFA-201ENST00000354513 CCL28Q9NRJ3 127 aa11.86□□□□□ -0.51
PDGFA-201ENST00000354513 TRAV3A0A0B4J244 114 aa11.86□□□□□ -0.51
PDGFA-201ENST00000354513 TNFSF12O43508 249 aa11.86□□□□□ -0.51
PDGFA-201ENST00000354513 HLA-DMAP28067 261 aa11.86□□□□□ -0.51
PDGFA-201ENST00000354513 SSBP1Q04837 148 aaKnown RBP11.86□□□□□ -0.51
PDGFA-201ENST00000354513 LYSMD2Q8IV50 215 aa11.86□□□□□ -0.51
PDGFA-201ENST00000354513 OR5AP2Q8NGF4 316 aa11.86□□□□□ -0.51
PDGFA-201ENST00000354513 OR5H2Q8NGV7 314 aa11.86□□□□□ -0.51
PDGFA-201ENST00000354513 WDR12Q9GZL7 423 aaKnown RBP11.86□□□□□ -0.51
PDGFA-201ENST00000354513 BET1LQ9NYM9 111 aa11.86□□□□□ -0.51
PDGFA-201ENST00000354513 KMT2AQ03164 3969 aa11.85□□□□□ -0.51
PDGFA-201ENST00000354513 IGLC7A0M8Q6 106 aa11.85□□□□□ -0.51
PDGFA-201ENST00000354513 JTBO76095 146 aa11.85□□□□□ -0.51
PDGFA-201ENST00000354513 PMP2P02689 132 aa11.85□□□□□ -0.51
PDGFA-201ENST00000354513 HLA-GP17693 338 aa11.85□□□□□ -0.51
PDGFA-201ENST00000354513 TAS2R46P59540 309 aa11.85□□□□□ -0.51
PDGFA-201ENST00000354513 OR2B8PP59922 312 aa11.85□□□□□ -0.51
PDGFA-201ENST00000354513 RPL8P62917 257 aaKnown RBP11.85□□□□□ -0.51
PDGFA-201ENST00000354513 ZNF846Q147U1 533 aa11.85□□□□□ -0.51
PDGFA-201ENST00000354513 MSMO1Q15800 293 aa11.85□□□□□ -0.51
PDGFA-201ENST00000354513 TM4SF20Q53R12 229 aa11.85□□□□□ -0.51
PDGFA-201ENST00000354513 BTNL8Q6UX41 500 aa11.85□□□□□ -0.51
PDGFA-201ENST00000354513 UXS1Q8NBZ7 420 aa11.85□□□□□ -0.51
PDGFA-201ENST00000354513 SECTM1Q8WVN6 248 aa11.85□□□□□ -0.51
PDGFA-201ENST00000354513 EEF1AKMT3Q96AZ1 226 aa11.85□□□□□ -0.51
PDGFA-201ENST00000354513 SDHCQ99643 169 aaPredicted RBP11.85□□□□□ -0.51
PDGFA-201ENST00000354513 OVOL2Q9BRP0 275 aa11.85□□□□□ -0.51
PDGFA-201ENST00000354513 C8orf88P0DMB2 117 aa11.84□□□□□ -0.51
PDGFA-201ENST00000354513 HRH1P35367 487 aa11.84□□□□□ -0.51
PDGFA-201ENST00000354513 TAS2R19P59542 299 aa11.84□□□□□ -0.51
PDGFA-201ENST00000354513 EWSR1Q01844 656 aaKnown RBP eCLIP11.84□□□□□ -0.51
PDGFA-201ENST00000354513 POU2AF1Q16633 256 aa11.84□□□□□ -0.51
PDGFA-201ENST00000354513 ZNF57Q68EA5 555 aaPredicted RBP11.84□□□□□ -0.51
PDGFA-201ENST00000354513 TMEM229BQ8NBD8 167 aa11.84□□□□□ -0.51
PDGFA-201ENST00000354513 ZNF414Q96IQ9 312 aa11.84□□□□□ -0.51
PDGFA-201ENST00000354513 EHFQ9NZC4 300 aa11.84□□□□□ -0.51
PDGFA-201ENST00000354513 DNAH10Q8IVF4 4471 aa11.84□□□□□ -0.51
PDGFA-201ENST00000354513 M0QYG6 137 aa11.83□□□□□ -0.52
PDGFA-201ENST00000354513 SCAF4O95104 1147 aaKnown RBP11.83□□□□□ -0.52
PDGFA-201ENST00000354513 HRASP01112 189 aa11.83□□□□□ -0.52
PDGFA-201ENST00000354513 PPYP01298 95 aa11.83□□□□□ -0.52
PDGFA-201ENST00000354513 CD3DP04234 171 aa11.83□□□□□ -0.52
PDGFA-201ENST00000354513 HIST1H1BP16401 226 aaKnown RBP11.83□□□□□ -0.52
PDGFA-201ENST00000354513 FCGR2CP31995 323 aa11.83□□□□□ -0.52
PDGFA-201ENST00000354513 RFX2P48378 723 aa11.83□□□□□ -0.52
PDGFA-201ENST00000354513 INPP1P49441 399 aa11.83□□□□□ -0.52
PDGFA-201ENST00000354513 PPP5CP53041 499 aa11.83□□□□□ -0.52
PDGFA-201ENST00000354513 BAK1Q16611 211 aa11.83□□□□□ -0.52
PDGFA-201ENST00000354513 TRIQKQ629K1 86 aa11.83□□□□□ -0.52
PDGFA-201ENST00000354513 SPAG16Q8N0X2 631 aa11.83□□□□□ -0.52
PDGFA-201ENST00000354513 IL17DQ8TAD2 202 aa11.83□□□□□ -0.52
PDGFA-201ENST00000354513 ZNF502Q8TBZ5 544 aa11.83□□□□□ -0.52
PDGFA-201ENST00000354513 TRIM63Q969Q1 353 aa11.83□□□□□ -0.52
PDGFA-201ENST00000354513 ANKRD20A5PA0PJZ0 165 aa11.82□□□□□ -0.52
PDGFA-201ENST00000354513 ZNF320A2RRD8 509 aa11.82□□□□□ -0.52
PDGFA-201ENST00000354513 UPK2O00526 184 aa11.82□□□□□ -0.52
PDGFA-201ENST00000354513 RBFOX2O43251 390 aaKnown RBP eCLIP11.82□□□□□ -0.52
PDGFA-201ENST00000354513 RAB3DO95716 219 aa11.82□□□□□ -0.52
PDGFA-201ENST00000354513 TBPP20226 339 aa11.82□□□□□ -0.52
PDGFA-201ENST00000354513 GPR183P32249 361 aa11.82□□□□□ -0.52
PDGFA-201ENST00000354513 RNASE10Q5GAN6 216 aaKnown RBP11.82□□□□□ -0.52
PDGFA-201ENST00000354513 STEAP1BQ6NZ63 245 aa11.82□□□□□ -0.52
PDGFA-201ENST00000354513 TOMM5Q8N4H5 51 aa11.82□□□□□ -0.52
PDGFA-201ENST00000354513 OR10W1Q8NGF6 305 aa11.82□□□□□ -0.52
PDGFA-201ENST00000354513 OR52B4Q8NGK2 314 aa11.82□□□□□ -0.52
PDGFA-201ENST00000354513 OR4A5Q8NH83 315 aa11.82□□□□□ -0.52
PDGFA-201ENST00000354513 TSC22D3Q99576 134 aa11.82□□□□□ -0.52
PDGFA-201ENST00000354513 CCDC32Q9BV29 185 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms