RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 HTR1DP28221 377 aa16.11■□□□□ 0.17
RTN1-202ENST00000342503 LCN2P80188 198 aa16.11■□□□□ 0.17
RTN1-202ENST00000342503 GUCA2BQ16661 112 aa16.11■□□□□ 0.17
RTN1-202ENST00000342503 MRGPRG-AS1Q2M3A8 158 aa16.11■□□□□ 0.17
RTN1-202ENST00000342503 TREML4Q6UXN2 200 aa16.11■□□□□ 0.17
RTN1-202ENST00000342503 C1orf122Q6ZSJ8 110 aa16.11■□□□□ 0.17
RTN1-202ENST00000342503 CLDND2Q8NHS1 167 aa16.11■□□□□ 0.17
RTN1-202ENST00000342503 CCL19Q99731 98 aa16.11■□□□□ 0.17
RTN1-202ENST00000342503 RARRES2Q99969 163 aa16.11■□□□□ 0.17
RTN1-202ENST00000342503 KIAA1456Q9P272 454 aa16.11■□□□□ 0.17
RTN1-202ENST00000342503 RBFOX3A6NFN3 312 aa16.1■□□□□ 0.17
RTN1-202ENST00000342503 CGB1A6NKQ9 187 aa16.1■□□□□ 0.17
RTN1-202ENST00000342503 ODF3BA8MYP8 253 aa16.1■□□□□ 0.17
RTN1-202ENST00000342503 PPT1P50897 306 aa16.1■□□□□ 0.17
RTN1-202ENST00000342503 LCN15Q6UWW0 184 aa16.1■□□□□ 0.17
RTN1-202ENST00000342503 VMO1Q7Z5L0 202 aa16.1■□□□□ 0.17
RTN1-202ENST00000342503 TEX45Q8NA69 505 aa16.1■□□□□ 0.17
RTN1-202ENST00000342503 RNASE2P10153 161 aaKnown RBP16.09■□□□□ 0.17
RTN1-202ENST00000342503 PDLIM4P50479 330 aa16.09■□□□□ 0.17
RTN1-202ENST00000342503 LMO4P61968 165 aa16.09■□□□□ 0.17
RTN1-202ENST00000342503 BSXQ3C1V8 233 aa16.09■□□□□ 0.17
RTN1-202ENST00000342503 C2orf83Q53S99 150 aa16.09■□□□□ 0.17
RTN1-202ENST00000342503 ARSJQ5FYB0 599 aaPredicted RBP16.09■□□□□ 0.17
RTN1-202ENST00000342503 C10orf55Q5SWW7 151 aa16.09■□□□□ 0.17
RTN1-202ENST00000342503 SVBPQ8N300 66 aa16.09■□□□□ 0.17
RTN1-202ENST00000342503 DPM3Q9P2X0 92 aa16.09■□□□□ 0.17
RTN1-202ENST00000342503 MPDU1O75352 247 aa16.08■□□□□ 0.17
RTN1-202ENST00000342503 MBP02144 154 aa16.08■□□□□ 0.17
RTN1-202ENST00000342503 CRYGBP07316 175 aa16.08■□□□□ 0.17
RTN1-202ENST00000342503 FGF8P55075 233 aaPredicted RBP16.08■□□□□ 0.17
RTN1-202ENST00000342503 PAX2Q02962 417 aa16.08■□□□□ 0.17
RTN1-202ENST00000342503 PSG5Q15238 335 aa16.08■□□□□ 0.17
RTN1-202ENST00000342503 HAGHQ16775 308 aa16.08■□□□□ 0.17
RTN1-202ENST00000342503 ZNF787Q6DD87 383 aa16.08■□□□□ 0.17
RTN1-202ENST00000342503 RPP25LQ8N5L8 163 aaKnown RBP16.08■□□□□ 0.17
RTN1-202ENST00000342503 MGST2Q99735 147 aa16.08■□□□□ 0.17
RTN1-202ENST00000342503 NPVFQ9HCQ7 196 aa16.08■□□□□ 0.17
RTN1-202ENST00000342503 A0A1W2PN81 502 aa16.08■□□□□ 0.16
RTN1-202ENST00000342503 A0A1W2PRD5 423 aa16.08■□□□□ 0.16
RTN1-202ENST00000342503 A0A1W2PRF3 423 aa16.08■□□□□ 0.16
RTN1-202ENST00000342503 A0A1W2PRM7 423 aa16.08■□□□□ 0.16
RTN1-202ENST00000342503 INS-IGF2F8WCM5 200 aa16.08■□□□□ 0.16
RTN1-202ENST00000342503 CHRNA7P36544 502 aa16.08■□□□□ 0.16
RTN1-202ENST00000342503 ATP5IP56385 69 aaPredicted RBP16.08■□□□□ 0.16
RTN1-202ENST00000342503 ERHP84090 104 aaKnown RBP16.08■□□□□ 0.16
RTN1-202ENST00000342503 BTN1A1Q13410 526 aa16.08■□□□□ 0.16
RTN1-202ENST00000342503 OR10G4Q8NGN3 311 aa16.08■□□□□ 0.16
RTN1-202ENST00000342503 OR10G9Q8NGN4 311 aa16.08■□□□□ 0.16
RTN1-202ENST00000342503 OR10G7Q8NGN6 311 aa16.08■□□□□ 0.16
RTN1-202ENST00000342503 C1orf159Q96HA4 380 aa16.08■□□□□ 0.16
RTN1-202ENST00000342503 NKX6-2Q9C056 277 aaPredicted RBP16.08■□□□□ 0.16
RTN1-202ENST00000342503 KPTNQ9Y664 436 aa16.08■□□□□ 0.16
RTN1-202ENST00000342503 IGHV2-70DA0A0C4DH43 119 aa16.07■□□□□ 0.16
RTN1-202ENST00000342503 TIMM23O14925 209 aa16.07■□□□□ 0.16
RTN1-202ENST00000342503 EIF3GO75821 320 aaKnown RBP eCLIP16.07■□□□□ 0.16
RTN1-202ENST00000342503 LHFPL4Q7Z7J7 247 aa16.07■□□□□ 0.16
RTN1-202ENST00000342503 SIRPDQ9H106 197 aa16.07■□□□□ 0.16
RTN1-202ENST00000342503 HILPDAQ9Y5L2 63 aa16.07■□□□□ 0.16
RTN1-202ENST00000342503 MAP1LC3B2A6NCE7 125 aa16.06■□□□□ 0.16
RTN1-202ENST00000342503 HOXB4P17483 251 aaPredicted RBP16.06■□□□□ 0.16
RTN1-202ENST00000342503 CEACAM3P40198 252 aa16.06■□□□□ 0.16
RTN1-202ENST00000342503 PRSS8Q16651 343 aa16.06■□□□□ 0.16
RTN1-202ENST00000342503 MMD2Q8IY49 270 aa16.06■□□□□ 0.16
RTN1-202ENST00000342503 MAP1LC3BQ9GZQ8 125 aa16.06■□□□□ 0.16
RTN1-202ENST00000342503 UNKLQ9H9P5 680 aaKnown RBP16.06■□□□□ 0.16
RTN1-202ENST00000342503 SLC39A9Q9NUM3 307 aa16.06■□□□□ 0.16
RTN1-202ENST00000342503 OPRK1P41145 380 aa16.05■□□□□ 0.16
RTN1-202ENST00000342503 WT1-ASQ06250 92 aa16.05■□□□□ 0.16
RTN1-202ENST00000342503 ICAM4Q14773 271 aa16.05■□□□□ 0.16
RTN1-202ENST00000342503 ACOT6Q3I5F7 207 aaPredicted RBP16.05■□□□□ 0.16
RTN1-202ENST00000342503 ZNF506Q5JVG8 444 aa16.05■□□□□ 0.16
RTN1-202ENST00000342503 FAM122CQ6P4D5 195 aa16.05■□□□□ 0.16
RTN1-202ENST00000342503 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.05■□□□□ 0.16
RTN1-202ENST00000342503 GGTLC1Q9BX51 225 aa16.05■□□□□ 0.16
RTN1-202ENST00000342503 SLC35B3Q9H1N7 401 aa16.05■□□□□ 0.16
RTN1-202ENST00000342503 SMDT1Q9H4I9 107 aa16.05■□□□□ 0.16
RTN1-202ENST00000342503 SLC25A22Q9H936 323 aa16.05■□□□□ 0.16
RTN1-202ENST00000342503 SIGLEC9Q9Y336 463 aa16.05■□□□□ 0.16
RTN1-202ENST00000342503 LSM4Q9Y4Z0 139 aaKnown RBP16.05■□□□□ 0.16
RTN1-202ENST00000342503 CTXND1A0A1B0GTU2 59 aa16.05■□□□□ 0.16
RTN1-202ENST00000342503 FNDC10F2Z333 226 aa16.05■□□□□ 0.16
RTN1-202ENST00000342503 M6PRP20645 277 aa16.05■□□□□ 0.16
RTN1-202ENST00000342503 CFHR4Q92496 578 aa16.05■□□□□ 0.16
RTN1-202ENST00000342503 RNF5Q99942 180 aa16.05■□□□□ 0.16
RTN1-202ENST00000342503 ACTR3CQ9C0K3 210 aaPredicted RBP16.05■□□□□ 0.16
RTN1-202ENST00000342503 GNG13Q9P2W3 67 aa16.05■□□□□ 0.16
RTN1-202ENST00000342503 METTL1Q9UBP6 276 aaKnown RBP16.05■□□□□ 0.16
RTN1-202ENST00000342503 DOPEY1Q5JWR5 2465 aa16.05■□□□□ 0.16
RTN1-202ENST00000342503 VENTXO95231 258 aa16.04■□□□□ 0.16
RTN1-202ENST00000342503 SRSF1Q07955 248 aaKnown RBP eCLIP16.04■□□□□ 0.16
RTN1-202ENST00000342503 TNXAQ16473 311 aa16.04■□□□□ 0.16
RTN1-202ENST00000342503 TEPPQ6URK8 271 aa16.04■□□□□ 0.16
RTN1-202ENST00000342503 LOC102723971A0A1B0GUV8 181 aa16.03■□□□□ 0.16
RTN1-202ENST00000342503 HMGB3O15347 200 aaKnown RBP16.03■□□□□ 0.16
RTN1-202ENST00000342503 SNAPINO95295 136 aa16.03■□□□□ 0.16
RTN1-202ENST00000342503 OR13C7P0DN81 318 aa16.03■□□□□ 0.16
RTN1-202ENST00000342503 PAX6P26367 422 aa16.03■□□□□ 0.16
RTN1-202ENST00000342503 NPBWR1P48145 328 aa16.03■□□□□ 0.16
RTN1-202ENST00000342503 MIC13Q5XKP0 118 aa16.03■□□□□ 0.16
RTN1-202ENST00000342503 RXFP4Q8TDU9 374 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms