RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 WDR83OSQ9Y284 106 aa8.07□□□□□ -1.12
TPM3-207ENST00000341372 WASHC3Q9Y3C0 194 aa8.07□□□□□ -1.12
TPM3-207ENST00000341372 ALG5Q9Y673 324 aa8.07□□□□□ -1.12
TPM3-207ENST00000341372 NCBP2LA6PVI3 153 aaKnown RBP8.06□□□□□ -1.12
TPM3-207ENST00000341372 INMT-MINDY4F8WBC2 141 aa8.06□□□□□ -1.12
TPM3-207ENST00000341372 SULT1C2O00338 296 aa8.06□□□□□ -1.12
TPM3-207ENST00000341372 NBR2O15453 112 aa8.06□□□□□ -1.12
TPM3-207ENST00000341372 KCNAB3O43448 404 aa8.06□□□□□ -1.12
TPM3-207ENST00000341372 NDUFB4O95168 129 aa8.06□□□□□ -1.12
TPM3-207ENST00000341372 CD28P10747 220 aa8.06□□□□□ -1.12
TPM3-207ENST00000341372 CDKN1BP46527 198 aa8.06□□□□□ -1.12
TPM3-207ENST00000341372 RAB25P57735 213 aa8.06□□□□□ -1.12
TPM3-207ENST00000341372 PDLIM3Q53GG5 364 aaPredicted RBP8.06□□□□□ -1.12
TPM3-207ENST00000341372 SLC35E3Q7Z769 313 aa8.06□□□□□ -1.12
TPM3-207ENST00000341372 OR4C16Q8NGL9 310 aa8.06□□□□□ -1.12
TPM3-207ENST00000341372 RITA1Q96K30 269 aa8.06□□□□□ -1.12
TPM3-207ENST00000341372 OR2W1Q9Y3N9 320 aa8.06□□□□□ -1.12
TPM3-207ENST00000341372 TMED3Q9Y3Q3 217 aa8.06□□□□□ -1.12
TPM3-207ENST00000341372 TRAV6A0A075B6T7 132 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 FAM90A26D6RGX4 464 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 M0R1X1 148 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 HLA-DRB1P01911 266 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 CD3DP04234 171 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 CNTFRP26992 372 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 NKX2-1P43699 371 aaPredicted RBP8.05□□□□□ -1.12
TPM3-207ENST00000341372 C5orf64Q2M2E5 130 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 NDUFA11Q86Y39 141 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 PDPNQ86YL7 162 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 OR5AU1Q8NGC0 362 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 OR6F1Q8NGZ6 308 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 ST6GAL2Q96JF0 529 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 RASL11BQ9BPW5 248 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 HSPB9Q9BQS6 159 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 NUDT15Q9NV35 164 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 DKK2Q9UBU2 259 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 TSPAN15O95858 294 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 PI3P19957 117 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 NFYAP23511 347 aaPredicted RBP8.05□□□□□ -1.12
TPM3-207ENST00000341372 HLA-DMAP28067 261 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 MSMO1Q15800 293 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 TCTEX1D4Q5JR98 221 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 TREML4Q6UXN2 200 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 FOXRED2Q8IWF2 684 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 STPG2Q8N412 459 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 ZNF645Q8N7E2 425 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 THAP8Q8NA92 274 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 DDB2Q92466 427 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 FAM210AQ96ND0 272 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 Q9H8V8 135 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 NUBP2Q9Y5Y2 271 aa8.05□□□□□ -1.12
TPM3-207ENST00000341372 C7orf66A4D0T2 115 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 PSMB11A5LHX3 300 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 LINC01548A6NM66 108 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 SLC22A5O76082 557 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 IGLV2-14P01704 120 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 APOA2P02652 100 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 CD74P04233 296 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 IGF1P05019 195 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 DUTP33316 252 aaKnown RBP8.04□□□□□ -1.12
TPM3-207ENST00000341372 THBS3P49746 956 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 LINC00205P59089 165 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 ARPC4P59998 168 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 HERV-K104P63124 156 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 SSBP1Q04837 148 aaKnown RBP8.04□□□□□ -1.12
TPM3-207ENST00000341372 GAGE2BQ13066 116 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 GAGE2EQ4V326 116 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 GAGE2AQ6NT46 116 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 CD164L2Q6UWJ8 174 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 C10orf99Q6UWK7 81 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 TMEM229BQ8NBD8 167 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 OR5AP2Q8NGF4 316 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 MRGPRFQ96AM1 343 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 TMEM18Q96B42 140 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 ADTRPQ96IZ2 230 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 NECAP2Q9NVZ3 263 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 GAGE2DQ9UEU5 116 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 ZNF107Q9UII5 783 aaPredicted RBP8.04□□□□□ -1.12
TPM3-207ENST00000341372 PLXNB1O43157 2135 aa8.04□□□□□ -1.12
TPM3-207ENST00000341372 IGKV1D-13A0A0B4J2D9 117 aa8.03□□□□□ -1.12
TPM3-207ENST00000341372 NAP1L6A6NFF2 107 aa8.03□□□□□ -1.12
TPM3-207ENST00000341372 CENPXA8MT69 81 aa8.03□□□□□ -1.12
TPM3-207ENST00000341372 IGKV1-16P04430 117 aa8.03□□□□□ -1.12
TPM3-207ENST00000341372 IGKV1-13P0DP09 117 aa8.03□□□□□ -1.12
TPM3-207ENST00000341372 NUP62P37198 522 aaPredicted RBP8.03□□□□□ -1.12
TPM3-207ENST00000341372 EIF4EBP1Q13541 118 aaPredicted RBP8.03□□□□□ -1.12
TPM3-207ENST00000341372 COMMD1Q8N668 190 aa8.03□□□□□ -1.12
TPM3-207ENST00000341372 OR4X2Q8NGF9 303 aa8.03□□□□□ -1.12
TPM3-207ENST00000341372 NOL4LQ96MY1 436 aaPredicted RBP8.03□□□□□ -1.12
TPM3-207ENST00000341372 IFT46Q9NQC8 304 aa8.03□□□□□ -1.12
TPM3-207ENST00000341372 RBM7Q9Y580 266 aaKnown RBP8.03□□□□□ -1.12
TPM3-207ENST00000341372 IGHV7-81A0A0B4J1V7 117 aa8.03□□□□□ -1.12
TPM3-207ENST00000341372 H7C2Y5 167 aa8.03□□□□□ -1.12
TPM3-207ENST00000341372 MPPED1O15442 326 aa8.03□□□□□ -1.12
TPM3-207ENST00000341372 CIDEAO60543 219 aa8.03□□□□□ -1.12
TPM3-207ENST00000341372 NDUFB6O95139 128 aa8.03□□□□□ -1.12
TPM3-207ENST00000341372 CRIP2P52943 208 aaPredicted RBP8.03□□□□□ -1.12
TPM3-207ENST00000341372 AP3S2P59780 193 aa8.03□□□□□ -1.12
TPM3-207ENST00000341372 CDK10Q15131 360 aa8.03□□□□□ -1.12
TPM3-207ENST00000341372 STEAP1BQ6NZ63 245 aa8.03□□□□□ -1.12
TPM3-207ENST00000341372 TSNAXQ99598 290 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms