RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 INMT-MINDY4F8WBC2 141 aa12.04□□□□□ -0.48
SEC13-201ENST00000337354 PRAF2O60831 178 aa12.04□□□□□ -0.48
SEC13-201ENST00000337354 SLC25A6P12236 298 aa12.04□□□□□ -0.48
SEC13-201ENST00000337354 PSMB8P28062 276 aa12.04□□□□□ -0.48
SEC13-201ENST00000337354 AARDQ4LEZ3 155 aa12.04□□□□□ -0.48
SEC13-201ENST00000337354 NMSQ5H8A3 153 aa12.04□□□□□ -0.48
SEC13-201ENST00000337354 CXorf66Q5JRM2 361 aaPredicted RBP12.04□□□□□ -0.48
SEC13-201ENST00000337354 ASPHD1Q5U4P2 390 aa12.04□□□□□ -0.48
SEC13-201ENST00000337354 TMEM65Q6PI78 240 aa12.04□□□□□ -0.48
SEC13-201ENST00000337354 Q6ZRM9 215 aa12.04□□□□□ -0.48
SEC13-201ENST00000337354 MRPL41Q8IXM3 137 aaKnown RBP12.04□□□□□ -0.48
SEC13-201ENST00000337354 OR52E5Q8NH55 327 aa12.04□□□□□ -0.48
SEC13-201ENST00000337354 ZNF431Q8TF32 576 aaPredicted RBP12.04□□□□□ -0.48
SEC13-201ENST00000337354 PDCD10Q9BUL8 212 aa12.04□□□□□ -0.48
SEC13-201ENST00000337354 TENM1Q9UKZ4 2725 aa12.03□□□□□ -0.48
SEC13-201ENST00000337354 ANK2Q01484 3957 aa12.03□□□□□ -0.48
SEC13-201ENST00000337354 CGB1A6NKQ9 187 aa12.03□□□□□ -0.48
SEC13-201ENST00000337354 DBX1A6NMT0 343 aa12.03□□□□□ -0.48
SEC13-201ENST00000337354 NPIPB5A8MRT5 1133 aa12.03□□□□□ -0.48
SEC13-201ENST00000337354 DHFRP00374 187 aa12.03□□□□□ -0.48
SEC13-201ENST00000337354 CRYGCP07315 174 aa12.03□□□□□ -0.48
SEC13-201ENST00000337354 SULT1A3P0DMM9 295 aa12.03□□□□□ -0.48
SEC13-201ENST00000337354 SULT1A4P0DMN0 295 aa12.03□□□□□ -0.48
SEC13-201ENST00000337354 CD28P10747 220 aa12.03□□□□□ -0.48
SEC13-201ENST00000337354 IZUMO4Q1ZYL8 232 aa12.03□□□□□ -0.48
SEC13-201ENST00000337354 C10orf99Q6UWK7 81 aa12.03□□□□□ -0.48
SEC13-201ENST00000337354 FAM110DQ8TAY7 271 aaPredicted RBP12.03□□□□□ -0.48
SEC13-201ENST00000337354 SLA2Q9H6Q3 261 aa12.03□□□□□ -0.48
SEC13-201ENST00000337354 GPN1Q9HCN4 374 aaPredicted RBP12.03□□□□□ -0.48
SEC13-201ENST00000337354 TSSC4Q9Y5U2 329 aaPredicted RBP12.03□□□□□ -0.48
SEC13-201ENST00000337354 A0A1B0GW64 132 aa12.02□□□□□ -0.49
SEC13-201ENST00000337354 TCRBV4S1A1TA0A5B7 111 aa12.02□□□□□ -0.49
SEC13-201ENST00000337354 HMX3A6NHT5 357 aa12.02□□□□□ -0.49
SEC13-201ENST00000337354 SOX15O60248 233 aa12.02□□□□□ -0.49
SEC13-201ENST00000337354 IFNA21P01568 189 aa12.02□□□□□ -0.49
SEC13-201ENST00000337354 MYOD1P15172 320 aa12.02□□□□□ -0.49
SEC13-201ENST00000337354 RAB9AP51151 201 aa12.02□□□□□ -0.49
SEC13-201ENST00000337354 PRCDQ00LT1 54 aa12.02□□□□□ -0.49
SEC13-201ENST00000337354 SMCO1Q147U7 214 aa12.02□□□□□ -0.49
SEC13-201ENST00000337354 TCTEX1D4Q5JR98 221 aa12.02□□□□□ -0.49
SEC13-201ENST00000337354 C11orf44Q8N8P7 122 aa12.02□□□□□ -0.49
SEC13-201ENST00000337354 OR5T1Q8NG75 326 aa12.02□□□□□ -0.49
SEC13-201ENST00000337354 CACNG5Q9UF02 275 aa12.02□□□□□ -0.49
SEC13-201ENST00000337354 IGLC7A0M8Q6 106 aa12.01□□□□□ -0.49
SEC13-201ENST00000337354 SNRPGP15A8MWD9 76 aa12.01□□□□□ -0.49
SEC13-201ENST00000337354 INS-IGF2F8WCM5 200 aa12.01□□□□□ -0.49
SEC13-201ENST00000337354 ST8SIA3O43173 380 aa12.01□□□□□ -0.49
SEC13-201ENST00000337354 IFNA17P01571 189 aa12.01□□□□□ -0.49
SEC13-201ENST00000337354 HOXB5P09067 269 aa12.01□□□□□ -0.49
SEC13-201ENST00000337354 PF4V1P10720 104 aa12.01□□□□□ -0.49
SEC13-201ENST00000337354 PSMB6P28072 239 aa12.01□□□□□ -0.49
SEC13-201ENST00000337354 SPCS3P61009 180 aa12.01□□□□□ -0.49
SEC13-201ENST00000337354 SRSF4Q08170 494 aaKnown RBP12.01□□□□□ -0.49
SEC13-201ENST00000337354 RGS21Q2M5E4 152 aa12.01□□□□□ -0.49
SEC13-201ENST00000337354 PDLIM3Q53GG5 364 aaPredicted RBP12.01□□□□□ -0.49
SEC13-201ENST00000337354 NDUFA11Q86Y39 141 aa12.01□□□□□ -0.49
SEC13-201ENST00000337354 OR52B4Q8NGK2 314 aa12.01□□□□□ -0.49
SEC13-201ENST00000337354 CITED2Q99967 270 aaPredicted RBP12.01□□□□□ -0.49
SEC13-201ENST00000337354 HINT2Q9BX68 163 aa12.01□□□□□ -0.49
SEC13-201ENST00000337354 ZNF355PQ9NSJ1 428 aa12.01□□□□□ -0.49
SEC13-201ENST00000337354 CYB5BO43169 146 aa12□□□□□ -0.49
SEC13-201ENST00000337354 APELAP0DMC3 54 aa12□□□□□ -0.49
SEC13-201ENST00000337354 CTRB1P17538 263 aa12□□□□□ -0.49
SEC13-201ENST00000337354 CDX1P47902 265 aaPredicted RBP12□□□□□ -0.49
SEC13-201ENST00000337354 ERHP84090 104 aaKnown RBP12□□□□□ -0.49
SEC13-201ENST00000337354 GGNBP1Q5YKI7 109 aa12□□□□□ -0.49
SEC13-201ENST00000337354 CTRB2Q6GPI1 263 aa12□□□□□ -0.49
SEC13-201ENST00000337354 C12orf45Q8N5I9 185 aaPredicted RBP12□□□□□ -0.49
SEC13-201ENST00000337354 OR1L6Q8NGR2 347 aa12□□□□□ -0.49
SEC13-201ENST00000337354 UBE2E2Q96LR5 201 aa12□□□□□ -0.49
SEC13-201ENST00000337354 SEC22CQ9BRL7 303 aa12□□□□□ -0.49
SEC13-201ENST00000337354 KLK15Q9H2R5 256 aa12□□□□□ -0.49
SEC13-201ENST00000337354 PLEKHA3Q9HB20 300 aa12□□□□□ -0.49
SEC13-201ENST00000337354 A0A0G2JLM5 398 aa11.99□□□□□ -0.49
SEC13-201ENST00000337354 PITX3O75364 302 aa11.99□□□□□ -0.49
SEC13-201ENST00000337354 RPLP1P05386 114 aaKnown RBP11.99□□□□□ -0.49
SEC13-201ENST00000337354 OR13C7P0DN81 318 aa11.99□□□□□ -0.49
SEC13-201ENST00000337354 DEFA4P12838 97 aa11.99□□□□□ -0.49
SEC13-201ENST00000337354 AREGP15514 252 aa11.99□□□□□ -0.49
SEC13-201ENST00000337354 HIST1H1BP16401 226 aaKnown RBP11.99□□□□□ -0.49
SEC13-201ENST00000337354 WT1-ASQ06250 92 aa11.99□□□□□ -0.49
SEC13-201ENST00000337354 KLK9Q2XQG4 91 aa11.99□□□□□ -0.49
SEC13-201ENST00000337354 OR10W1Q8NGF6 305 aa11.99□□□□□ -0.49
SEC13-201ENST00000337354 MYOZ3Q8TDC0 251 aa11.99□□□□□ -0.49
SEC13-201ENST00000337354 KLK9Q9UKQ9 250 aa11.99□□□□□ -0.49
SEC13-201ENST00000337354 TRBV9A0A0B4J1U6 114 aa11.98□□□□□ -0.49
SEC13-201ENST00000337354 FAM90A26D6RGX4 464 aa11.98□□□□□ -0.49
SEC13-201ENST00000337354 ADAP1O75689 374 aa11.98□□□□□ -0.49
SEC13-201ENST00000337354 TRGV3P03979 118 aa11.98□□□□□ -0.49
SEC13-201ENST00000337354 RPL23AP62750 156 aaKnown RBP11.98□□□□□ -0.49
SEC13-201ENST00000337354 OR2C3Q8N628 320 aa11.98□□□□□ -0.49
SEC13-201ENST00000337354 ZNF491Q8N8L2 437 aa11.98□□□□□ -0.49
SEC13-201ENST00000337354 OR1S1Q8NH92 325 aa11.98□□□□□ -0.49
SEC13-201ENST00000337354 USMG5Q96IX5 58 aa11.98□□□□□ -0.49
SEC13-201ENST00000337354 MS4A10Q96PG2 267 aa11.98□□□□□ -0.49
SEC13-201ENST00000337354 ENY2Q9NPA8 101 aa11.98□□□□□ -0.49
SEC13-201ENST00000337354 THYN1Q9P016 225 aa11.98□□□□□ -0.49
SEC13-201ENST00000337354 HSPB7Q9UBY9 170 aa11.98□□□□□ -0.49
SEC13-201ENST00000337354 FAM223BA6NKX1 122 aa11.97□□□□□ -0.49
SEC13-201ENST00000337354 SPNP16150 400 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms