RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 LSM5Q9Y4Y9 91 aaKnown RBP15□□□□□ -0.01
CHMP4A-201ENST00000347519 FAM181BA6NEQ2 426 aa14.99□□□□□ -0.01
CHMP4A-201ENST00000347519 RNASE1P07998 156 aaKnown RBP14.99□□□□□ -0.01
CHMP4A-201ENST00000347519 S100A10P60903 97 aa14.99□□□□□ -0.01
CHMP4A-201ENST00000347519 PRCDQ00LT1 54 aa14.99□□□□□ -0.01
CHMP4A-201ENST00000347519 PDLIM3Q53GG5 364 aaPredicted RBP14.99□□□□□ -0.01
CHMP4A-201ENST00000347519 OR5B3Q8NH48 314 aa14.99□□□□□ -0.01
CHMP4A-201ENST00000347519 ARPC1AQ92747 370 aa14.99□□□□□ -0.01
CHMP4A-201ENST00000347519 C11orf1Q9H5F2 150 aa14.99□□□□□ -0.01
CHMP4A-201ENST00000347519 ZNF702PQ9H963 129 aa14.99□□□□□ -0.01
CHMP4A-201ENST00000347519 MSGN1A6NI15 193 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 FAM90A26D6RGX4 464 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 ATP6V0E1O15342 81 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 ACTL6BO94805 426 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 TMEM50AO95807 157 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 IAPPP10997 89 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 VDAC2P45880 294 aaPredicted RBP14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 RAP2BP61225 183 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 CYCSP99999 105 aaKnown RBP14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 TMEM95Q3KNT9 176 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 ASPHD1Q5U4P2 390 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 AKAP14Q86UN6 197 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 RNF126Q9BV68 326 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 PARP11Q9NR21 331 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 OR5AC2Q9NZP5 309 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 IGLC7A0M8Q6 106 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 CEBPZOSA8MTT3 80 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 SYNGR2O43760 224 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 SSSCA1O60232 199 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 MPC2O95563 127 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 IGHG2P01859 326 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 AREGP15514 252 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 PSMB6P28072 239 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 PAX9P55771 341 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 C19orf35Q6ZS72 473 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 OR2T35Q8NGX2 323 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 LINC00527Q9UJ94 153 aa14.98□□□□□ -0.01
CHMP4A-201ENST00000347519 WRBO00258 174 aa14.97□□□□□ -0.01
CHMP4A-201ENST00000347519 TCF21O43680 179 aa14.97□□□□□ -0.01
CHMP4A-201ENST00000347519 REG1AP05451 166 aa14.97□□□□□ -0.01
CHMP4A-201ENST00000347519 WT1-ASQ06250 92 aa14.97□□□□□ -0.01
CHMP4A-201ENST00000347519 DTD1Q8TEA8 209 aa14.97□□□□□ -0.01
CHMP4A-201ENST00000347519 ABHD5Q8WTS1 349 aa14.97□□□□□ -0.01
CHMP4A-201ENST00000347519 NPFFR1Q9GZQ6 430 aa14.97□□□□□ -0.01
CHMP4A-201ENST00000347519 TRIM77I1YAP6 450 aa14.96□□□□□ -0.02
CHMP4A-201ENST00000347519 HOXA1P49639 335 aaPredicted RBP14.96□□□□□ -0.02
CHMP4A-201ENST00000347519 SLC35E3Q7Z769 313 aa14.96□□□□□ -0.02
CHMP4A-201ENST00000347519 ASB13Q8WXK3 278 aa14.96□□□□□ -0.02
CHMP4A-201ENST00000347519 JMJD8Q96S16 334 aa14.96□□□□□ -0.02
CHMP4A-201ENST00000347519 PLEKHA3Q9HB20 300 aa14.96□□□□□ -0.02
CHMP4A-201ENST00000347519 WSB1Q9Y6I7 421 aa14.96□□□□□ -0.02
CHMP4A-201ENST00000347519 G3V318 75 aa14.95□□□□□ -0.02
CHMP4A-201ENST00000347519 KCNAB3O43448 404 aa14.95□□□□□ -0.02
CHMP4A-201ENST00000347519 DEDDO75618 318 aa14.95□□□□□ -0.02
CHMP4A-201ENST00000347519 Q6ZSV7 163 aa14.95□□□□□ -0.02
CHMP4A-201ENST00000347519 TCTE3Q8IZS6 198 aa14.95□□□□□ -0.02
CHMP4A-201ENST00000347519 LFNGQ8NES3 379 aa14.95□□□□□ -0.02
CHMP4A-201ENST00000347519 SGMS2Q8NHU3 365 aa14.95□□□□□ -0.02
CHMP4A-201ENST00000347519 NOL4LQ96MY1 436 aaPredicted RBP14.95□□□□□ -0.02
CHMP4A-201ENST00000347519 PRSS22Q9GZN4 317 aa14.95□□□□□ -0.02
CHMP4A-201ENST00000347519 MBD2Q9UBB5 411 aa14.95□□□□□ -0.02
CHMP4A-201ENST00000347519 MED6O75586 246 aa14.94□□□□□ -0.02
CHMP4A-201ENST00000347519 OR13C7P0DN81 318 aa14.94□□□□□ -0.02
CHMP4A-201ENST00000347519 C19orf54Q5BKX5 351 aa14.94□□□□□ -0.02
CHMP4A-201ENST00000347519 Q8N2B8 174 aa14.94□□□□□ -0.02
CHMP4A-201ENST00000347519 OR2C3Q8N628 320 aa14.94□□□□□ -0.02
CHMP4A-201ENST00000347519 OR11H4Q8NGC9 324 aa14.94□□□□□ -0.02
CHMP4A-201ENST00000347519 TMEM170AQ8WVE7 144 aa14.94□□□□□ -0.02
CHMP4A-201ENST00000347519 A0A1W2PN81 502 aa14.93□□□□□ -0.02
CHMP4A-201ENST00000347519 H3BP45 60 aa14.93□□□□□ -0.02
CHMP4A-201ENST00000347519 LYL1P12980 280 aa14.93□□□□□ -0.02
CHMP4A-201ENST00000347519 CHRNA7P36544 502 aa14.93□□□□□ -0.02
CHMP4A-201ENST00000347519 CRIP2P52943 208 aaPredicted RBP14.93□□□□□ -0.02
CHMP4A-201ENST00000347519 ECSCRQ19T08 205 aa14.93□□□□□ -0.02
CHMP4A-201ENST00000347519 PRSS54Q6PEW0 395 aa14.93□□□□□ -0.02
CHMP4A-201ENST00000347519 SMIM8Q96KF7 97 aa14.93□□□□□ -0.02
CHMP4A-201ENST00000347519 OR4C12Q96R67 309 aa14.93□□□□□ -0.02
CHMP4A-201ENST00000347519 HEYLQ9NQ87 328 aaPredicted RBP14.93□□□□□ -0.02
CHMP4A-201ENST00000347519 INS-IGF2F8WCM5 200 aa14.92□□□□□ -0.02
CHMP4A-201ENST00000347519 IGF1P05019 195 aa14.92□□□□□ -0.02
CHMP4A-201ENST00000347519 UNQ5815/PRO19632Q6UWF5 114 aa14.92□□□□□ -0.02
CHMP4A-201ENST00000347519 OR5T1Q8NG75 326 aa14.92□□□□□ -0.02
CHMP4A-201ENST00000347519 RAB40CQ96S21 281 aa14.92□□□□□ -0.02
CHMP4A-201ENST00000347519 ENY2Q9NPA8 101 aa14.92□□□□□ -0.02
CHMP4A-201ENST00000347519 PSENENQ9NZ42 101 aa14.92□□□□□ -0.02
CHMP4A-201ENST00000347519 CACFD1Q9UGQ2 172 aa14.92□□□□□ -0.02
CHMP4A-201ENST00000347519 FAM24AA6NFZ4 105 aa14.91□□□□□ -0.02
CHMP4A-201ENST00000347519 PFDN1O60925 122 aa14.91□□□□□ -0.02
CHMP4A-201ENST00000347519 RNASE2P10153 161 aaKnown RBP14.91□□□□□ -0.02
CHMP4A-201ENST00000347519 MFAP2P55001 183 aa14.91□□□□□ -0.02
CHMP4A-201ENST00000347519 BSXQ3C1V8 233 aa14.91□□□□□ -0.02
CHMP4A-201ENST00000347519 P2RX4Q99571 388 aa14.91□□□□□ -0.02
CHMP4A-201ENST00000347519 SRSF8Q9BRL6 282 aaKnown RBP14.91□□□□□ -0.02
CHMP4A-201ENST00000347519 ZFP57Q9NU63 452 aa14.91□□□□□ -0.02
CHMP4A-201ENST00000347519 SERTAD4Q9NUC0 356 aa14.91□□□□□ -0.02
CHMP4A-201ENST00000347519 DMRT1Q9Y5R6 373 aa14.91□□□□□ -0.02
CHMP4A-201ENST00000347519 TRAV41A0A0B4J266 112 aa14.9□□□□□ -0.02
CHMP4A-201ENST00000347519 C15orf62A8K5M9 175 aa14.9□□□□□ -0.02
CHMP4A-201ENST00000347519 L7N2F9 121 aa14.9□□□□□ -0.02
CHMP4A-201ENST00000347519 SOX15O60248 233 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms