RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 IGHV3-35A0A0C4DH35 117 aa9.37□□□□□ -0.91
SGCA-202ENST00000344627 MFSD2BA6NFX1 497 aa9.37□□□□□ -0.91
SGCA-202ENST00000344627 ZNF785A8K8V0 405 aa9.37□□□□□ -0.91
SGCA-202ENST00000344627 LGALS9O00182 355 aa9.37□□□□□ -0.91
SGCA-202ENST00000344627 GPR31O00270 319 aa9.37□□□□□ -0.91
SGCA-202ENST00000344627 CD7P09564 240 aa9.37□□□□□ -0.91
SGCA-202ENST00000344627 TRAPPC2P0DI81 140 aa9.37□□□□□ -0.91
SGCA-202ENST00000344627 TRAPPC2BP0DI82 140 aa9.37□□□□□ -0.91
SGCA-202ENST00000344627 SMIM18P0DKX4 95 aa9.37□□□□□ -0.91
SGCA-202ENST00000344627 NAT1P18440 290 aa9.37□□□□□ -0.91
SGCA-202ENST00000344627 CBLN1P23435 193 aa9.37□□□□□ -0.91
SGCA-202ENST00000344627 GPR183P32249 361 aa9.37□□□□□ -0.91
SGCA-202ENST00000344627 G6PCP35575 357 aa9.37□□□□□ -0.91
SGCA-202ENST00000344627 POU2AF1Q16633 256 aa9.37□□□□□ -0.91
SGCA-202ENST00000344627 ZNF57Q68EA5 555 aaPredicted RBP9.37□□□□□ -0.91
SGCA-202ENST00000344627 PLET1Q6UQ28 207 aa9.37□□□□□ -0.91
SGCA-202ENST00000344627 GPR141Q7Z602 305 aa9.37□□□□□ -0.91
SGCA-202ENST00000344627 DEFB125Q8N687 156 aa9.37□□□□□ -0.91
SGCA-202ENST00000344627 DGCR14Q96DF8 476 aaKnown RBP9.37□□□□□ -0.91
SGCA-202ENST00000344627 WDR89Q96FK6 387 aaPredicted RBP9.37□□□□□ -0.91
SGCA-202ENST00000344627 SRSF8Q9BRL6 282 aaKnown RBP9.37□□□□□ -0.91
SGCA-202ENST00000344627 FUNDC2Q9BWH2 189 aa9.37□□□□□ -0.91
SGCA-202ENST00000344627 NSG2Q9Y328 171 aa9.37□□□□□ -0.91
SGCA-202ENST00000344627 OR51B2Q9Y5P1 312 aa9.37□□□□□ -0.91
SGCA-202ENST00000344627 DMRT1Q9Y5R6 373 aa9.37□□□□□ -0.91
SGCA-202ENST00000344627 IGHV3-21A0A0B4J1V1 117 aa9.36□□□□□ -0.91
SGCA-202ENST00000344627 TEX50A0A1B0GTY4 177 aa9.36□□□□□ -0.91
SGCA-202ENST00000344627 IGLC7A0M8Q6 106 aa9.36□□□□□ -0.91
SGCA-202ENST00000344627 MARCH11A6NNE9 402 aa9.36□□□□□ -0.91
SGCA-202ENST00000344627 OR11H12B2RN74 326 aa9.36□□□□□ -0.91
SGCA-202ENST00000344627 FAM25AB3EWG3 89 aa9.36□□□□□ -0.91
SGCA-202ENST00000344627 FAM25CB3EWG5 89 aa9.36□□□□□ -0.91
SGCA-202ENST00000344627 FAM25GB3EWG6 89 aa9.36□□□□□ -0.91
SGCA-202ENST00000344627 HPGDSO60760 199 aa9.36□□□□□ -0.91
SGCA-202ENST00000344627 NOL3O60936 208 aaKnown RBP9.36□□□□□ -0.91
SGCA-202ENST00000344627 APOA1P02647 267 aa9.36□□□□□ -0.91
SGCA-202ENST00000344627 ANKRD55Q3KP44 614 aa9.36□□□□□ -0.91
SGCA-202ENST00000344627 TM4SF20Q53R12 229 aa9.36□□□□□ -0.91
SGCA-202ENST00000344627 RNASE12Q5GAN4 147 aaKnown RBP9.36□□□□□ -0.91
SGCA-202ENST00000344627 LYSMD2Q8IV50 215 aa9.36□□□□□ -0.91
SGCA-202ENST00000344627 UXS1Q8NBZ7 420 aa9.36□□□□□ -0.91
SGCA-202ENST00000344627 FCAMRQ8WWV6 532 aa9.36□□□□□ -0.91
SGCA-202ENST00000344627 FXYD6Q9H0Q3 95 aa9.36□□□□□ -0.91
SGCA-202ENST00000344627 NDUFA13Q9P0J0 144 aa9.36□□□□□ -0.91
SGCA-202ENST00000344627 ANAPC10Q9UM13 185 aa9.36□□□□□ -0.91
SGCA-202ENST00000344627 SCAF4O95104 1147 aaKnown RBP9.35□□□□□ -0.91
SGCA-202ENST00000344627 ALDH3B2P48448 385 aa9.35□□□□□ -0.91
SGCA-202ENST00000344627 RORCP51449 518 aa9.35□□□□□ -0.91
SGCA-202ENST00000344627 ZNF585BQ52M93 769 aa9.35□□□□□ -0.91
SGCA-202ENST00000344627 THOC7Q6I9Y2 204 aaKnown RBP9.35□□□□□ -0.91
SGCA-202ENST00000344627 LPCAT3Q6P1A2 487 aa9.35□□□□□ -0.91
SGCA-202ENST00000344627 MZT2AQ6P582 158 aa9.35□□□□□ -0.91
SGCA-202ENST00000344627 SLC16A13Q7RTY0 426 aa9.35□□□□□ -0.91
SGCA-202ENST00000344627 GDPD1Q8N9F7 314 aa9.35□□□□□ -0.91
SGCA-202ENST00000344627 OR52B4Q8NGK2 314 aa9.35□□□□□ -0.91
SGCA-202ENST00000344627 GPX8Q8TED1 209 aa9.35□□□□□ -0.91
SGCA-202ENST00000344627 BCL7BQ9BQE9 202 aa9.35□□□□□ -0.91
SGCA-202ENST00000344627 WFDC10AQ9H1F0 79 aa9.35□□□□□ -0.91
SGCA-202ENST00000344627 HIPK2Q9H2X6 1198 aa9.35□□□□□ -0.91
SGCA-202ENST00000344627 SRD5A3Q9H8P0 318 aa9.35□□□□□ -0.91
SGCA-202ENST00000344627 RETNQ9HD89 108 aa9.35□□□□□ -0.91
SGCA-202ENST00000344627 CSMD3Q7Z407 3707 aa9.35□□□□□ -0.91
SGCA-202ENST00000344627 TENM2Q9NT68 2774 aa9.35□□□□□ -0.91
SGCA-202ENST00000344627 TMEM213A2RRL7 107 aa9.34□□□□□ -0.91
SGCA-202ENST00000344627 OR2T8A6NH00 312 aa9.34□□□□□ -0.91
SGCA-202ENST00000344627 SERPINE2P07093 398 aa9.34□□□□□ -0.91
SGCA-202ENST00000344627 ELK1P19419 428 aa9.34□□□□□ -0.91
SGCA-202ENST00000344627 PTBP1P26599 531 aaKnown RBP eCLIP9.34□□□□□ -0.91
SGCA-202ENST00000344627 RCVRNP35243 200 aa9.34□□□□□ -0.91
SGCA-202ENST00000344627 KLK9Q2XQG4 91 aa9.34□□□□□ -0.91
SGCA-202ENST00000344627 BTNL8Q6UX41 500 aa9.34□□□□□ -0.91
SGCA-202ENST00000344627 UNQ9165/PRO28630Q6UXU0 137 aa9.34□□□□□ -0.91
SGCA-202ENST00000344627 RBPMS2Q6ZRY4 209 aaKnown RBP9.34□□□□□ -0.91
SGCA-202ENST00000344627 HSD17B13Q7Z5P4 300 aaPredicted RBP9.34□□□□□ -0.91
SGCA-202ENST00000344627 TBC1D26Q86UD7 250 aa9.34□□□□□ -0.91
SGCA-202ENST00000344627 UBAC2Q8NBM4 344 aa9.34□□□□□ -0.91
SGCA-202ENST00000344627 ZNF502Q8TBZ5 544 aa9.34□□□□□ -0.91
SGCA-202ENST00000344627 TMEM56Q96MV1 263 aa9.34□□□□□ -0.91
SGCA-202ENST00000344627 FAM110AQ9BQ89 295 aa9.34□□□□□ -0.91
SGCA-202ENST00000344627 SCPEP1Q9HB40 452 aa9.34□□□□□ -0.91
SGCA-202ENST00000344627 BATF3Q9NR55 127 aa9.34□□□□□ -0.91
SGCA-202ENST00000344627 NDUFA4L2Q9NRX3 87 aa9.34□□□□□ -0.91
SGCA-202ENST00000344627 FKBP11Q9NYL4 201 aa9.34□□□□□ -0.91
SGCA-202ENST00000344627 MLXQ9UH92 298 aa9.34□□□□□ -0.91
SGCA-202ENST00000344627 KLK9Q9UKQ9 250 aa9.34□□□□□ -0.91
SGCA-202ENST00000344627 PRNDQ9UKY0 176 aa9.34□□□□□ -0.91
SGCA-202ENST00000344627 UFC1Q9Y3C8 167 aa9.34□□□□□ -0.91
SGCA-202ENST00000344627 STARD9Q9P2P6 4700 aa9.34□□□□□ -0.91
SGCA-202ENST00000344627 RBMY1BA6NDE4 496 aaKnown RBP9.33□□□□□ -0.92
SGCA-202ENST00000344627 RBMY1EA6NEQ0 496 aaKnown RBP9.33□□□□□ -0.92
SGCA-202ENST00000344627 M0QYG6 137 aa9.33□□□□□ -0.92
SGCA-202ENST00000344627 TGOLN2O43493 480 aa9.33□□□□□ -0.92
SGCA-202ENST00000344627 FGF2P09038 288 aa9.33□□□□□ -0.92
SGCA-202ENST00000344627 RBMY1DP0C7P1 496 aaKnown RBP9.33□□□□□ -0.92
SGCA-202ENST00000344627 PGAM2P15259 253 aa9.33□□□□□ -0.92
SGCA-202ENST00000344627 WT1-ASQ06250 92 aa9.33□□□□□ -0.92
SGCA-202ENST00000344627 H2BFWTQ7Z2G1 175 aa9.33□□□□□ -0.92
SGCA-202ENST00000344627 TMEM61Q8N0U2 210 aa9.33□□□□□ -0.92
SGCA-202ENST00000344627 OR4A16Q8NH70 328 aa9.33□□□□□ -0.92
SGCA-202ENST00000344627 VN1R17PQ8TDU5 208 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms