RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 FAM90A15PP0C7V4 464 aa12.75□□□□□ -0.37
LIMK2-203ENST00000340552 FAM90A13PP0C7W8 464 aa12.75□□□□□ -0.37
LIMK2-203ENST00000340552 FAM90A14PP0C7W9 464 aa12.75□□□□□ -0.37
LIMK2-203ENST00000340552 FAM90A24PP0C7X0 464 aa12.75□□□□□ -0.37
LIMK2-203ENST00000340552 LGALS7P47929 136 aa12.75□□□□□ -0.37
LIMK2-203ENST00000340552 MEOX1P50221 254 aa12.75□□□□□ -0.37
LIMK2-203ENST00000340552 UBE2G1P62253 170 aa12.75□□□□□ -0.37
LIMK2-203ENST00000340552 MRPL54Q6P161 138 aaKnown RBP12.75□□□□□ -0.37
LIMK2-203ENST00000340552 PTPRBP23467 1997 aa12.75□□□□□ -0.37
LIMK2-203ENST00000340552 URB1O60287 2271 aaKnown RBP12.75□□□□□ -0.37
LIMK2-203ENST00000340552 PATE4P0C8F1 98 aa12.75□□□□□ -0.37
LIMK2-203ENST00000340552 SRSF6Q13247 344 aaKnown RBP12.75□□□□□ -0.37
LIMK2-203ENST00000340552 ZNF718Q3SXZ3 478 aa12.75□□□□□ -0.37
LIMK2-203ENST00000340552 VWA1Q6PCB0 445 aa12.75□□□□□ -0.37
LIMK2-203ENST00000340552 SCCPDHQ8NBX0 429 aa12.75□□□□□ -0.37
LIMK2-203ENST00000340552 TXNDC17Q9BRA2 123 aa12.75□□□□□ -0.37
LIMK2-203ENST00000340552 OR2D2Q9H210 308 aa12.75□□□□□ -0.37
LIMK2-203ENST00000340552 KLRC4-KLRK1H3BQV0 150 aa12.75□□□□□ -0.37
LIMK2-203ENST00000340552 OR7C2O60412 319 aa12.75□□□□□ -0.37
LIMK2-203ENST00000340552 LINC00869P0C866 280 aa12.75□□□□□ -0.37
LIMK2-203ENST00000340552 COL8A2P25067 703 aa12.75□□□□□ -0.37
LIMK2-203ENST00000340552 NPY1RP25929 384 aa12.75□□□□□ -0.37
LIMK2-203ENST00000340552 FXYD3Q14802 87 aa12.75□□□□□ -0.37
LIMK2-203ENST00000340552 OR1B1Q8NGR6 318 aa12.75□□□□□ -0.37
LIMK2-203ENST00000340552 LIN7CQ9NUP9 197 aaKnown RBP12.75□□□□□ -0.37
LIMK2-203ENST00000340552 ZNF292O60281 2723 aa12.74□□□□□ -0.37
LIMK2-203ENST00000340552 J3QR06 171 aa12.74□□□□□ -0.37
LIMK2-203ENST00000340552 M0R2Z0 102 aa12.74□□□□□ -0.37
LIMK2-203ENST00000340552 NKX2-8O15522 239 aa12.74□□□□□ -0.37
LIMK2-203ENST00000340552 RBPJQ06330 500 aa12.74□□□□□ -0.37
LIMK2-203ENST00000340552 TCF24Q7RTU0 167 aa12.74□□□□□ -0.37
LIMK2-203ENST00000340552 SH3BGRL2Q9UJC5 107 aa12.74□□□□□ -0.37
LIMK2-203ENST00000340552 KCNS2Q9ULS6 477 aa12.74□□□□□ -0.37
LIMK2-203ENST00000340552 SELENOKQ9Y6D0 94 aa12.74□□□□□ -0.37
LIMK2-203ENST00000340552 AMY1AP04745 511 aa12.74□□□□□ -0.37
LIMK2-203ENST00000340552 FGF12P61328 243 aa12.74□□□□□ -0.37
LIMK2-203ENST00000340552 FAM27BQ5VT28 67 aa12.74□□□□□ -0.37
LIMK2-203ENST00000340552 OR1F12Q8NHA8 337 aa12.74□□□□□ -0.37
LIMK2-203ENST00000340552 WFDC12Q8WWY7 111 aa12.74□□□□□ -0.37
LIMK2-203ENST00000340552 RNASE7Q9H1E1 156 aaKnown RBP12.74□□□□□ -0.37
LIMK2-203ENST00000340552 C9JCJ5 164 aa12.73□□□□□ -0.37
LIMK2-203ENST00000340552 RAB29O14966 203 aa12.73□□□□□ -0.37
LIMK2-203ENST00000340552 CD5LO43866 347 aa12.73□□□□□ -0.37
LIMK2-203ENST00000340552 HSBP1O75506 76 aa12.73□□□□□ -0.37
LIMK2-203ENST00000340552 HLA-DQA1P01909 254 aa12.73□□□□□ -0.37
LIMK2-203ENST00000340552 STAG3L2P0CL84 134 aa12.73□□□□□ -0.37
LIMK2-203ENST00000340552 STAG3L3P0CL85 134 aa12.73□□□□□ -0.37
LIMK2-203ENST00000340552 NHLH1Q02575 133 aa12.73□□□□□ -0.37
LIMK2-203ENST00000340552 SLAQ13239 276 aa12.73□□□□□ -0.37
LIMK2-203ENST00000340552 SPINK9Q5DT21 86 aa12.73□□□□□ -0.37
LIMK2-203ENST00000340552 PRSS57Q6UWY2 283 aa12.73□□□□□ -0.37
LIMK2-203ENST00000340552 ZFHX2Q9C0A1 2572 aaPredicted RBP12.73□□□□□ -0.37
LIMK2-203ENST00000340552 MED12LQ86YW9 2145 aa12.73□□□□□ -0.37
LIMK2-203ENST00000340552 MUC6Q6W4X9 2439 aa12.73□□□□□ -0.37
LIMK2-203ENST00000340552 APCSP02743 223 aa12.73□□□□□ -0.37
LIMK2-203ENST00000340552 FGF23Q9GZV9 251 aaPredicted RBP12.73□□□□□ -0.37
LIMK2-203ENST00000340552 TECRQ9NZ01 308 aaKnown RBP12.73□□□□□ -0.37
LIMK2-203ENST00000340552 FREM1Q5H8C1 2179 aa12.72□□□□□ -0.37
LIMK2-203ENST00000340552 hDV102S1A0JD36 115 aa12.72□□□□□ -0.37
LIMK2-203ENST00000340552 LRP5LA4QPB2 252 aa12.72□□□□□ -0.37
LIMK2-203ENST00000340552 C3orf80F5H4A9 247 aa12.72□□□□□ -0.37
LIMK2-203ENST00000340552 C12orf54Q6X4T0 127 aa12.72□□□□□ -0.37
LIMK2-203ENST00000340552 DOLPP1Q86YN1 238 aa12.72□□□□□ -0.37
LIMK2-203ENST00000340552 OR1N2Q8NGR9 330 aa12.72□□□□□ -0.37
LIMK2-203ENST00000340552 UBALD1Q8TB05 177 aa12.72□□□□□ -0.37
LIMK2-203ENST00000340552 CPT1CQ8TCG5 803 aa12.72□□□□□ -0.37
LIMK2-203ENST00000340552 TMEM186Q96B77 213 aa12.72□□□□□ -0.37
LIMK2-203ENST00000340552 PEF1Q9UBV8 284 aaKnown RBP12.72□□□□□ -0.37
LIMK2-203ENST00000340552 OR4C46A6NHA9 309 aa12.72□□□□□ -0.37
LIMK2-203ENST00000340552 G6PCP35575 357 aa12.72□□□□□ -0.37
LIMK2-203ENST00000340552 NBL1P41271 181 aa12.72□□□□□ -0.37
LIMK2-203ENST00000340552 TMEM108Q6UXF1 575 aa12.72□□□□□ -0.37
LIMK2-203ENST00000340552 ST20Q9HBF5 79 aa12.72□□□□□ -0.37
LIMK2-203ENST00000340552 TMEM38BQ9NVV0 291 aa12.72□□□□□ -0.37
LIMK2-203ENST00000340552 CLEC5AQ9NY25 188 aa12.72□□□□□ -0.37
LIMK2-203ENST00000340552 WDR83OSQ9Y284 106 aa12.72□□□□□ -0.37
LIMK2-203ENST00000340552 LY96Q9Y6Y9 160 aa12.72□□□□□ -0.37
LIMK2-203ENST00000340552 ASPMQ8IZT6 3477 aa12.72□□□□□ -0.37
LIMK2-203ENST00000340552 FAM186AA6NE01 2351 aa12.72□□□□□ -0.37
LIMK2-203ENST00000340552 TRGV10A0A0A0MS01 117 aa12.71□□□□□ -0.37
LIMK2-203ENST00000340552 LRRC30A6NM36 301 aa12.71□□□□□ -0.37
LIMK2-203ENST00000340552 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.71□□□□□ -0.37
LIMK2-203ENST00000340552 CEACAM16Q2WEN9 425 aa12.71□□□□□ -0.37
LIMK2-203ENST00000340552 NINJ1Q92982 152 aa12.71□□□□□ -0.37
LIMK2-203ENST00000340552 MTCH1Q9NZJ7 389 aa12.71□□□□□ -0.37
LIMK2-203ENST00000340552 CXorf1O96002 111 aa12.71□□□□□ -0.38
LIMK2-203ENST00000340552 B4GALT1P15291 398 aa12.71□□□□□ -0.38
LIMK2-203ENST00000340552 WT1P19544 449 aaPredicted RBP12.71□□□□□ -0.38
LIMK2-203ENST00000340552 COX19Q49B96 90 aa12.71□□□□□ -0.38
LIMK2-203ENST00000340552 ZNF766Q5HY98 468 aa12.71□□□□□ -0.38
LIMK2-203ENST00000340552 ZNF841Q6ZN19 808 aa12.71□□□□□ -0.38
LIMK2-203ENST00000340552 C5orf17Q8NAS9 161 aa12.71□□□□□ -0.38
LIMK2-203ENST00000340552 FOXB1Q99853 325 aa12.71□□□□□ -0.38
LIMK2-203ENST00000340552 LOC400499M0QZD8 3231 aa12.71□□□□□ -0.38
LIMK2-203ENST00000340552 ZNF32P17041 273 aa12.7□□□□□ -0.38
LIMK2-203ENST00000340552 CCL11P51671 97 aa12.7□□□□□ -0.38
LIMK2-203ENST00000340552 SAMD13Q5VXD3 122 aa12.7□□□□□ -0.38
LIMK2-203ENST00000340552 UFSP1Q6NVU6 142 aa12.7□□□□□ -0.38
LIMK2-203ENST00000340552 SLC25A34Q6PIV7 304 aa12.7□□□□□ -0.38
LIMK2-203ENST00000340552 SLC25A40Q8TBP6 338 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms