RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 SNRPCP09234 159 aaKnown RBP10.79□□□□□ -0.68
DNMT1-201ENST00000340748 GAS1P54826 345 aa10.79□□□□□ -0.68
DNMT1-201ENST00000340748 FAM89BQ8N5H3 189 aa10.79□□□□□ -0.68
DNMT1-201ENST00000340748 HIST1H2BAQ96A08 127 aa10.79□□□□□ -0.68
DNMT1-201ENST00000340748 RCC1LQ96I51 464 aaKnown RBP10.79□□□□□ -0.68
DNMT1-201ENST00000340748 U3KQA8 63 aa10.79□□□□□ -0.68
DNMT1-201ENST00000340748 COL6A6A6NMZ7 2263 aa10.79□□□□□ -0.68
DNMT1-201ENST00000340748 EFNA4P52798 201 aa10.79□□□□□ -0.68
DNMT1-201ENST00000340748 SRSF9Q13242 221 aaKnown RBP eCLIP10.79□□□□□ -0.68
DNMT1-201ENST00000340748 MDS2Q8NDY4 140 aa10.79□□□□□ -0.68
DNMT1-201ENST00000340748 PGLYRP4Q96LB8 373 aa10.79□□□□□ -0.68
DNMT1-201ENST00000340748 TRAV14DV4A0A0A6YYC5 116 aa10.79□□□□□ -0.68
DNMT1-201ENST00000340748 A0A1W2PRX2 142 aa10.79□□□□□ -0.68
DNMT1-201ENST00000340748 RNF222A6NCQ9 220 aa10.79□□□□□ -0.68
DNMT1-201ENST00000340748 RPRMQ9NS64 109 aa10.79□□□□□ -0.68
DNMT1-201ENST00000340748 C17orf98A8MV24 154 aa10.79□□□□□ -0.68
DNMT1-201ENST00000340748 RELBQ01201 579 aa10.79□□□□□ -0.68
DNMT1-201ENST00000340748 OR4A47Q6IF82 309 aa10.79□□□□□ -0.68
DNMT1-201ENST00000340748 RTN4RQ9BZR6 473 aa10.79□□□□□ -0.68
DNMT1-201ENST00000340748 NAT1P18440 290 aa10.79□□□□□ -0.68
DNMT1-201ENST00000340748 CACNA1HO95180 2353 aa10.78□□□□□ -0.68
DNMT1-201ENST00000340748 CDX1P47902 265 aaPredicted RBP10.78□□□□□ -0.68
DNMT1-201ENST00000340748 OR4X2Q8NGF9 303 aa10.78□□□□□ -0.68
DNMT1-201ENST00000340748 LINC00312Q9Y6C7 94 aa10.78□□□□□ -0.68
DNMT1-201ENST00000340748 PRR32B1ATL7 298 aa10.78□□□□□ -0.68
DNMT1-201ENST00000340748 ANOS1P23352 680 aa10.78□□□□□ -0.68
DNMT1-201ENST00000340748 ZNF841Q6ZN19 808 aa10.78□□□□□ -0.68
DNMT1-201ENST00000340748 EAF1Q96JC9 268 aaPredicted RBP10.78□□□□□ -0.68
DNMT1-201ENST00000340748 C5orf52A6NGY3 159 aa10.78□□□□□ -0.68
DNMT1-201ENST00000340748 A8MXK9 166 aa10.78□□□□□ -0.68
DNMT1-201ENST00000340748 SMUG1Q53HV7 270 aa10.78□□□□□ -0.68
DNMT1-201ENST00000340748 RNFT1Q5M7Z0 435 aa10.78□□□□□ -0.68
DNMT1-201ENST00000340748 WDR25Q64LD2 544 aaPredicted RBP10.78□□□□□ -0.68
DNMT1-201ENST00000340748 Q96MF0 132 aa10.78□□□□□ -0.68
DNMT1-201ENST00000340748 MAP1LC3AQ9H492 121 aa10.78□□□□□ -0.68
DNMT1-201ENST00000340748 IGKV1-9A0A0C4DH69 117 aa10.78□□□□□ -0.68
DNMT1-201ENST00000340748 STAG3L2P0CL84 134 aa10.78□□□□□ -0.68
DNMT1-201ENST00000340748 TUBA4BQ9H853 241 aa10.78□□□□□ -0.68
DNMT1-201ENST00000340748 ANK1P16157 1881 aa10.77□□□□□ -0.68
DNMT1-201ENST00000340748 LINC00305Q7Z4B0 112 aa10.77□□□□□ -0.68
DNMT1-201ENST00000340748 ELOVL1Q9BW60 279 aa10.77□□□□□ -0.68
DNMT1-201ENST00000340748 CX3CL1P78423 397 aa10.77□□□□□ -0.69
DNMT1-201ENST00000340748 DTX1Q86Y01 620 aa10.77□□□□□ -0.69
DNMT1-201ENST00000340748 DOCK4Q8N1I0 1966 aa10.77□□□□□ -0.69
DNMT1-201ENST00000340748 C17orf100A8MU93 164 aa10.77□□□□□ -0.69
DNMT1-201ENST00000340748 SRSF12Q8WXF0 261 aaKnown RBP10.77□□□□□ -0.69
DNMT1-201ENST00000340748 DPM3Q9P2X0 92 aa10.77□□□□□ -0.69
DNMT1-201ENST00000340748 RNF223E7ERA6 249 aa10.77□□□□□ -0.69
DNMT1-201ENST00000340748 NPPCP23582 126 aa10.77□□□□□ -0.69
DNMT1-201ENST00000340748 COL5A1-AS1Q5SY13 56 aa10.77□□□□□ -0.69
DNMT1-201ENST00000340748 PLPPR1Q8TBJ4 325 aa10.77□□□□□ -0.69
DNMT1-201ENST00000340748 RP1P56715 2156 aa10.76□□□□□ -0.69
DNMT1-201ENST00000340748 CIDEAO60543 219 aa10.76□□□□□ -0.69
DNMT1-201ENST00000340748 LEPROTL1O95214 131 aa10.76□□□□□ -0.69
DNMT1-201ENST00000340748 SPATA45Q537H7 98 aa10.76□□□□□ -0.69
DNMT1-201ENST00000340748 CENPWQ5EE01 88 aa10.76□□□□□ -0.69
DNMT1-201ENST00000340748 SAPCD1Q5SSQ6 148 aa10.76□□□□□ -0.69
DNMT1-201ENST00000340748 CELA3BP08861 270 aa10.76□□□□□ -0.69
DNMT1-201ENST00000340748 FAM216BQ8N7L0 139 aa10.76□□□□□ -0.69
DNMT1-201ENST00000340748 RNASEH2CQ8TDP1 164 aaKnown RBP10.76□□□□□ -0.69
DNMT1-201ENST00000340748 CACNG8Q8WXS5 425 aa10.76□□□□□ -0.69
DNMT1-201ENST00000340748 GFI1Q99684 422 aa10.76□□□□□ -0.69
DNMT1-201ENST00000340748 YPEL1O60688 119 aa10.76□□□□□ -0.69
DNMT1-201ENST00000340748 GCSHP23434 173 aa10.76□□□□□ -0.69
DNMT1-201ENST00000340748 GPX4P36969 197 aaPredicted RBP10.76□□□□□ -0.69
DNMT1-201ENST00000340748 SRSF7Q16629 238 aaKnown RBP eCLIP10.76□□□□□ -0.69
DNMT1-201ENST00000340748 ZNF497Q6ZNH5 498 aa10.76□□□□□ -0.69
DNMT1-201ENST00000340748 YPEL2Q96QA6 119 aa10.76□□□□□ -0.69
DNMT1-201ENST00000340748 TTC28Q96AY4 2481 aa10.76□□□□□ -0.69
DNMT1-201ENST00000340748 IGKV3D-15A0A087WSY6 115 aa10.76□□□□□ -0.69
DNMT1-201ENST00000340748 SRP19P09132 144 aaKnown RBP10.76□□□□□ -0.69
DNMT1-201ENST00000340748 TDGF1P13385 188 aa10.76□□□□□ -0.69
DNMT1-201ENST00000340748 LYNX1G3V0Z9 82 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 IL4P05112 153 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 TRGC1P0CF51 173 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 LYNX1P0DP58 116 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 SLC25A16P16260 332 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 SRIP30626 198 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 IGFL3Q6UXB1 125 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 OR4C46A6NHA9 309 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 BTF3P20290 206 aaKnown RBP10.75□□□□□ -0.69
DNMT1-201ENST00000340748 CRYGSP22914 178 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 ZNF525Q8N782 197 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 RRHO14718 337 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 MOSP00540 346 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 TSPOP30536 169 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 TFPI2P48307 235 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 NMUP48645 174 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 TFF3Q07654 80 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 FAM53AQ6NSI3 398 aaPredicted RBP10.75□□□□□ -0.69
DNMT1-201ENST00000340748 PAQR4Q8N4S7 273 aaPredicted RBP10.75□□□□□ -0.69
DNMT1-201ENST00000340748 OR10S1Q8NGN2 331 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 SEMA5BQ9P283 1151 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 A0A087WWC5 75 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 A6NNC1 897 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 NPIPB6E9PJ23 425 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 FOLR2P14207 255 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 TCF24Q7RTU0 167 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 PHLDA3Q9Y5J5 127 aa10.75□□□□□ -0.69
DNMT1-201ENST00000340748 SIAH2O43255 324 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms