RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 ARSJQ5FYB0 599 aaPredicted RBP11.43□□□□□ -0.58
CDK5RAP1-202ENST00000346416 C15orf54Q8N8G6 183 aa11.43□□□□□ -0.58
CDK5RAP1-202ENST00000346416 CLEC7AQ9BXN2 247 aa11.43□□□□□ -0.58
CDK5RAP1-202ENST00000346416 COMMD5Q9GZQ3 224 aa11.43□□□□□ -0.58
CDK5RAP1-202ENST00000346416 ARHGAP32A7KAX9 2087 aa11.43□□□□□ -0.58
CDK5RAP1-202ENST00000346416 C22orf46C9J442 243 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 IGLV2-23P01705 113 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 SNRNP70P08621 437 aaKnown RBP11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 DEFA4P12838 97 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 LY6G5BQ8NDX9 201 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 VSTM2AQ8TAG5 236 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 TMEM167AQ8TBQ9 72 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 RAB24Q969Q5 203 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 C1orf159Q96HA4 380 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 MGST2Q99735 147 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 ACTR3CQ9C0K3 210 aaPredicted RBP11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 CHODLQ9H9P2 273 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 NPVFQ9HCQ7 196 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 RPS10P5Q9NQ39 176 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 PUS1Q9Y606 427 aaKnown RBP eCLIP11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 IGHV3-72A0A0B4J1Y9 119 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 hCG_1809904A0A1W2PP81 198 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 A0A1W2PPE2 198 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 A0A1W2PR64 198 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 A0A1W2PRV1 198 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 C7orf77A4D0Y5 90 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 C19orf84I3L1E1 186 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 LIPFP07098 398 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 CDKN1AP38936 164 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 ACOT6Q3I5F7 207 aaPredicted RBP11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 OR10W1Q8NGF6 305 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 OR4A5Q8NH83 315 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 RITA1Q96K30 269 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 NDUFA4L2Q9NRX3 87 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 ONECUT1Q9UBC0 465 aa11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 LSM4Q9Y4Z0 139 aaKnown RBP11.42□□□□□ -0.58
CDK5RAP1-202ENST00000346416 ASH1LQ9NR48 2969 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP1-202ENST00000346416 AKAP6Q13023 2319 aa11.41□□□□□ -0.58
CDK5RAP1-202ENST00000346416 BUB1B-PAK6H3BSN5 160 aa11.41□□□□□ -0.58
CDK5RAP1-202ENST00000346416 CYB5BO43169 146 aa11.41□□□□□ -0.58
CDK5RAP1-202ENST00000346416 COX7A1P24310 79 aa11.41□□□□□ -0.58
CDK5RAP1-202ENST00000346416 OPRK1P41145 380 aa11.41□□□□□ -0.58
CDK5RAP1-202ENST00000346416 RHEBQ15382 184 aa11.41□□□□□ -0.58
CDK5RAP1-202ENST00000346416 GCSAMLQ5JQS6 135 aa11.41□□□□□ -0.58
CDK5RAP1-202ENST00000346416 BEND2Q8NDZ0 799 aa11.41□□□□□ -0.58
CDK5RAP1-202ENST00000346416 OR1L8Q8NGR8 309 aa11.41□□□□□ -0.58
CDK5RAP1-202ENST00000346416 GGTLC1Q9BX51 225 aa11.41□□□□□ -0.58
CDK5RAP1-202ENST00000346416 TMPRSS5Q9H3S3 457 aa11.41□□□□□ -0.58
CDK5RAP1-202ENST00000346416 E7EUB6 86 aa11.41□□□□□ -0.58
CDK5RAP1-202ENST00000346416 ENSAO43768 121 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP1-202ENST00000346416 IFNA1P01562 189 aa11.41□□□□□ -0.58
CDK5RAP1-202ENST00000346416 PMS2P11Q13670 270 aa11.41□□□□□ -0.58
CDK5RAP1-202ENST00000346416 TUBA4BQ9H853 241 aa11.41□□□□□ -0.58
CDK5RAP1-202ENST00000346416 ZNF430Q9H8G1 570 aaPredicted RBP11.41□□□□□ -0.58
CDK5RAP1-202ENST00000346416 UBTD1Q9HAC8 227 aa11.41□□□□□ -0.58
CDK5RAP1-202ENST00000346416 PATZ1Q9HBE1 687 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP1-202ENST00000346416 VAX2Q9UIW0 290 aa11.41□□□□□ -0.58
CDK5RAP1-202ENST00000346416 PLXNB1O43157 2135 aa11.4□□□□□ -0.58
CDK5RAP1-202ENST00000346416 COLCA2A8K830 154 aa11.4□□□□□ -0.58
CDK5RAP1-202ENST00000346416 H3BQ15 152 aa11.4□□□□□ -0.58
CDK5RAP1-202ENST00000346416 SLC25A17O43808 307 aa11.4□□□□□ -0.58
CDK5RAP1-202ENST00000346416 SOX15O60248 233 aa11.4□□□□□ -0.58
CDK5RAP1-202ENST00000346416 CDC34P49427 236 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP1-202ENST00000346416 BSXQ3C1V8 233 aa11.4□□□□□ -0.58
CDK5RAP1-202ENST00000346416 C2orf83Q53S99 150 aa11.4□□□□□ -0.58
CDK5RAP1-202ENST00000346416 TEPPQ6URK8 271 aa11.4□□□□□ -0.58
CDK5RAP1-202ENST00000346416 RBMS3Q6XE24 437 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP1-202ENST00000346416 OR4P4Q8NGL7 312 aa11.4□□□□□ -0.58
CDK5RAP1-202ENST00000346416 INSIG2Q9Y5U4 225 aa11.4□□□□□ -0.58
CDK5RAP1-202ENST00000346416 PXMP4Q9Y6I8 212 aa11.4□□□□□ -0.58
CDK5RAP1-202ENST00000346416 NAV3Q8IVL0 2385 aa11.4□□□□□ -0.59
CDK5RAP1-202ENST00000346416 NDUFS7O75251 213 aa11.39□□□□□ -0.59
CDK5RAP1-202ENST00000346416 YIF1AO95070 293 aa11.39□□□□□ -0.59
CDK5RAP1-202ENST00000346416 RNASE2P10153 161 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP1-202ENST00000346416 FOLR2P14207 255 aa11.39□□□□□ -0.59
CDK5RAP1-202ENST00000346416 LGALS7P47929 136 aa11.39□□□□□ -0.59
CDK5RAP1-202ENST00000346416 ATP5IP56385 69 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP1-202ENST00000346416 VMA21Q3ZAQ7 101 aa11.39□□□□□ -0.59
CDK5RAP1-202ENST00000346416 MIC13Q5XKP0 118 aa11.39□□□□□ -0.59
CDK5RAP1-202ENST00000346416 PNKDQ8N490 385 aa11.39□□□□□ -0.59
CDK5RAP1-202ENST00000346416 SSMEM1Q8WWF3 244 aa11.39□□□□□ -0.59
CDK5RAP1-202ENST00000346416 SSBP3Q9BWW4 388 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP1-202ENST00000346416 TPSG1Q9NRR2 321 aa11.39□□□□□ -0.59
CDK5RAP1-202ENST00000346416 IGHV1-3A0A0C4DH29 117 aa11.39□□□□□ -0.59
CDK5RAP1-202ENST00000346416 SEC14L6B5MCN3 397 aa11.39□□□□□ -0.59
CDK5RAP1-202ENST00000346416 CRYBA1P05813 215 aa11.39□□□□□ -0.59
CDK5RAP1-202ENST00000346416 ARF6P62330 175 aa11.39□□□□□ -0.59
CDK5RAP1-202ENST00000346416 C10orf55Q5SWW7 151 aa11.39□□□□□ -0.59
CDK5RAP1-202ENST00000346416 MOB3BQ86TA1 216 aa11.39□□□□□ -0.59
CDK5RAP1-202ENST00000346416 P2RX4Q99571 388 aa11.39□□□□□ -0.59
CDK5RAP1-202ENST00000346416 COL12A1Q99715 3063 aa11.39□□□□□ -0.59
CDK5RAP1-202ENST00000346416 LOC105371242A0A075B767 164 aa11.38□□□□□ -0.59
CDK5RAP1-202ENST00000346416 CGB1A6NKQ9 187 aa11.38□□□□□ -0.59
CDK5RAP1-202ENST00000346416 FNDC10F2Z333 226 aa11.38□□□□□ -0.59
CDK5RAP1-202ENST00000346416 ERHP84090 104 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP1-202ENST00000346416 FAM90A2PQ658T7 463 aa11.38□□□□□ -0.59
CDK5RAP1-202ENST00000346416 IQCF2Q8IXL9 164 aa11.38□□□□□ -0.59
CDK5RAP1-202ENST00000346416 RPEQ96AT9 228 aa11.38□□□□□ -0.59
CDK5RAP1-202ENST00000346416 NIPSNAP3BQ9BS92 247 aa11.38□□□□□ -0.59
CDK5RAP1-202ENST00000346416 SAV1Q9H4B6 383 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms