RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 IL19Q9UHD0 177 aa11.34□□□□□ -0.59
TMEM248-201ENST00000341567 RAB29O14966 203 aa11.34□□□□□ -0.59
TMEM248-201ENST00000341567 SLC25A17O43808 307 aa11.34□□□□□ -0.59
TMEM248-201ENST00000341567 AMBPP02760 352 aa11.34□□□□□ -0.59
TMEM248-201ENST00000341567 CCL1P22362 96 aa11.34□□□□□ -0.59
TMEM248-201ENST00000341567 GCSAMLQ5JQS6 135 aa11.34□□□□□ -0.59
TMEM248-201ENST00000341567 PSMG3Q9BT73 122 aaPredicted RBP11.34□□□□□ -0.59
TMEM248-201ENST00000341567 NDUFAF3Q9BU61 184 aa11.34□□□□□ -0.59
TMEM248-201ENST00000341567 TFPI2P48307 235 aa11.34□□□□□ -0.59
TMEM248-201ENST00000341567 PAFAH1B2P68402 229 aa11.34□□□□□ -0.59
TMEM248-201ENST00000341567 BSPH1Q075Z2 132 aa11.34□□□□□ -0.59
TMEM248-201ENST00000341567 SRSF4Q08170 494 aaKnown RBP11.34□□□□□ -0.59
TMEM248-201ENST00000341567 MMD2Q8IY49 270 aa11.34□□□□□ -0.59
TMEM248-201ENST00000341567 OR4D5Q8NGN0 318 aa11.34□□□□□ -0.59
TMEM248-201ENST00000341567 TMSB15BA0A087X1C1 80 aa11.33□□□□□ -0.59
TMEM248-201ENST00000341567 FBLL1A6NHQ2 334 aaKnown RBP11.33□□□□□ -0.59
TMEM248-201ENST00000341567 LBHQ53QV2 105 aaPredicted RBP11.33□□□□□ -0.59
TMEM248-201ENST00000341567 FAM19A2Q8N3H0 131 aa11.33□□□□□ -0.59
TMEM248-201ENST00000341567 GTF3AQ92664 365 aaKnown RBP11.33□□□□□ -0.59
TMEM248-201ENST00000341567 TIMM9Q9Y5J7 89 aa11.33□□□□□ -0.59
TMEM248-201ENST00000341567 WIPF3A6NGB9 483 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 PRB4P10163 310 aaPredicted RBP11.33□□□□□ -0.6
TMEM248-201ENST00000341567 CD40P25942 277 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 KIR2DL2P43627 348 aaPredicted RBP11.33□□□□□ -0.6
TMEM248-201ENST00000341567 IBA57Q5T440 356 aaKnown RBP11.33□□□□□ -0.6
TMEM248-201ENST00000341567 ACP7Q6ZNF0 438 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 CCL3L1P16619 93 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 SSX8Q7RTT4 187 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 ZBTB34Q8NCN2 500 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 FAM122AQ96E09 287 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 ZNF714Q96N38 554 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 TMUB1Q9BVT8 246 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 NPCDR1Q9BY65 106 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 TMEM56-RWDD3S4R434 201 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 SCO2A0A1W2PP80 73 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 FAM90A10PA6NDY2 464 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 FAM90A18PA6NE21 464 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 FAM90A16PA6NEW6 464 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 FAM90A20PA6NIJ5 464 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 C19orf67A6NJJ6 358 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 FAM90A8PA6NJQ4 464 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 FAM90A7PA6NKC0 464 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 FAM90A22PA8MWA6 464 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 FAM90A12PA8MX19 464 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 FAM90A5PA8MXJ8 464 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 FAM90A23PA8MXZ1 464 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 PSPNO60542 156 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 FAM90A15PP0C7V4 464 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 FAM90A13PP0C7W8 464 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 FAM90A14PP0C7W9 464 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 FAM90A24PP0C7X0 464 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 CD99P14209 185 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 COL8A1P27658 744 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 GLRXP35754 106 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 LY6DQ14210 128 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 LINC00596Q86U02 117 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 PDPNQ86YL7 162 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 ZNF645Q8N7E2 425 aa11.33□□□□□ -0.6
TMEM248-201ENST00000341567 A6NNC1 897 aa11.32□□□□□ -0.6
TMEM248-201ENST00000341567 CSN1S1P47710 185 aa11.32□□□□□ -0.6
TMEM248-201ENST00000341567 JOSD1Q15040 202 aaPredicted RBP11.32□□□□□ -0.6
TMEM248-201ENST00000341567 LSM10Q969L4 123 aaKnown RBP11.32□□□□□ -0.6
TMEM248-201ENST00000341567 TMEM140Q9NV12 185 aa11.32□□□□□ -0.6
TMEM248-201ENST00000341567 OR51B2Q9Y5P1 312 aa11.32□□□□□ -0.6
TMEM248-201ENST00000341567 RAMP3O60896 148 aa11.32□□□□□ -0.6
TMEM248-201ENST00000341567 NUBP1P53384 320 aa11.32□□□□□ -0.6
TMEM248-201ENST00000341567 RPL24P83731 157 aaKnown RBP11.32□□□□□ -0.6
TMEM248-201ENST00000341567 TIMM23BQ5SRD1 257 aa11.32□□□□□ -0.6
TMEM248-201ENST00000341567 SMIM15Q7Z3B0 74 aa11.32□□□□□ -0.6
TMEM248-201ENST00000341567 VCANP13611 3396 aa11.32□□□□□ -0.6
TMEM248-201ENST00000341567 IGHV3OR16-10A0A075B7F0 116 aa11.32□□□□□ -0.6
TMEM248-201ENST00000341567 PRRX1P54821 245 aa11.32□□□□□ -0.6
TMEM248-201ENST00000341567 FOXA3P55318 350 aaPredicted RBP11.32□□□□□ -0.6
TMEM248-201ENST00000341567 EAF1Q96JC9 268 aaPredicted RBP11.32□□□□□ -0.6
TMEM248-201ENST00000341567 METRNQ9UJH8 293 aa11.32□□□□□ -0.6
TMEM248-201ENST00000341567 FAM162BQ5T6X4 162 aa11.31□□□□□ -0.6
TMEM248-201ENST00000341567 FAM53AQ6NSI3 398 aaPredicted RBP11.31□□□□□ -0.6
TMEM248-201ENST00000341567 MUC15Q8N387 334 aa11.31□□□□□ -0.6
TMEM248-201ENST00000341567 OR2T6Q8NHC8 308 aa11.31□□□□□ -0.6
TMEM248-201ENST00000341567 ST6GALNAC6Q969X2 333 aa11.31□□□□□ -0.6
TMEM248-201ENST00000341567 S4R3C0 116 aa11.31□□□□□ -0.6
TMEM248-201ENST00000341567 COL4A4P53420 1690 aaPredicted RBP11.31□□□□□ -0.6
TMEM248-201ENST00000341567 ZNF503-AS2A6NEH8 195 aa11.31□□□□□ -0.6
TMEM248-201ENST00000341567 GTF2H5Q6ZYL4 71 aa11.31□□□□□ -0.6
TMEM248-201ENST00000341567 MRPL37Q9BZE1 423 aaKnown RBP11.31□□□□□ -0.6
TMEM248-201ENST00000341567 TMEM191AQ9H0A3 160 aa11.31□□□□□ -0.6
TMEM248-201ENST00000341567 GSX1Q9H4S2 264 aaPredicted RBP11.31□□□□□ -0.6
TMEM248-201ENST00000341567 OR2J3O76001 311 aa11.31□□□□□ -0.6
TMEM248-201ENST00000341567 GATA2P23769 480 aaPredicted RBP11.31□□□□□ -0.6
TMEM248-201ENST00000341567 RSPO1Q2MKA7 263 aaPredicted RBP11.31□□□□□ -0.6
TMEM248-201ENST00000341567 SAXO1Q8IYX7 474 aa11.31□□□□□ -0.6
TMEM248-201ENST00000341567 PLSCR2Q9NRY7 297 aa11.31□□□□□ -0.6
TMEM248-201ENST00000341567 SERF1AO75920 110 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 P01737 135 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 PRR31Q5SQ13 230 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 PEAR1Q5VY43 1037 aaPredicted RBP11.3□□□□□ -0.6
TMEM248-201ENST00000341567 OR8B3Q8NGG8 313 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 OR8B2Q96RD0 313 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 CRIM1Q9NZV1 1036 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 TCF19Q9Y242 345 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms