RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 RALYQ9UKM9 306 aaKnown RBP6.8□□□□□ -1.32
UBE4B-202ENST00000343090 PINLYPA6NC86 204 aa6.8□□□□□ -1.32
UBE4B-202ENST00000343090 AREGP15514 252 aa6.8□□□□□ -1.32
UBE4B-202ENST00000343090 BTF3P20290 206 aaKnown RBP6.8□□□□□ -1.32
UBE4B-202ENST00000343090 CTSSP25774 331 aa6.8□□□□□ -1.32
UBE4B-202ENST00000343090 RPL30P62888 115 aaKnown RBP6.8□□□□□ -1.32
UBE4B-202ENST00000343090 PSG7Q13046 419 aa6.8□□□□□ -1.32
UBE4B-202ENST00000343090 GAGE1Q13065 139 aa6.8□□□□□ -1.32
UBE4B-202ENST00000343090 MRPL52Q86TS9 123 aaKnown RBP6.8□□□□□ -1.32
UBE4B-202ENST00000343090 MMD2Q8IY49 270 aa6.8□□□□□ -1.32
UBE4B-202ENST00000343090 GUCD1Q96NT3 240 aa6.8□□□□□ -1.32
UBE4B-202ENST00000343090 NABP2Q9BQ15 211 aa6.8□□□□□ -1.32
UBE4B-202ENST00000343090 HSPB8Q9UJY1 196 aa6.8□□□□□ -1.32
UBE4B-202ENST00000343090 RALGAPA1Q6GYQ0 2036 aa6.8□□□□□ -1.32
UBE4B-202ENST00000343090 MOSP00540 346 aa6.8□□□□□ -1.32
UBE4B-202ENST00000343090 HLA-DQA1P01909 254 aa6.8□□□□□ -1.32
UBE4B-202ENST00000343090 AMY1AP04745 511 aa6.8□□□□□ -1.32
UBE4B-202ENST00000343090 FAM27E3Q08E93 113 aa6.8□□□□□ -1.32
UBE4B-202ENST00000343090 CSRP2Q16527 193 aa6.8□□□□□ -1.32
UBE4B-202ENST00000343090 FAM19A2Q8N3H0 131 aa6.8□□□□□ -1.32
UBE4B-202ENST00000343090 RNASEH2CQ8TDP1 164 aaKnown RBP6.8□□□□□ -1.32
UBE4B-202ENST00000343090 NPIPB3Q92617 1050 aa6.8□□□□□ -1.32
UBE4B-202ENST00000343090 PSMG3Q9BT73 122 aaPredicted RBP6.8□□□□□ -1.32
UBE4B-202ENST00000343090 C1RLQ9NZP8 487 aa6.8□□□□□ -1.32
UBE4B-202ENST00000343090 ZSWIM8A7E2V4 1837 aa6.8□□□□□ -1.32
UBE4B-202ENST00000343090 NDUFS8O00217 210 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 CORTO00230 105 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 SLC17A3O00476 420 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 CLPSP04118 112 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 LYL1P12980 280 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 C5orf24Q7Z6I8 188 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 CDC42EP3Q9UKI2 254 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 IGHV3-35A0A0C4DH35 117 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 TWIST1Q15672 202 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 DGAT2L7PQ6IED9 249 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 C1orf174Q8IYL3 243 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 KCNS1Q96KK3 526 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 MYLKQ15746 1914 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 SPTBN2O15020 2390 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 C8orf88P0DMB2 117 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 IGHV1-2P23083 117 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 GCHFRP30047 84 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 GPR6P46095 362 aaPredicted RBP6.79□□□□□ -1.32
UBE4B-202ENST00000343090 FOXG1P55316 489 aaPredicted RBP6.79□□□□□ -1.32
UBE4B-202ENST00000343090 ARF6P62330 175 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 RELBQ01201 579 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 FAM216BQ8N7L0 139 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 ORAOV1Q8WV07 137 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 C18orf12Q96KH6 178 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 RABAC1Q9UI14 185 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 OR2T8A6NH00 312 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 A8MWL6 223 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 IL6RP08887 468 aaPredicted RBP6.79□□□□□ -1.32
UBE4B-202ENST00000343090 FCGR2BP31994 310 aaPredicted RBP6.79□□□□□ -1.32
UBE4B-202ENST00000343090 MC5RP33032 325 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 PRB3Q04118 309 aaPredicted RBP6.79□□□□□ -1.32
UBE4B-202ENST00000343090 LRRC75BQ2VPJ9 315 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 ACSF3Q4G176 576 aaPredicted RBP6.79□□□□□ -1.32
UBE4B-202ENST00000343090 TMEM177Q53S58 311 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 LOXL4Q96JB6 756 aa6.79□□□□□ -1.32
UBE4B-202ENST00000343090 TRBV9A0A0B4J1U6 114 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 IGKV1-12A0A0C4DH73 117 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 IGKV1D-12P01611 117 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 CD55P08174 381 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 ATP5G3P48201 142 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 ACTL10Q5JWF8 245 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 PCSK4Q6UW60 755 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 SPSB4Q96A44 273 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 RSPO3Q9BXY4 272 aaPredicted RBP6.78□□□□□ -1.32
UBE4B-202ENST00000343090 S4R3C0 116 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 GATA2P23769 480 aaPredicted RBP6.78□□□□□ -1.32
UBE4B-202ENST00000343090 LHX2P50458 406 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 CLDN18P56856 261 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 MGAMO43451 1857 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 ZNF318Q5VUA4 2279 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 OR4C46A6NHA9 309 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 CGAP01215 116 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 IGFBP2P18065 325 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 CCL1P22362 96 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 NMUP48645 174 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 WDR81Q562E7 1941 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 CENPWQ5EE01 88 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 LYRM7Q5U5X0 104 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 ZNF841Q6ZN19 808 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 PLSCR2Q9NRY7 297 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.78□□□□□ -1.32
UBE4B-202ENST00000343090 TMEM189A5PLL7 270 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 LEPROTL1O95214 131 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 FAM89BQ8N5H3 189 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 ZIC4Q8N9L1 334 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 SCNM1Q9BWG6 230 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 CACNA1DQ01668 2161 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 SCO2A0A1W2PP80 73 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 C1QTNF9BB2RNN3 333 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 ITGB1BP1O14713 200 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 RAMP3O60896 148 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 C1QTNF9P0C862 333 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 SELENOTP62341 195 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 AMMECR1LQ6DCA0 310 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 ZNF525Q8N782 197 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms