RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 FXYD3Q14802 87 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 EBLN2Q6P2I7 272 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 Q6ZR03 302 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 MIR17HGQ75NE6 70 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 SPACA3Q8IXA5 215 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 SLC24A4Q8NFF2 622 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 SAP25Q8TEE9 199 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 BCL2L2Q92843 193 aaPredicted RBP7.97□□□□□ -1.13
HOXA1-201ENST00000343060 NEUROG1Q92886 237 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 ZNF503Q96F45 646 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 TECRQ9NZ01 308 aaKnown RBP7.97□□□□□ -1.13
HOXA1-201ENST00000343060 SPINK4O60575 86 aa7.96□□□□□ -1.13
HOXA1-201ENST00000343060 ADH4P08319 380 aa7.96□□□□□ -1.13
HOXA1-201ENST00000343060 IGLL1P15814 213 aa7.96□□□□□ -1.13
HOXA1-201ENST00000343060 SSTR5P35346 364 aa7.96□□□□□ -1.13
HOXA1-201ENST00000343060 RAB31Q13636 194 aa7.96□□□□□ -1.13
HOXA1-201ENST00000343060 RTL8BQ17RB0 113 aa7.96□□□□□ -1.13
HOXA1-201ENST00000343060 IBA57Q5T440 356 aaKnown RBP7.96□□□□□ -1.13
HOXA1-201ENST00000343060 MRPL54Q6P161 138 aaKnown RBP7.96□□□□□ -1.13
HOXA1-201ENST00000343060 TRAT1Q6PIZ9 186 aa7.96□□□□□ -1.13
HOXA1-201ENST00000343060 MDP1Q86V88 176 aa7.96□□□□□ -1.13
HOXA1-201ENST00000343060 ATOH7Q8N100 152 aa7.96□□□□□ -1.13
HOXA1-201ENST00000343060 ABHD12Q8N2K0 398 aa7.96□□□□□ -1.13
HOXA1-201ENST00000343060 OR4C5Q8NGB2 326 aa7.96□□□□□ -1.13
HOXA1-201ENST00000343060 NANOS1Q8WY41 292 aaKnown RBP7.96□□□□□ -1.13
HOXA1-201ENST00000343060 GGTLC3B5MD39 225 aa7.96□□□□□ -1.14
HOXA1-201ENST00000343060 FCGR3BO75015 233 aa7.96□□□□□ -1.14
HOXA1-201ENST00000343060 NTF3P20783 257 aa7.96□□□□□ -1.14
HOXA1-201ENST00000343060 USF1P22415 310 aaPredicted RBP7.96□□□□□ -1.14
HOXA1-201ENST00000343060 TCL1AP56279 114 aa7.96□□□□□ -1.14
HOXA1-201ENST00000343060 ERVK-16P61578 105 aa7.96□□□□□ -1.14
HOXA1-201ENST00000343060 UBE2G1P62253 170 aa7.96□□□□□ -1.14
HOXA1-201ENST00000343060 TNXAQ16473 311 aa7.96□□□□□ -1.14
HOXA1-201ENST00000343060 FAM231DQ6ZW35 169 aa7.96□□□□□ -1.14
HOXA1-201ENST00000343060 FAM214BQ7L5A3 538 aa7.96□□□□□ -1.14
HOXA1-201ENST00000343060 OR13A1Q8NGR1 328 aa7.96□□□□□ -1.14
HOXA1-201ENST00000343060 CORO2AQ92828 525 aa7.96□□□□□ -1.14
HOXA1-201ENST00000343060 SAP30LQ9HAJ7 183 aa7.96□□□□□ -1.14
HOXA1-201ENST00000343060 MYO15AQ9UKN7 3530 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 A0A1W2PRE2 83 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 C15orf61A6NNL5 157 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 COL8A2P25067 703 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 NPY1RP25929 384 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 KIR2DS2P43631 304 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 GABRA2P47869 451 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 CYB561P49447 251 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 SLC35B1P78383 322 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 SRYQ05066 204 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 PSG5Q15238 335 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 TBC1D28Q2M2D7 210 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 ACP7Q6ZNF0 438 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 FAM90A1Q86YD7 464 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 C11orf53Q8IXP5 236 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 LOXL4Q96JB6 756 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 ST20Q9HBF5 79 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 TMEM140Q9NV12 185 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 PCSK5Q92824 1860 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 IGHV3-43A0A0B4J1X8 118 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 TRAV3A0A0B4J244 114 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 CRXO43186 299 aaPredicted RBP7.95□□□□□ -1.14
HOXA1-201ENST00000343060 IGHV3-43DP0DP04 118 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 IGFBP2P18065 325 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 GPR12P47775 334 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 ZNF331Q9NQX6 463 aaPredicted RBP7.95□□□□□ -1.14
HOXA1-201ENST00000343060 TNFRSF19Q9NS68 423 aa7.95□□□□□ -1.14
HOXA1-201ENST00000343060 FOXA2Q9Y261 457 aaPredicted RBP7.95□□□□□ -1.14
HOXA1-201ENST00000343060 WNT9BO14905 357 aa7.94□□□□□ -1.14
HOXA1-201ENST00000343060 HSBP1O75506 76 aa7.94□□□□□ -1.14
HOXA1-201ENST00000343060 CELA3AP09093 270 aa7.94□□□□□ -1.14
HOXA1-201ENST00000343060 CCL4P13236 92 aa7.94□□□□□ -1.14
HOXA1-201ENST00000343060 ALKBH6Q3KRA9 238 aa7.94□□□□□ -1.14
HOXA1-201ENST00000343060 FAM120AOSQ5T036 256 aa7.94□□□□□ -1.14
HOXA1-201ENST00000343060 GDF5OSQ5U4N7 250 aa7.94□□□□□ -1.14
HOXA1-201ENST00000343060 VWA1Q6PCB0 445 aa7.94□□□□□ -1.14
HOXA1-201ENST00000343060 DDB2Q92466 427 aa7.94□□□□□ -1.14
HOXA1-201ENST00000343060 FAM173AQ9BQD7 235 aa7.94□□□□□ -1.14
HOXA1-201ENST00000343060 TMEM14BQ9NUH8 114 aa7.94□□□□□ -1.14
HOXA1-201ENST00000343060 LOXL2Q9Y4K0 774 aa7.94□□□□□ -1.14
HOXA1-201ENST00000343060 R4GN57 208 aa7.94□□□□□ -1.14
HOXA1-201ENST00000343060 C21orf140B9A014 251 aa7.94□□□□□ -1.14
HOXA1-201ENST00000343060 NTN3O00634 580 aaPredicted RBP7.94□□□□□ -1.14
HOXA1-201ENST00000343060 TAX1BP3O14907 124 aa7.94□□□□□ -1.14
HOXA1-201ENST00000343060 SPINT2O43291 252 aa7.94□□□□□ -1.14
HOXA1-201ENST00000343060 REG1BP48304 166 aa7.94□□□□□ -1.14
HOXA1-201ENST00000343060 SPATA12Q7Z6I5 190 aa7.94□□□□□ -1.14
HOXA1-201ENST00000343060 NABP2Q9BQ15 211 aa7.94□□□□□ -1.14
HOXA1-201ENST00000343060 C19orf24Q9BVV8 132 aa7.94□□□□□ -1.14
HOXA1-201ENST00000343060 JPT1Q9UK76 154 aa7.94□□□□□ -1.14
HOXA1-201ENST00000343060 AHRRA9YTQ3 701 aa7.93□□□□□ -1.14
HOXA1-201ENST00000343060 J3QR06 171 aa7.93□□□□□ -1.14
HOXA1-201ENST00000343060 M0R2Z0 102 aa7.93□□□□□ -1.14
HOXA1-201ENST00000343060 GRPP07492 148 aa7.93□□□□□ -1.14
HOXA1-201ENST00000343060 Q56UQ5 140 aa7.93□□□□□ -1.14
HOXA1-201ENST00000343060 IFI44Q8TCB0 444 aa7.93□□□□□ -1.14
HOXA1-201ENST00000343060 OR2V2Q96R30 315 aa7.93□□□□□ -1.14
HOXA1-201ENST00000343060 B4GALT7Q9UBV7 327 aa7.93□□□□□ -1.14
HOXA1-201ENST00000343060 MRPS17Q9Y2R5 130 aaKnown RBP7.93□□□□□ -1.14
HOXA1-201ENST00000343060 DEFB108AA8MXU0 73 aa7.93□□□□□ -1.14
HOXA1-201ENST00000343060 M0R1X1 148 aa7.93□□□□□ -1.14
HOXA1-201ENST00000343060 TAS2R45P59539 299 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms