RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 S100GP29377 79 aa15.3■□□□□ 0.04
SYNE2-201ENST00000341472 ETV6P41212 452 aa15.3■□□□□ 0.04
SYNE2-201ENST00000341472 GPHB5Q86YW7 130 aa15.3■□□□□ 0.04
SYNE2-201ENST00000341472 OR2K2Q8NGT1 345 aa15.3■□□□□ 0.04
SYNE2-201ENST00000341472 FCAMRQ8WWV6 532 aa15.3■□□□□ 0.04
SYNE2-201ENST00000341472 S100ZQ8WXG8 99 aa15.3■□□□□ 0.04
SYNE2-201ENST00000341472 CXorf58Q96LI9 332 aa15.3■□□□□ 0.04
SYNE2-201ENST00000341472 RCHY1Q96PM5 261 aa15.3■□□□□ 0.04
SYNE2-201ENST00000341472 QTRT1Q9BXR0 403 aaKnown RBP15.3■□□□□ 0.04
SYNE2-201ENST00000341472 C19orf73Q9NVV2 129 aa15.3■□□□□ 0.04
SYNE2-201ENST00000341472 S4R3C0 116 aa15.3■□□□□ 0.04
SYNE2-201ENST00000341472 IGLV11-55A0A075B6I3 123 aa15.29■□□□□ 0.04
SYNE2-201ENST00000341472 TEX50A0A1B0GTY4 177 aa15.29■□□□□ 0.04
SYNE2-201ENST00000341472 IGLC7A0M8Q6 106 aa15.29■□□□□ 0.04
SYNE2-201ENST00000341472 IZUMO1RA6ND01 250 aa15.29■□□□□ 0.04
SYNE2-201ENST00000341472 KRASP01116 189 aa15.29■□□□□ 0.04
SYNE2-201ENST00000341472 CLEC3BP05452 202 aa15.29■□□□□ 0.04
SYNE2-201ENST00000341472 TRAPPC2P0DI81 140 aa15.29■□□□□ 0.04
SYNE2-201ENST00000341472 TRAPPC2BP0DI82 140 aa15.29■□□□□ 0.04
SYNE2-201ENST00000341472 RCVRNP35243 200 aa15.29■□□□□ 0.04
SYNE2-201ENST00000341472 ARL3P36405 182 aa15.29■□□□□ 0.04
SYNE2-201ENST00000341472 FAM106AQ4KMX7 169 aa15.29■□□□□ 0.04
SYNE2-201ENST00000341472 ZNF585BQ52M93 769 aa15.29■□□□□ 0.04
SYNE2-201ENST00000341472 ADAMTSL5Q6ZMM2 481 aa15.29■□□□□ 0.04
SYNE2-201ENST00000341472 GTSCR1Q86UQ5 136 aa15.29■□□□□ 0.04
SYNE2-201ENST00000341472 CADM3Q8N126 398 aa15.29■□□□□ 0.04
SYNE2-201ENST00000341472 OR1L8Q8NGR8 309 aa15.29■□□□□ 0.04
SYNE2-201ENST00000341472 TRBV7-1A0A0A6YYK4 115 aa15.28■□□□□ 0.04
SYNE2-201ENST00000341472 MARCH11A6NNE9 402 aa15.28■□□□□ 0.04
SYNE2-201ENST00000341472 LGALS9O00182 355 aa15.28■□□□□ 0.04
SYNE2-201ENST00000341472 CYB5BO43169 146 aa15.28■□□□□ 0.04
SYNE2-201ENST00000341472 SNAPC5O75971 98 aa15.28■□□□□ 0.04
SYNE2-201ENST00000341472 FOLR2P14207 255 aa15.28■□□□□ 0.04
SYNE2-201ENST00000341472 IL18Q14116 193 aa15.28■□□□□ 0.04
SYNE2-201ENST00000341472 PHLDA2Q53GA4 152 aa15.28■□□□□ 0.04
SYNE2-201ENST00000341472 THOC7Q6I9Y2 204 aaKnown RBP15.28■□□□□ 0.04
SYNE2-201ENST00000341472 HSD17B13Q7Z5P4 300 aaPredicted RBP15.28■□□□□ 0.04
SYNE2-201ENST00000341472 OR10W1Q8NGF6 305 aa15.28■□□□□ 0.04
SYNE2-201ENST00000341472 DYNLRB2Q8TF09 96 aa15.28■□□□□ 0.04
SYNE2-201ENST00000341472 CCDC140Q96MF4 163 aa15.28■□□□□ 0.04
SYNE2-201ENST00000341472 SOSTQ9BQB4 213 aa15.28■□□□□ 0.04
SYNE2-201ENST00000341472 THAP7Q9BT49 309 aaPredicted RBP15.28■□□□□ 0.04
SYNE2-201ENST00000341472 FXYD6Q9H0Q3 95 aa15.28■□□□□ 0.04
SYNE2-201ENST00000341472 TUBA4BQ9H853 241 aa15.28■□□□□ 0.04
SYNE2-201ENST00000341472 THYN1Q9P016 225 aa15.28■□□□□ 0.04
SYNE2-201ENST00000341472 ZNF320A2RRD8 509 aa15.27■□□□□ 0.04
SYNE2-201ENST00000341472 C2orf70A6NJV1 201 aa15.27■□□□□ 0.04
SYNE2-201ENST00000341472 OR13C7P0DN81 318 aa15.27■□□□□ 0.04
SYNE2-201ENST00000341472 MRPS10P82664 201 aaKnown RBP15.27■□□□□ 0.04
SYNE2-201ENST00000341472 DEFB114Q30KQ6 69 aa15.27■□□□□ 0.04
SYNE2-201ENST00000341472 CD300EQ496F6 205 aaPredicted RBP15.27■□□□□ 0.04
SYNE2-201ENST00000341472 HINT2Q9BX68 163 aa15.27■□□□□ 0.04
SYNE2-201ENST00000341472 KMT2CQ8NEZ4 4911 aaKnown RBP15.26■□□□□ 0.03
SYNE2-201ENST00000341472 G6PCP35575 357 aa15.26■□□□□ 0.03
SYNE2-201ENST00000341472 UCP3P55916 312 aa15.26■□□□□ 0.03
SYNE2-201ENST00000341472 TSC22D3Q99576 134 aa15.26■□□□□ 0.03
SYNE2-201ENST00000341472 TECRQ9NZ01 308 aaKnown RBP15.26■□□□□ 0.03
SYNE2-201ENST00000341472 NSG2Q9Y328 171 aa15.26■□□□□ 0.03
SYNE2-201ENST00000341472 OR51B2Q9Y5P1 312 aa15.26■□□□□ 0.03
SYNE2-201ENST00000341472 MFSD2BA6NFX1 497 aa15.25■□□□□ 0.03
SYNE2-201ENST00000341472 ZNF785A8K8V0 405 aa15.25■□□□□ 0.03
SYNE2-201ENST00000341472 CTDSPLO15194 276 aa15.25■□□□□ 0.03
SYNE2-201ENST00000341472 IFNA6P05013 189 aa15.25■□□□□ 0.03
SYNE2-201ENST00000341472 SLC25A24Q6NUK1 477 aa15.25■□□□□ 0.03
SYNE2-201ENST00000341472 TBC1D26Q86UD7 250 aa15.25■□□□□ 0.03
SYNE2-201ENST00000341472 SLC38A6Q8IZM9 456 aa15.25■□□□□ 0.03
SYNE2-201ENST00000341472 TM2D3Q9BRN9 247 aa15.25■□□□□ 0.03
SYNE2-201ENST00000341472 NDUFA4L2Q9NRX3 87 aa15.25■□□□□ 0.03
SYNE2-201ENST00000341472 FAM212BQ9NTI7 297 aaPredicted RBP15.25■□□□□ 0.03
SYNE2-201ENST00000341472 FKBP11Q9NYL4 201 aa15.25■□□□□ 0.03
SYNE2-201ENST00000341472 PRNDQ9UKY0 176 aa15.25■□□□□ 0.03
SYNE2-201ENST00000341472 V9GYH0 126 aa15.25■□□□□ 0.03
SYNE2-201ENST00000341472 C3orf84H3BNL1 204 aa15.24■□□□□ 0.03
SYNE2-201ENST00000341472 SERPINE2P07093 398 aa15.24■□□□□ 0.03
SYNE2-201ENST00000341472 CBLN1P23435 193 aa15.24■□□□□ 0.03
SYNE2-201ENST00000341472 WT1-ASQ06250 92 aa15.24■□□□□ 0.03
SYNE2-201ENST00000341472 ZNF846Q147U1 533 aa15.24■□□□□ 0.03
SYNE2-201ENST00000341472 GDPD1Q8N9F7 314 aa15.24■□□□□ 0.03
SYNE2-201ENST00000341472 ZNF502Q8TBZ5 544 aa15.24■□□□□ 0.03
SYNE2-201ENST00000341472 VN1R17PQ8TDU5 208 aa15.24■□□□□ 0.03
SYNE2-201ENST00000341472 ABHD1Q96SE0 405 aa15.24■□□□□ 0.03
SYNE2-201ENST00000341472 WDR12Q9GZL7 423 aaKnown RBP15.24■□□□□ 0.03
SYNE2-201ENST00000341472 SLC2A8Q9NY64 477 aa15.24■□□□□ 0.03
SYNE2-201ENST00000341472 M0QYG6 137 aa15.23■□□□□ 0.03
SYNE2-201ENST00000341472 GUCA2BQ16661 112 aa15.23■□□□□ 0.03
SYNE2-201ENST00000341472 PYDC2Q56P42 97 aa15.23■□□□□ 0.03
SYNE2-201ENST00000341472 RNASE12Q5GAN4 147 aaKnown RBP15.23■□□□□ 0.03
SYNE2-201ENST00000341472 PLET1Q6UQ28 207 aa15.23■□□□□ 0.03
SYNE2-201ENST00000341472 LSM10Q969L4 123 aaKnown RBP15.23■□□□□ 0.03
SYNE2-201ENST00000341472 ZC4H2Q9NQZ6 224 aa15.23■□□□□ 0.03
SYNE2-201ENST00000341472 KLK11Q9UBX7 282 aa15.23■□□□□ 0.03
SYNE2-201ENST00000341472 GABARAPH6UMI1 98 aa15.22■□□□□ 0.03
SYNE2-201ENST00000341472 EDN2P20800 178 aa15.22■□□□□ 0.03
SYNE2-201ENST00000341472 GPR183P32249 361 aa15.22■□□□□ 0.03
SYNE2-201ENST00000341472 CD81P60033 236 aa15.22■□□□□ 0.03
SYNE2-201ENST00000341472 HAGHQ16775 308 aa15.22■□□□□ 0.03
SYNE2-201ENST00000341472 UXS1Q8NBZ7 420 aa15.22■□□□□ 0.03
SYNE2-201ENST00000341472 OR5B3Q8NH48 314 aa15.22■□□□□ 0.03
SYNE2-201ENST00000341472 OR52I2Q8NH67 350 aa15.22■□□□□ 0.03
SYNE2-201ENST00000341472 TMEM56Q96MV1 263 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms