RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 P01737 135 aa10.59□□□□□ -0.71
LIN54-201ENST00000340417 PIP4P2Q8N4L2 257 aa10.59□□□□□ -0.71
LIN54-201ENST00000340417 NEURL2Q9BR09 285 aa10.59□□□□□ -0.71
LIN54-201ENST00000340417 OTOGLQ3ZCN5 2332 aa10.59□□□□□ -0.71
LIN54-201ENST00000340417 AMY1AP04745 511 aa10.59□□□□□ -0.71
LIN54-201ENST00000340417 CFHR2P36980 270 aa10.59□□□□□ -0.71
LIN54-201ENST00000340417 TMEM249Q2WGJ8 235 aa10.59□□□□□ -0.71
LIN54-201ENST00000340417 PRR32B1ATL7 298 aa10.59□□□□□ -0.71
LIN54-201ENST00000340417 PSPNO60542 156 aa10.58□□□□□ -0.72
LIN54-201ENST00000340417 PLA2G2AP14555 144 aa10.58□□□□□ -0.72
LIN54-201ENST00000340417 CREBBPQ92793 2442 aa10.58□□□□□ -0.72
LIN54-201ENST00000340417 IGHV4-30-2A0A087WSY4 118 aa10.58□□□□□ -0.72
LIN54-201ENST00000340417 TRBV6-7A0A0A0MS04 114 aa10.58□□□□□ -0.72
LIN54-201ENST00000340417 MPDZO75970 2070 aa10.58□□□□□ -0.72
LIN54-201ENST00000340417 TUSC1Q2TAM9 212 aa10.58□□□□□ -0.72
LIN54-201ENST00000340417 ZNF585BQ52M93 769 aa10.58□□□□□ -0.72
LIN54-201ENST00000340417 MIC13Q5XKP0 118 aa10.58□□□□□ -0.72
LIN54-201ENST00000340417 MARVELD1Q9BSK0 173 aa10.58□□□□□ -0.72
LIN54-201ENST00000340417 PPP1R3EQ9H7J1 279 aa10.58□□□□□ -0.72
LIN54-201ENST00000340417 C11orf94C9JXX5 98 aa10.58□□□□□ -0.72
LIN54-201ENST00000340417 E9PQ18 207 aa10.58□□□□□ -0.72
LIN54-201ENST00000340417 UPK2O00526 184 aa10.58□□□□□ -0.72
LIN54-201ENST00000340417 RNF166Q96A37 237 aaPredicted RBP10.58□□□□□ -0.72
LIN54-201ENST00000340417 Q8TCH9 128 aa10.57□□□□□ -0.72
LIN54-201ENST00000340417 IGKV1-12A0A0C4DH73 117 aa10.57□□□□□ -0.72
LIN54-201ENST00000340417 IGKV1D-12P01611 117 aa10.57□□□□□ -0.72
LIN54-201ENST00000340417 IFI27L2Q9H2X8 130 aa10.57□□□□□ -0.72
LIN54-201ENST00000340417 PITX3O75364 302 aa10.57□□□□□ -0.72
LIN54-201ENST00000340417 USF2Q15853 346 aaPredicted RBP10.57□□□□□ -0.72
LIN54-201ENST00000340417 DPH3Q96FX2 82 aa10.57□□□□□ -0.72
LIN54-201ENST00000340417 C18orf12Q96KH6 178 aa10.57□□□□□ -0.72
LIN54-201ENST00000340417 PKDREJQ9NTG1 2253 aa10.57□□□□□ -0.72
LIN54-201ENST00000340417 TRAV14DV4A0A0A6YYC5 116 aa10.57□□□□□ -0.72
LIN54-201ENST00000340417 SNURFLB1AK76 121 aa10.57□□□□□ -0.72
LIN54-201ENST00000340417 GGCTO75223 188 aaKnown RBP10.57□□□□□ -0.72
LIN54-201ENST00000340417 CMC4P56277 68 aaPredicted RBP10.57□□□□□ -0.72
LIN54-201ENST00000340417 TP53RKQ96S44 253 aa10.57□□□□□ -0.72
LIN54-201ENST00000340417 PLSCR2Q9NRY7 297 aa10.57□□□□□ -0.72
LIN54-201ENST00000340417 MYLKQ15746 1914 aa10.57□□□□□ -0.72
LIN54-201ENST00000340417 C5orf63A6NC05 138 aa10.57□□□□□ -0.72
LIN54-201ENST00000340417 HOXA3O43365 443 aaPredicted RBP10.57□□□□□ -0.72
LIN54-201ENST00000340417 UBE2L6O14933 153 aa10.56□□□□□ -0.72
LIN54-201ENST00000340417 SUMO1P63165 101 aaKnown RBP10.56□□□□□ -0.72
LIN54-201ENST00000340417 A0A1B0GVG6 124 aa10.56□□□□□ -0.72
LIN54-201ENST00000340417 PPP1R2P9O14990 202 aa10.56□□□□□ -0.72
LIN54-201ENST00000340417 SAMD13Q5VXD3 122 aa10.56□□□□□ -0.72
LIN54-201ENST00000340417 ZNF660Q6AZW8 331 aaPredicted RBP10.56□□□□□ -0.72
LIN54-201ENST00000340417 DUX3Q96PT4 197 aa10.56□□□□□ -0.72
LIN54-201ENST00000340417 LINC01587Q99440 93 aa10.56□□□□□ -0.72
LIN54-201ENST00000340417 ELOA3CA0A087WX78 387 aaPredicted RBP10.56□□□□□ -0.72
LIN54-201ENST00000340417 PGPA6NDG6 321 aa10.56□□□□□ -0.72
LIN54-201ENST00000340417 PAX8Q06710 450 aa10.56□□□□□ -0.72
LIN54-201ENST00000340417 Q6ZNX1 250 aa10.56□□□□□ -0.72
LIN54-201ENST00000340417 C5orf66Q9H5L9 145 aa10.56□□□□□ -0.72
LIN54-201ENST00000340417 IGKV1-27A0A075B6S5 117 aa10.56□□□□□ -0.72
LIN54-201ENST00000340417 CTXND1A0A1B0GTU2 59 aa10.56□□□□□ -0.72
LIN54-201ENST00000340417 SEC14L6B5MCN3 397 aa10.56□□□□□ -0.72
LIN54-201ENST00000340417 H3BTX0 84 aa10.56□□□□□ -0.72
LIN54-201ENST00000340417 NHLH2Q02577 135 aa10.56□□□□□ -0.72
LIN54-201ENST00000340417 FABP9Q0Z7S8 132 aa10.56□□□□□ -0.72
LIN54-201ENST00000340417 SLC25A48Q6ZT89 311 aaKnown RBP10.56□□□□□ -0.72
LIN54-201ENST00000340417 ZNF257Q9Y2Q1 563 aa10.56□□□□□ -0.72
LIN54-201ENST00000340417 SPINK4O60575 86 aa10.55□□□□□ -0.72
LIN54-201ENST00000340417 CGAP01215 116 aa10.55□□□□□ -0.72
LIN54-201ENST00000340417 IGHV4-39P01824 125 aa10.55□□□□□ -0.72
LIN54-201ENST00000340417 TMEM187Q14656 261 aa10.55□□□□□ -0.72
LIN54-201ENST00000340417 FA2HQ7L5A8 372 aa10.55□□□□□ -0.72
LIN54-201ENST00000340417 ARID1AO14497 2285 aa10.55□□□□□ -0.72
LIN54-201ENST00000340417 G3V3Q6 166 aa10.55□□□□□ -0.72
LIN54-201ENST00000340417 SRSF10O75494 262 aaKnown RBP10.55□□□□□ -0.72
LIN54-201ENST00000340417 GATA4P43694 442 aa10.55□□□□□ -0.72
LIN54-201ENST00000340417 CYP2G1PQ6ZSU1 146 aa10.55□□□□□ -0.72
LIN54-201ENST00000340417 TMEM252Q8N6L7 170 aa10.55□□□□□ -0.72
LIN54-201ENST00000340417 GSX2Q9BZM3 304 aa10.55□□□□□ -0.72
LIN54-201ENST00000340417 FCER1GP30273 86 aa10.55□□□□□ -0.72
LIN54-201ENST00000340417 C1orf122Q6ZSJ8 110 aa10.55□□□□□ -0.72
LIN54-201ENST00000340417 TMEM167AQ8TBQ9 72 aa10.55□□□□□ -0.72
LIN54-201ENST00000340417 RPS11P62280 158 aaKnown RBP eCLIP10.55□□□□□ -0.72
LIN54-201ENST00000340417 GUK1Q16774 197 aa10.55□□□□□ -0.72
LIN54-201ENST00000340417 RNF5Q99942 180 aa10.55□□□□□ -0.72
LIN54-201ENST00000340417 ALX4Q9H161 411 aaPredicted RBP10.55□□□□□ -0.72
LIN54-201ENST00000340417 RNASEK-C17orf49H0YIS7 233 aa10.55□□□□□ -0.72
LIN54-201ENST00000340417 PAGE4O60829 102 aa10.55□□□□□ -0.72
LIN54-201ENST00000340417 OR2C1O95371 312 aa10.55□□□□□ -0.72
LIN54-201ENST00000340417 CD55P08174 381 aa10.55□□□□□ -0.72
LIN54-201ENST00000340417 C5orf64Q2M2E5 130 aa10.55□□□□□ -0.72
LIN54-201ENST00000340417 RNASEH2CQ8TDP1 164 aaKnown RBP10.55□□□□□ -0.72
LIN54-201ENST00000340417 IGHV4-61A0A0C4DH41 118 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 MFSD2BA6NFX1 497 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 SMAGPQ0VAQ4 97 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 ZNF324BQ6AW86 544 aaPredicted RBP10.54□□□□□ -0.72
LIN54-201ENST00000340417 FAM159AQ6UWV7 190 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 RPRMQ9NS64 109 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 DCAF16Q9NXF7 216 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 FREM3P0C091 2139 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 DLK1P80370 383 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 TMEM241Q24JQ0 296 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 LDLRAD3Q86YD5 345 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 COMMD1Q8N668 190 aa10.54□□□□□ -0.72
LIN54-201ENST00000340417 TMEM158Q8WZ71 300 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms