RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 SPACA3Q8IXA5 215 aa8.55□□□□□ -1.04
CHRNA1-202ENST00000348749 FAM216AQ8WUB2 273 aa8.55□□□□□ -1.04
CHRNA1-202ENST00000348749 NANOS1Q8WY41 292 aaKnown RBP8.55□□□□□ -1.04
CHRNA1-202ENST00000348749 C5orf30Q96GV9 206 aa8.55□□□□□ -1.04
CHRNA1-202ENST00000348749 ZNF488Q96MN9 340 aa8.55□□□□□ -1.04
CHRNA1-202ENST00000348749 TAAR6Q96RI8 345 aa8.55□□□□□ -1.04
CHRNA1-202ENST00000348749 FAM173AQ9BQD7 235 aa8.55□□□□□ -1.04
CHRNA1-202ENST00000348749 TMEM70Q9BUB7 260 aa8.55□□□□□ -1.04
CHRNA1-202ENST00000348749 PRRG4Q9BZD6 226 aa8.55□□□□□ -1.04
CHRNA1-202ENST00000348749 RNASE7Q9H1E1 156 aaKnown RBP8.55□□□□□ -1.04
CHRNA1-202ENST00000348749 ZNF331Q9NQX6 463 aaPredicted RBP8.55□□□□□ -1.04
CHRNA1-202ENST00000348749 TECRQ9NZ01 308 aaKnown RBP8.55□□□□□ -1.04
CHRNA1-202ENST00000348749 PEF1Q9UBV8 284 aaKnown RBP8.55□□□□□ -1.04
CHRNA1-202ENST00000348749 MUC21A0A0G2JKD1 596 aa8.54□□□□□ -1.04
CHRNA1-202ENST00000348749 MUC21A0A140T8X8 626 aa8.54□□□□□ -1.04
CHRNA1-202ENST00000348749 C17orf98A8MV24 154 aa8.54□□□□□ -1.04
CHRNA1-202ENST00000348749 CGAP01215 116 aa8.54□□□□□ -1.04
CHRNA1-202ENST00000348749 EFNB3Q15768 340 aa8.54□□□□□ -1.04
CHRNA1-202ENST00000348749 SMIM21Q3B7S5 101 aa8.54□□□□□ -1.04
CHRNA1-202ENST00000348749 TIGITQ495A1 244 aa8.54□□□□□ -1.04
CHRNA1-202ENST00000348749 MUC21Q5SSG8 566 aa8.54□□□□□ -1.04
CHRNA1-202ENST00000348749 FAM162BQ5T6X4 162 aa8.54□□□□□ -1.04
CHRNA1-202ENST00000348749 PQLC2Q6ZP29 291 aa8.54□□□□□ -1.04
CHRNA1-202ENST00000348749 SPATA12Q7Z6I5 190 aa8.54□□□□□ -1.04
CHRNA1-202ENST00000348749 DOLPP1Q86YN1 238 aa8.54□□□□□ -1.04
CHRNA1-202ENST00000348749 SLC25A40Q8TBP6 338 aa8.54□□□□□ -1.04
CHRNA1-202ENST00000348749 COMMD5Q9GZQ3 224 aa8.54□□□□□ -1.04
CHRNA1-202ENST00000348749 MS4A5Q9H3V2 200 aa8.54□□□□□ -1.04
CHRNA1-202ENST00000348749 ZNF430Q9H8G1 570 aaPredicted RBP8.54□□□□□ -1.04
CHRNA1-202ENST00000348749 TNFRSF19Q9NS68 423 aa8.54□□□□□ -1.04
CHRNA1-202ENST00000348749 PILRBQ9UKJ0 227 aa8.54□□□□□ -1.04
CHRNA1-202ENST00000348749 OR4C46A6NHA9 309 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 OR2J3O76001 311 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 CELA3BP08861 270 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 CRYBB3P26998 211 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 CA7P43166 264 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 SLC35B1P78383 322 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 PAX2Q02962 417 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 FXYD3Q14802 87 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 SPINK9Q5DT21 86 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 RNFT1Q5M7Z0 435 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 OR4S2Q8NH73 311 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 TNFRSF14Q92956 283 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 SLC25A10Q9UBX3 287 aaPredicted RBP8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 LSM4Q9Y4Z0 139 aaKnown RBP8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 SDK2Q58EX2 2172 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 SPTBN5Q9NRC6 3674 aaKnown RBP8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 TTC28Q96AY4 2481 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 TRAV8-6A0A0B4J262 113 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 FAM90A9PA6NNJ1 464 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 G3V4G9 280 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 RBMXL2O75526 392 aaKnown RBP8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 OR2H2O95918 312 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 NGFP01138 241 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 IGLV2-8P01709 118 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 TCL1AP56279 114 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 Q0VFX4 171 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 GABRA6Q16445 453 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 IBA57Q5T440 356 aaKnown RBP8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 GP6Q9HCN6 339 aa8.53□□□□□ -1.04
CHRNA1-202ENST00000348749 A0A096LPE4 126 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 A0A1W2PPZ6 126 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 TMEM30CPA0ZSE6 113 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 IGHV3-9P01782 118 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 CCL4P13236 92 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 RIPPLY3P57055 190 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 HIST1H1AQ02539 215 aaPredicted RBP8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 FAM120AOSQ5T036 256 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 SPATA31B1PQ5VZV4 182 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 PMS2CLQ68D20 193 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 UFSP1Q6NVU6 142 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 SLC23A3Q6PIS1 610 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 TUSC5Q8IXB3 177 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 FER1L6-AS1Q8NA97 138 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 IGF2BP2-AS1Q96M15 143 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 SCRT2Q9NQ03 307 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 TMEM167BQ9NRX6 74 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 C9orf172C9J069 976 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 SAP30O75446 220 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 FOXH1O75593 365 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 CA6P23280 308 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 C1orf185Q5T7R7 199 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 SLC35E4Q6ICL7 350 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 RNASEKQ6P5S7 137 aaKnown RBP8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 UBALD1Q8TB05 177 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 ST6GALNAC6Q969X2 333 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 GALMQ96C23 342 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 C1orf159Q96HA4 380 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 MS4A6AQ9H2W1 248 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 NPVFQ9HCQ7 196 aa8.52□□□□□ -1.05
CHRNA1-202ENST00000348749 PINLYPA6NC86 204 aa8.51□□□□□ -1.05
CHRNA1-202ENST00000348749 ZNF503-AS2A6NEH8 195 aa8.51□□□□□ -1.05
CHRNA1-202ENST00000348749 OOEPA6NGQ2 149 aa8.51□□□□□ -1.05
CHRNA1-202ENST00000348749 C21orf140B9A014 251 aa8.51□□□□□ -1.05
CHRNA1-202ENST00000348749 CCL2P13500 99 aa8.51□□□□□ -1.05
CHRNA1-202ENST00000348749 GATA2P23769 480 aaPredicted RBP8.51□□□□□ -1.05
CHRNA1-202ENST00000348749 OTX2P32243 289 aa8.51□□□□□ -1.05
CHRNA1-202ENST00000348749 VDAC2P45880 294 aaPredicted RBP8.51□□□□□ -1.05
CHRNA1-202ENST00000348749 PPOXP50336 477 aa8.51□□□□□ -1.05
CHRNA1-202ENST00000348749 MRPL49Q13405 166 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms