RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 CST9LQ9H4G1 147 aa12.31□□□□□ -0.44
CLCN1-201ENST00000343257 TECRQ9NZ01 308 aaKnown RBP12.31□□□□□ -0.44
CLCN1-201ENST00000343257 METRNQ9UJH8 293 aa12.31□□□□□ -0.44
CLCN1-201ENST00000343257 TRAV9-2A0A087WT02 112 aa12.31□□□□□ -0.44
CLCN1-201ENST00000343257 ZNF891A8MT65 544 aaPredicted RBP12.31□□□□□ -0.44
CLCN1-201ENST00000343257 MFAP2P55001 183 aa12.31□□□□□ -0.44
CLCN1-201ENST00000343257 RIPPLY3P57055 190 aa12.31□□□□□ -0.44
CLCN1-201ENST00000343257 HES3Q5TGS1 186 aa12.31□□□□□ -0.44
CLCN1-201ENST00000343257 Q6ZR03 302 aa12.31□□□□□ -0.44
CLCN1-201ENST00000343257 OR4F17Q8NGA8 305 aa12.31□□□□□ -0.44
CLCN1-201ENST00000343257 KCNE4Q8WWG9 221 aa12.31□□□□□ -0.44
CLCN1-201ENST00000343257 PLEKHA3Q9HB20 300 aa12.31□□□□□ -0.44
CLCN1-201ENST00000343257 MRPS16Q9Y3D3 137 aaKnown RBP12.31□□□□□ -0.44
CLCN1-201ENST00000343257 MPC1Q9Y5U8 109 aa12.31□□□□□ -0.44
CLCN1-201ENST00000343257 TRGV10A0A0A0MS01 117 aa12.3□□□□□ -0.44
CLCN1-201ENST00000343257 FAM181BA6NEQ2 426 aa12.3□□□□□ -0.44
CLCN1-201ENST00000343257 SNAI2O43623 268 aa12.3□□□□□ -0.44
CLCN1-201ENST00000343257 BPIFB3P59826 476 aa12.3□□□□□ -0.44
CLCN1-201ENST00000343257 RHOBP62745 196 aa12.3□□□□□ -0.44
CLCN1-201ENST00000343257 C1orf159Q96HA4 380 aa12.3□□□□□ -0.44
CLCN1-201ENST00000343257 MBNL3Q9NUK0 354 aaKnown RBP12.3□□□□□ -0.44
CLCN1-201ENST00000343257 KMT2EQ8IZD2 1858 aa12.3□□□□□ -0.44
CLCN1-201ENST00000343257 CELA3BP08861 270 aa12.3□□□□□ -0.44
CLCN1-201ENST00000343257 LTBRP36941 435 aa12.3□□□□□ -0.44
CLCN1-201ENST00000343257 GCNT2Q8N0V5 402 aa12.3□□□□□ -0.44
CLCN1-201ENST00000343257 TAAR6Q96RI8 345 aa12.3□□□□□ -0.44
CLCN1-201ENST00000343257 PMCHL2Q9BQD1 86 aa12.3□□□□□ -0.44
CLCN1-201ENST00000343257 ZNF355PQ9NSJ1 428 aa12.3□□□□□ -0.44
CLCN1-201ENST00000343257 SVILO95425 2214 aa12.3□□□□□ -0.44
CLCN1-201ENST00000343257 IGHV1-69-2A0A0G2JMI3 117 aa12.3□□□□□ -0.44
CLCN1-201ENST00000343257 TMEM30CPA0ZSE6 113 aa12.3□□□□□ -0.44
CLCN1-201ENST00000343257 FOXF2Q12947 444 aa12.3□□□□□ -0.44
CLCN1-201ENST00000343257 RPL39P5Q59GN2 51 aa12.3□□□□□ -0.44
CLCN1-201ENST00000343257 LINC00173Q6ZV60 143 aa12.3□□□□□ -0.44
CLCN1-201ENST00000343257 OR2Y1Q8NGV0 311 aa12.3□□□□□ -0.44
CLCN1-201ENST00000343257 TRBV9A0A0B4J1U6 114 aa12.29□□□□□ -0.44
CLCN1-201ENST00000343257 MUC21A0A0G2JKD1 596 aa12.29□□□□□ -0.44
CLCN1-201ENST00000343257 MUC21A0A140T8X8 626 aa12.29□□□□□ -0.44
CLCN1-201ENST00000343257 CER1O95813 267 aa12.29□□□□□ -0.44
CLCN1-201ENST00000343257 FOXA3P55318 350 aaPredicted RBP12.29□□□□□ -0.44
CLCN1-201ENST00000343257 RPL19P84098 196 aaKnown RBP12.29□□□□□ -0.44
CLCN1-201ENST00000343257 OCIAD2Q56VL3 154 aa12.29□□□□□ -0.44
CLCN1-201ENST00000343257 MUC21Q5SSG8 566 aa12.29□□□□□ -0.44
CLCN1-201ENST00000343257 OR13A1Q8NGR1 328 aa12.29□□□□□ -0.44
CLCN1-201ENST00000343257 OR2T6Q8NHC8 308 aa12.29□□□□□ -0.44
CLCN1-201ENST00000343257 RTL8AQ9BWD3 113 aa12.29□□□□□ -0.44
CLCN1-201ENST00000343257 HES7Q9BYE0 225 aa12.29□□□□□ -0.44
CLCN1-201ENST00000343257 HCFC1P51610 2035 aa12.29□□□□□ -0.44
CLCN1-201ENST00000343257 TRAV9-1A0A075B6T8 112 aa12.29□□□□□ -0.44
CLCN1-201ENST00000343257 M0R1X1 148 aa12.29□□□□□ -0.44
CLCN1-201ENST00000343257 MT-ND6P03923 174 aa12.29□□□□□ -0.44
CLCN1-201ENST00000343257 C19orf35Q6ZS72 473 aa12.29□□□□□ -0.44
CLCN1-201ENST00000343257 BCL2L2Q92843 193 aaPredicted RBP12.29□□□□□ -0.44
CLCN1-201ENST00000343257 FZR1Q9UM11 496 aa12.29□□□□□ -0.44
CLCN1-201ENST00000343257 KLF7O75840 302 aaPredicted RBP12.28□□□□□ -0.44
CLCN1-201ENST00000343257 MT-CO2P00403 227 aa12.28□□□□□ -0.44
CLCN1-201ENST00000343257 UBE2G1P62253 170 aa12.28□□□□□ -0.44
CLCN1-201ENST00000343257 TRAT1Q6PIZ9 186 aa12.28□□□□□ -0.44
CLCN1-201ENST00000343257 Q8TCH9 128 aa12.28□□□□□ -0.44
CLCN1-201ENST00000343257 LEAP2Q969E1 77 aa12.28□□□□□ -0.44
CLCN1-201ENST00000343257 SH2D2AQ9NP31 389 aa12.28□□□□□ -0.44
CLCN1-201ENST00000343257 HLA-DQA1P01909 254 aa12.28□□□□□ -0.44
CLCN1-201ENST00000343257 TCTAP57738 103 aa12.28□□□□□ -0.44
CLCN1-201ENST00000343257 GDF5OSQ5U4N7 250 aa12.28□□□□□ -0.44
CLCN1-201ENST00000343257 SPACA3Q8IXA5 215 aa12.28□□□□□ -0.44
CLCN1-201ENST00000343257 PKIBQ9C010 78 aa12.28□□□□□ -0.44
CLCN1-201ENST00000343257 NPVFQ9HCQ7 196 aa12.28□□□□□ -0.44
CLCN1-201ENST00000343257 HEATR1Q9H583 2144 aaKnown RBP12.28□□□□□ -0.44
CLCN1-201ENST00000343257 SAA2-SAA4A0A096LPE2 208 aa12.28□□□□□ -0.44
CLCN1-201ENST00000343257 DNPH1O43598 174 aa12.28□□□□□ -0.44
CLCN1-201ENST00000343257 GFRA3O60609 400 aa12.28□□□□□ -0.44
CLCN1-201ENST00000343257 GPR12P47775 334 aa12.28□□□□□ -0.44
CLCN1-201ENST00000343257 MLANAQ16655 118 aa12.28□□□□□ -0.44
CLCN1-201ENST00000343257 MUC15Q8N387 334 aa12.28□□□□□ -0.44
CLCN1-201ENST00000343257 CDX2Q99626 313 aaPredicted RBP12.28□□□□□ -0.44
CLCN1-201ENST00000343257 TXNDC17Q9BRA2 123 aa12.28□□□□□ -0.44
CLCN1-201ENST00000343257 OBP2BQ9NPH6 170 aa12.28□□□□□ -0.44
CLCN1-201ENST00000343257 TRAV30A0A087WSZ9 112 aa12.27□□□□□ -0.44
CLCN1-201ENST00000343257 C9JCJ5 164 aa12.27□□□□□ -0.44
CLCN1-201ENST00000343257 TEPPQ6URK8 271 aa12.27□□□□□ -0.44
CLCN1-201ENST00000343257 SMIM15Q7Z3B0 74 aa12.27□□□□□ -0.44
CLCN1-201ENST00000343257 MDP1Q86V88 176 aa12.27□□□□□ -0.44
CLCN1-201ENST00000343257 COQ2Q96H96 371 aa12.27□□□□□ -0.44
CLCN1-201ENST00000343257 PI4KAP42356 2102 aa12.27□□□□□ -0.45
CLCN1-201ENST00000343257 OR4C46A6NHA9 309 aa12.27□□□□□ -0.45
CLCN1-201ENST00000343257 TAX1BP3O14907 124 aa12.27□□□□□ -0.45
CLCN1-201ENST00000343257 NPY1RP25929 384 aa12.27□□□□□ -0.45
CLCN1-201ENST00000343257 OR52E5Q8NH55 327 aa12.27□□□□□ -0.45
CLCN1-201ENST00000343257 GNG12Q9UBI6 72 aa12.27□□□□□ -0.45
CLCN1-201ENST00000343257 IL19Q9UHD0 177 aa12.27□□□□□ -0.45
CLCN1-201ENST00000343257 DSPP15924 2871 aaKnown RBP12.27□□□□□ -0.45
CLCN1-201ENST00000343257 GGTLC3B5MD39 225 aa12.26□□□□□ -0.45
CLCN1-201ENST00000343257 CORTO00230 105 aa12.26□□□□□ -0.45
CLCN1-201ENST00000343257 MMP23AO75900 390 aa12.26□□□□□ -0.45
CLCN1-201ENST00000343257 EIF4EBP1Q13541 118 aaPredicted RBP12.26□□□□□ -0.45
CLCN1-201ENST00000343257 WFDC8Q8IUA0 241 aa12.26□□□□□ -0.45
CLCN1-201ENST00000343257 NUDT10Q8NFP7 164 aa12.26□□□□□ -0.45
CLCN1-201ENST00000343257 TMEM45BQ96B21 275 aa12.26□□□□□ -0.45
CLCN1-201ENST00000343257 NAA38Q9BRA0 125 aaKnown RBP12.26□□□□□ -0.45
CLCN1-201ENST00000343257 TNCP24821 2201 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms