RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 BUB1B-PAK6H3BSN5 160 aa10.83□□□□□ -0.68
HERPUD1-202ENST00000344114 IL6RP08887 468 aaPredicted RBP10.83□□□□□ -0.68
HERPUD1-202ENST00000344114 FGF2P09038 288 aa10.83□□□□□ -0.68
HERPUD1-202ENST00000344114 MDKP21741 143 aaPredicted RBP10.83□□□□□ -0.68
HERPUD1-202ENST00000344114 RPP30P78346 268 aaKnown RBP10.83□□□□□ -0.68
HERPUD1-202ENST00000344114 SPANXN5Q5MJ07 72 aa10.83□□□□□ -0.68
HERPUD1-202ENST00000344114 VKORC1L1Q8N0U8 176 aa10.83□□□□□ -0.68
HERPUD1-202ENST00000344114 TMEM217Q8N7C4 229 aa10.83□□□□□ -0.68
HERPUD1-202ENST00000344114 SAT2Q96F10 170 aaPredicted RBP10.83□□□□□ -0.68
HERPUD1-202ENST00000344114 HARBI1Q96MB7 349 aa10.83□□□□□ -0.68
HERPUD1-202ENST00000344114 FAM210AQ96ND0 272 aa10.83□□□□□ -0.68
HERPUD1-202ENST00000344114 TSNAXQ99598 290 aaKnown RBP10.83□□□□□ -0.68
HERPUD1-202ENST00000344114 MMP26Q9NRE1 261 aa10.83□□□□□ -0.68
HERPUD1-202ENST00000344114 TMEM14BQ9NUH8 114 aa10.83□□□□□ -0.68
HERPUD1-202ENST00000344114 ZNF257Q9Y2Q1 563 aa10.83□□□□□ -0.68
HERPUD1-202ENST00000344114 KPTNQ9Y664 436 aa10.83□□□□□ -0.68
HERPUD1-202ENST00000344114 UPK2O00526 184 aa10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 FBXO24O75426 580 aa10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 IFNA5P01569 189 aa10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 IGKV1-16P04430 117 aa10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 ARG1P05089 322 aa10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 METTL15P1P0C7V9 234 aa10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 SAA1P0DJI8 122 aaPredicted RBP10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 REG1BP48304 166 aa10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 ATP6V1FQ16864 119 aa10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 PUSL1Q8N0Z8 303 aaKnown RBP10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 LILRB2Q8N423 598 aa10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 Q8N7P7 452 aa10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 OR11H6Q8NGC7 330 aa10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 OR4P4Q8NGL7 312 aa10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 OR4A5Q8NH83 315 aa10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 VSTM2AQ8TAG5 236 aa10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 TAF15Q92804 592 aaKnown RBP eCLIP10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 LHX4Q969G2 390 aa10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 ZDHHC16Q969W1 377 aa10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 FLYWCH2Q96CP2 140 aaKnown RBP10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 GNPNAT1Q96EK6 184 aaPredicted RBP10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 CITED4Q96RK1 184 aa10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 PARD6GQ9BYG4 376 aaPredicted RBP10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 FKBP11Q9NYL4 201 aa10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 TCF19Q9Y242 345 aa10.82□□□□□ -0.68
HERPUD1-202ENST00000344114 TRAV3A0A0B4J244 114 aa10.81□□□□□ -0.68
HERPUD1-202ENST00000344114 COX7A1P24310 79 aa10.81□□□□□ -0.68
HERPUD1-202ENST00000344114 HOXA1P49639 335 aaPredicted RBP10.81□□□□□ -0.68
HERPUD1-202ENST00000344114 RAB5CP51148 216 aa10.81□□□□□ -0.68
HERPUD1-202ENST00000344114 HSPE1P61604 102 aaKnown RBP10.81□□□□□ -0.68
HERPUD1-202ENST00000344114 ARF6P62330 175 aa10.81□□□□□ -0.68
HERPUD1-202ENST00000344114 BLOC1S1P78537 153 aa10.81□□□□□ -0.68
HERPUD1-202ENST00000344114 SLC38A11Q08AI6 406 aa10.81□□□□□ -0.68
HERPUD1-202ENST00000344114 C9orf139Q6ZV77 190 aa10.81□□□□□ -0.68
HERPUD1-202ENST00000344114 HSD17B13Q7Z5P4 300 aaPredicted RBP10.81□□□□□ -0.68
HERPUD1-202ENST00000344114 PNKDQ8N490 385 aa10.81□□□□□ -0.68
HERPUD1-202ENST00000344114 HSD17B11Q8NBQ5 300 aa10.81□□□□□ -0.68
HERPUD1-202ENST00000344114 PINX1Q96BK5 328 aaKnown RBP10.81□□□□□ -0.68
HERPUD1-202ENST00000344114 OR4C12Q96R67 309 aa10.81□□□□□ -0.68
HERPUD1-202ENST00000344114 HIPK2Q9H2X6 1198 aa10.81□□□□□ -0.68
HERPUD1-202ENST00000344114 INSIG2Q9Y5U4 225 aa10.81□□□□□ -0.68
HERPUD1-202ENST00000344114 IGHV2-70DA0A0C4DH43 119 aa10.8□□□□□ -0.68
HERPUD1-202ENST00000344114 ANKRD34BA5PLL1 514 aa10.8□□□□□ -0.68
HERPUD1-202ENST00000344114 ZNF705EA8MWA4 302 aaPredicted RBP10.8□□□□□ -0.68
HERPUD1-202ENST00000344114 NUDT19A8MXV4 375 aa10.8□□□□□ -0.68
HERPUD1-202ENST00000344114 ODF3BA8MYP8 253 aa10.8□□□□□ -0.68
HERPUD1-202ENST00000344114 KBTBD11O94819 623 aa10.8□□□□□ -0.68
HERPUD1-202ENST00000344114 CEACAM3P40198 252 aa10.8□□□□□ -0.68
HERPUD1-202ENST00000344114 VDAC2P45880 294 aaPredicted RBP10.8□□□□□ -0.68
HERPUD1-202ENST00000344114 RPS16P62249 146 aaKnown RBP10.8□□□□□ -0.68
HERPUD1-202ENST00000344114 DIAPH2-AS1Q14236 149 aa10.8□□□□□ -0.68
HERPUD1-202ENST00000344114 VMA21Q3ZAQ7 101 aa10.8□□□□□ -0.68
HERPUD1-202ENST00000344114 HAPLN4Q86UW8 402 aa10.8□□□□□ -0.68
HERPUD1-202ENST00000344114 RPEQ96AT9 228 aa10.8□□□□□ -0.68
HERPUD1-202ENST00000344114 MS4A7Q9GZW8 240 aaPredicted RBP10.8□□□□□ -0.68
HERPUD1-202ENST00000344114 ENY2Q9NPA8 101 aa10.8□□□□□ -0.68
HERPUD1-202ENST00000344114 NOTCH1P46531 2555 aa10.8□□□□□ -0.68
HERPUD1-202ENST00000344114 IGHV1-3A0A0C4DH29 117 aa10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 A0A1B0GUS0 222 aa10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 MFSD2BA6NFX1 497 aa10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 SRRM4A7MD48 611 aaKnown RBP10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 PMS2P5A8MQ11 134 aa10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 LY6LH3BQJ8 138 aa10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 OR8U8P0C7N1 319 aa10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 ATP6V0CP27449 155 aa10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 HTR1DP28221 377 aa10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 LGALS7P47929 136 aa10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 PAX2Q02962 417 aa10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 ARL16Q0P5N6 197 aa10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 AANATQ16613 207 aa10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 SPINK9Q5DT21 86 aa10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 SLC25A24Q6NUK1 477 aa10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 EIF4E3Q8N5X7 224 aaKnown RBP10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 OR10P1Q8NGE3 313 aa10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 OR5B3Q8NH48 314 aa10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 TMEM167AQ8TBQ9 72 aa10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 WFDC12Q8WWY7 111 aa10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 TMEM147Q9BVK8 224 aa10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 HEYLQ9NQ87 328 aaPredicted RBP10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 SIRT7Q9NRC8 400 aa10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 OR51B2Q9Y5P1 312 aa10.79□□□□□ -0.68
HERPUD1-202ENST00000344114 C15orf62A8K5M9 175 aa10.78□□□□□ -0.68
HERPUD1-202ENST00000344114 UMAD1C9J7I0 102 aa10.78□□□□□ -0.68
HERPUD1-202ENST00000344114 DLX1P56177 255 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms